RNA–Protein interactions for RNA: ENST00000467104.2

BPTF-206, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-206ENST00000467104 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
BPTF-206ENST00000467104 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
BPTF-206ENST00000467104 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
BPTF-206ENST00000467104 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
BPTF-206ENST00000467104 FOXD1Q16676 465 aa17.05■□□□□ 0.32
BPTF-206ENST00000467104 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
BPTF-206ENST00000467104 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
BPTF-206ENST00000467104 ADRA2BP18089 450 aa16.23■□□□□ 0.19
BPTF-206ENST00000467104 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
BPTF-206ENST00000467104 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.16
BPTF-206ENST00000467104 MSH5O43196 834 aa15.82■□□□□ 0.12
BPTF-206ENST00000467104 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
BPTF-206ENST00000467104 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
BPTF-206ENST00000467104 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
BPTF-206ENST00000467104 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
BPTF-206ENST00000467104 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
BPTF-206ENST00000467104 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
BPTF-206ENST00000467104 KCNA4P22459 653 aa14.36□□□□□ -0.11
BPTF-206ENST00000467104 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
BPTF-206ENST00000467104 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
BPTF-206ENST00000467104 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
BPTF-206ENST00000467104 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
BPTF-206ENST00000467104 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
BPTF-206ENST00000467104 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
BPTF-206ENST00000467104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.241e-8■□□□□ 11
BPTF-206ENST00000467104 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
BPTF-206ENST00000467104 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
BPTF-206ENST00000467104 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
BPTF-206ENST00000467104 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
BPTF-206ENST00000467104 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
BPTF-206ENST00000467104 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
BPTF-206ENST00000467104 ZBTB22O15209 634 aa13.22□□□□□ -0.29
BPTF-206ENST00000467104 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
BPTF-206ENST00000467104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
BPTF-206ENST00000467104 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
BPTF-206ENST00000467104 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
BPTF-206ENST00000467104 APLP2Q06481 763 aa13.08□□□□□ -0.32
BPTF-206ENST00000467104 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
BPTF-206ENST00000467104 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
BPTF-206ENST00000467104 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
BPTF-206ENST00000467104 CAPN15O75808 1086 aa12.94□□□□□ -0.34
BPTF-206ENST00000467104 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
BPTF-206ENST00000467104 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
BPTF-206ENST00000467104 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
BPTF-206ENST00000467104 DSG3P32926 999 aa12.81□□□□□ -0.36
BPTF-206ENST00000467104 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
BPTF-206ENST00000467104 ABCB7O75027 752 aa12.66□□□□□ -0.38
BPTF-206ENST00000467104 POLA2Q14181 598 aa12.63□□□□□ -0.39
BPTF-206ENST00000467104 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
BPTF-206ENST00000467104 POTEHQ6S545 545 aa12.44□□□□□ -0.42
BPTF-206ENST00000467104 FBLN2P98095 1184 aa12.31□□□□□ -0.44
BPTF-206ENST00000467104 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
BPTF-206ENST00000467104 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
BPTF-206ENST00000467104 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
BPTF-206ENST00000467104 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
BPTF-206ENST00000467104 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
BPTF-206ENST00000467104 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
BPTF-206ENST00000467104 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
BPTF-206ENST00000467104 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
BPTF-206ENST00000467104 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
BPTF-206ENST00000467104 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
BPTF-206ENST00000467104 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
BPTF-206ENST00000467104 PABPN1Q86U42 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
BPTF-206ENST00000467104 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
BPTF-206ENST00000467104 FKBP8Q14318 412 aa11.76□□□□□ -0.53
BPTF-206ENST00000467104 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
BPTF-206ENST00000467104 PROM2Q8N271 834 aa11.76□□□□□ -0.53
BPTF-206ENST00000467104 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
BPTF-206ENST00000467104 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
BPTF-206ENST00000467104 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
BPTF-206ENST00000467104 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■□□□□ 10.5
BPTF-206ENST00000467104 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
BPTF-206ENST00000467104 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
BPTF-206ENST00000467104 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
BPTF-206ENST00000467104 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
BPTF-206ENST00000467104 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
BPTF-206ENST00000467104 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
BPTF-206ENST00000467104 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
BPTF-206ENST00000467104 MIER1Q8N108 512 aa11.3□□□□□ -0.6
BPTF-206ENST00000467104 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
BPTF-206ENST00000467104 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
BPTF-206ENST00000467104 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
BPTF-206ENST00000467104 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
BPTF-206ENST00000467104 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
BPTF-206ENST00000467104 C19orf67A6NJJ6 358 aa11.21□□□□□ -0.61
BPTF-206ENST00000467104 HAX1O00165 279 aa11.21□□□□□ -0.61
BPTF-206ENST00000467104 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
BPTF-206ENST00000467104 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
BPTF-206ENST00000467104 CD44P16070 742 aaKnown RBP11.12□□□□□ -0.63
BPTF-206ENST00000467104 EVX2Q03828 476 aa11.11□□□□□ -0.63
BPTF-206ENST00000467104 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
BPTF-206ENST00000467104 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
BPTF-206ENST00000467104 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
BPTF-206ENST00000467104 NUBP1P53384 320 aa11.06□□□□□ -0.64
BPTF-206ENST00000467104 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
BPTF-206ENST00000467104 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
BPTF-206ENST00000467104 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
BPTF-206ENST00000467104 SPOCK2Q92563 424 aa11□□□□□ -0.65
BPTF-206ENST00000467104 CLCN6P51797 869 aa10.99□□□□□ -0.65
BPTF-206ENST00000467104 FAM212AQ96EL1 285 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms