RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, humanhuman

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM17-208ENST00000467080 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
RBM17-208ENST00000467080 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
RBM17-208ENST00000467080 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
RBM17-208ENST00000467080 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
RBM17-208ENST00000467080 PLPPR3Q6T4P5 718 aa23.33■■□□□ 1.33
RBM17-208ENST00000467080 FOXD1Q16676 465 aa23.18■■□□□ 1.3
RBM17-208ENST00000467080 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
RBM17-208ENST00000467080 ADRA2BP18089 450 aa22.31■■□□□ 1.16
RBM17-208ENST00000467080 PIAS4Q8N2W9 510 aaPredicted RBP21.85■■□□□ 1.09
RBM17-208ENST00000467080 MSH5O43196 834 aa21.35■■□□□ 1.01
RBM17-208ENST00000467080 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
RBM17-208ENST00000467080 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
RBM17-208ENST00000467080 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
RBM17-208ENST00000467080 KCNA4P22459 653 aa20.12■□□□□ 0.81
RBM17-208ENST00000467080 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
RBM17-208ENST00000467080 CNKSR2Q8WXI2 1034 aa19.98■□□□□ 0.79
RBM17-208ENST00000467080 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
RBM17-208ENST00000467080 NPM3O75607 178 aaKnown RBP19.75■□□□□ 0.75
RBM17-208ENST00000467080 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
RBM17-208ENST00000467080 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
RBM17-208ENST00000467080 POTEDQ86YR6 584 aa19.45■□□□□ 0.7
RBM17-208ENST00000467080 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
RBM17-208ENST00000467080 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
RBM17-208ENST00000467080 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
RBM17-208ENST00000467080 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
RBM17-208ENST00000467080 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
RBM17-208ENST00000467080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.573e-8■■■□□ 15.7
RBM17-208ENST00000467080 ZBTB22O15209 634 aa18.52■□□□□ 0.56
RBM17-208ENST00000467080 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
RBM17-208ENST00000467080 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
RBM17-208ENST00000467080 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
RBM17-208ENST00000467080 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
RBM17-208ENST00000467080 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
RBM17-208ENST00000467080 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
RBM17-208ENST00000467080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
RBM17-208ENST00000467080 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
RBM17-208ENST00000467080 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
RBM17-208ENST00000467080 APLP2Q06481 763 aa17.85■□□□□ 0.45
RBM17-208ENST00000467080 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
RBM17-208ENST00000467080 ATXN8OSP0DMR3 200 aa17.83■□□□□ 0.44
RBM17-208ENST00000467080 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
RBM17-208ENST00000467080 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
RBM17-208ENST00000467080 CAPN15O75808 1086 aa17.74■□□□□ 0.43
RBM17-208ENST00000467080 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
RBM17-208ENST00000467080 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
RBM17-208ENST00000467080 DSG3P32926 999 aa17.43■□□□□ 0.38
RBM17-208ENST00000467080 ABCB7O75027 752 aa17.41■□□□□ 0.38
RBM17-208ENST00000467080 POLA2Q14181 598 aa17.37■□□□□ 0.37
RBM17-208ENST00000467080 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
RBM17-208ENST00000467080 FBLN2P98095 1184 aa17■□□□□ 0.31
RBM17-208ENST00000467080 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
RBM17-208ENST00000467080 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
RBM17-208ENST00000467080 FKBP8Q14318 412 aa16.64■□□□□ 0.25
RBM17-208ENST00000467080 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
RBM17-208ENST00000467080 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
RBM17-208ENST00000467080 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
RBM17-208ENST00000467080 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
RBM17-208ENST00000467080 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
RBM17-208ENST00000467080 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
RBM17-208ENST00000467080 SSUH2Q9Y2M2 353 aa16.47■□□□□ 0.23
RBM17-208ENST00000467080 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
RBM17-208ENST00000467080 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
RBM17-208ENST00000467080 PROM2Q8N271 834 aa16.31■□□□□ 0.2
RBM17-208ENST00000467080 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
RBM17-208ENST00000467080 SPDYE1Q8NFV5 336 aaPredicted RBP16.11■□□□□ 0.17
RBM17-208ENST00000467080 PITPNM1O00562 1244 aa16.07■□□□□ 0.16
RBM17-208ENST00000467080 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
RBM17-208ENST00000467080 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
RBM17-208ENST00000467080 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
RBM17-208ENST00000467080 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
RBM17-208ENST00000467080 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
RBM17-208ENST00000467080 VASPP50552 380 aaPredicted RBP15.82■□□□□ 0.12
RBM17-208ENST00000467080 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
RBM17-208ENST00000467080 MIER1Q8N108 512 aa15.76■□□□□ 0.11
RBM17-208ENST00000467080 PLCD3Q8N3E9 789 aa15.73■□□□□ 0.11
RBM17-208ENST00000467080 PIP4P2Q8N4L2 257 aa15.72■□□□□ 0.11
RBM17-208ENST00000467080 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
RBM17-208ENST00000467080 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
RBM17-208ENST00000467080 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
RBM17-208ENST00000467080 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
RBM17-208ENST00000467080 IFNLR1Q8IU57 520 aaPredicted RBP15.62■□□□□ 0.09
RBM17-208ENST00000467080 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
RBM17-208ENST00000467080 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
RBM17-208ENST00000467080 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
RBM17-208ENST00000467080 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
RBM17-208ENST00000467080 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
RBM17-208ENST00000467080 SPOCK2Q92563 424 aa15.42■□□□□ 0.06
RBM17-208ENST00000467080 POTEHQ6S545 545 aa15.41■□□□□ 0.06
RBM17-208ENST00000467080 NUBP1P53384 320 aa15.35■□□□□ 0.05
RBM17-208ENST00000467080 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
RBM17-208ENST00000467080 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
RBM17-208ENST00000467080 HAX1O00165 279 aa15.22■□□□□ 0.03
RBM17-208ENST00000467080 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
RBM17-208ENST00000467080 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
RBM17-208ENST00000467080 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
RBM17-208ENST00000467080 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
RBM17-208ENST00000467080 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
RBM17-208ENST00000467080 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
RBM17-208ENST00000467080 GSE1Q14687 1217 aa15.17■□□□□ 0.02
RBM17-208ENST00000467080 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms