RNA–Protein interactions for RNA: ENST00000467047.1

PCK1-202, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

TSL 1 (best)

Gene PCK1, Length 5,074 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-202ENST00000467047 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
PCK1-202ENST00000467047 MYT1Q01538 1121 aa17.47■□□□□ 0.39
PCK1-202ENST00000467047 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
PCK1-202ENST00000467047 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
PCK1-202ENST00000467047 APLP2Q06481 763 aa16.7■□□□□ 0.26
PCK1-202ENST00000467047 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
PCK1-202ENST00000467047 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
PCK1-202ENST00000467047 SHROOM4Q9ULL8 1493 aa16.62■□□□□ 0.25
PCK1-202ENST00000467047 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
PCK1-202ENST00000467047 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
PCK1-202ENST00000467047 TTBK1Q5TCY1 1321 aaPredicted RBP16.25■□□□□ 0.19
PCK1-202ENST00000467047 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
PCK1-202ENST00000467047 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
PCK1-202ENST00000467047 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
PCK1-202ENST00000467047 PCGF6Q9BYE7 350 aa16.04■□□□□ 0.16
PCK1-202ENST00000467047 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
PCK1-202ENST00000467047 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
PCK1-202ENST00000467047 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
PCK1-202ENST00000467047 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
PCK1-202ENST00000467047 NEFLP07196 543 aa15.81■□□□□ 0.12
PCK1-202ENST00000467047 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
PCK1-202ENST00000467047 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.09
PCK1-202ENST00000467047 HRCP23327 699 aa15.57■□□□□ 0.08
PCK1-202ENST00000467047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
PCK1-202ENST00000467047 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
PCK1-202ENST00000467047 DAXXQ9UER7 740 aaPredicted RBP15.47■□□□□ 0.07
PCK1-202ENST00000467047 POLR3GLQ9BT43 218 aa15.4■□□□□ 0.06
PCK1-202ENST00000467047 ITGAEP38570 1179 aa15.34■□□□□ 0.05
PCK1-202ENST00000467047 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.05
PCK1-202ENST00000467047 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
PCK1-202ENST00000467047 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
PCK1-202ENST00000467047 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
PCK1-202ENST00000467047 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
PCK1-202ENST00000467047 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
PCK1-202ENST00000467047 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
PCK1-202ENST00000467047 GLIPR1L2Q4G1C9 344 aa15.06■□□□□ 0
PCK1-202ENST00000467047 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
PCK1-202ENST00000467047 TRIM52Q96A61 297 aa14.95□□□□□ -0.02
PCK1-202ENST00000467047 FAM50AQ14320 339 aaKnown RBP14.94□□□□□ -0.02
PCK1-202ENST00000467047 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
PCK1-202ENST00000467047 DIEXFQ68CQ4 756 aaKnown RBP14.92□□□□□ -0.02
PCK1-202ENST00000467047 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
PCK1-202ENST00000467047 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
PCK1-202ENST00000467047 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
PCK1-202ENST00000467047 NEFMP07197 916 aa14.78□□□□□ -0.04
PCK1-202ENST00000467047 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
PCK1-202ENST00000467047 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.04
PCK1-202ENST00000467047 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
PCK1-202ENST00000467047 FBLN2P98095 1184 aa14.75□□□□□ -0.05
PCK1-202ENST00000467047 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
PCK1-202ENST00000467047 ANP32CO43423 234 aa14.73□□□□□ -0.05
PCK1-202ENST00000467047 BCANQ96GW7 911 aa14.72□□□□□ -0.05
PCK1-202ENST00000467047 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
PCK1-202ENST00000467047 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCK1-202ENST00000467047 EIF5BO60841 1220 aaKnown RBP14.66□□□□□ -0.06
PCK1-202ENST00000467047 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
PCK1-202ENST00000467047 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
PCK1-202ENST00000467047 ANP32AP39687 249 aaKnown RBP14.56□□□□□ -0.08
PCK1-202ENST00000467047 ABCC9O60706 1549 aa14.53□□□□□ -0.08
PCK1-202ENST00000467047 ZNF777Q9ULD5 760 aaPredicted RBP14.49□□□□□ -0.09
PCK1-202ENST00000467047 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
PCK1-202ENST00000467047 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
PCK1-202ENST00000467047 P3H3Q8IVL6 736 aa14.46□□□□□ -0.1
PCK1-202ENST00000467047 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
PCK1-202ENST00000467047 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
PCK1-202ENST00000467047 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
PCK1-202ENST00000467047 ANP32BQ92688 251 aaKnown RBP14.39□□□□□ -0.11
PCK1-202ENST00000467047 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
PCK1-202ENST00000467047 ANP32EQ9BTT0 268 aa14.35□□□□□ -0.11
PCK1-202ENST00000467047 UPF2Q9HAU5 1272 aaKnown RBP14.34□□□□□ -0.11
PCK1-202ENST00000467047 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
PCK1-202ENST00000467047 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
PCK1-202ENST00000467047 NPM2Q86SE8 214 aaKnown RBP14.3□□□□□ -0.12
PCK1-202ENST00000467047 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
PCK1-202ENST00000467047 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
PCK1-202ENST00000467047 FKBP8Q14318 412 aa14.2□□□□□ -0.14
PCK1-202ENST00000467047 TSPY4P0CV99 314 aa14.19□□□□□ -0.14
PCK1-202ENST00000467047 TSPY10P0CW01 314 aa14.19□□□□□ -0.14
PCK1-202ENST00000467047 TNNT2P45379 298 aaPredicted RBP14.19□□□□□ -0.14
PCK1-202ENST00000467047 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCK1-202ENST00000467047 TMC1Q8TDI8 760 aa14.18□□□□□ -0.14
PCK1-202ENST00000467047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.145e-10■■□□□ 11.9
PCK1-202ENST00000467047 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
PCK1-202ENST00000467047 WDR43Q15061 677 aaKnown RBP eCLIP14.16□□□□□ -0.14
PCK1-202ENST00000467047 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
PCK1-202ENST00000467047 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
PCK1-202ENST00000467047 CDK11BP21127 795 aaKnown RBP14.12□□□□□ -0.15
PCK1-202ENST00000467047 A0A0G2JS52 829 aa14.11□□□□□ -0.15
PCK1-202ENST00000467047 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
PCK1-202ENST00000467047 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
PCK1-202ENST00000467047 ERICH6BQ5W0A0 696 aa14.1□□□□□ -0.15
PCK1-202ENST00000467047 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
PCK1-202ENST00000467047 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
PCK1-202ENST00000467047 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.15
PCK1-202ENST00000467047 NBR1Q14596 966 aa14.08□□□□□ -0.16
PCK1-202ENST00000467047 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
PCK1-202ENST00000467047 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
PCK1-202ENST00000467047 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
PCK1-202ENST00000467047 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
PCK1-202ENST00000467047 DDRGK1Q96HY6 314 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms