RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
EDEM3-205ENST00000466606 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
EDEM3-205ENST00000466606 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
EDEM3-205ENST00000466606 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
EDEM3-205ENST00000466606 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
EDEM3-205ENST00000466606 FOXD1Q16676 465 aa17.39■□□□□ 0.37
EDEM3-205ENST00000466606 ADRA2BP18089 450 aa16.83■□□□□ 0.28
EDEM3-205ENST00000466606 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
EDEM3-205ENST00000466606 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
EDEM3-205ENST00000466606 MSH5O43196 834 aa15.92■□□□□ 0.14
EDEM3-205ENST00000466606 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
EDEM3-205ENST00000466606 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
EDEM3-205ENST00000466606 KCNA4P22459 653 aa15.29■□□□□ 0.04
EDEM3-205ENST00000466606 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
EDEM3-205ENST00000466606 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
EDEM3-205ENST00000466606 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
EDEM3-205ENST00000466606 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
EDEM3-205ENST00000466606 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
EDEM3-205ENST00000466606 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
EDEM3-205ENST00000466606 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
EDEM3-205ENST00000466606 HOXD11P31277 338 aaPredicted RBP14.63□□□□□ -0.07
EDEM3-205ENST00000466606 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
EDEM3-205ENST00000466606 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
EDEM3-205ENST00000466606 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
EDEM3-205ENST00000466606 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
EDEM3-205ENST00000466606 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
EDEM3-205ENST00000466606 ZBTB22O15209 634 aa14.08□□□□□ -0.16
EDEM3-205ENST00000466606 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
EDEM3-205ENST00000466606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.17
EDEM3-205ENST00000466606 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
EDEM3-205ENST00000466606 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
EDEM3-205ENST00000466606 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
EDEM3-205ENST00000466606 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
EDEM3-205ENST00000466606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
EDEM3-205ENST00000466606 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
EDEM3-205ENST00000466606 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
EDEM3-205ENST00000466606 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
EDEM3-205ENST00000466606 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
EDEM3-205ENST00000466606 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
EDEM3-205ENST00000466606 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
EDEM3-205ENST00000466606 APLP2Q06481 763 aa13.37□□□□□ -0.27
EDEM3-205ENST00000466606 CAPN15O75808 1086 aa13.36□□□□□ -0.27
EDEM3-205ENST00000466606 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
EDEM3-205ENST00000466606 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
EDEM3-205ENST00000466606 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
EDEM3-205ENST00000466606 ABCB7O75027 752 aa13.15□□□□□ -0.3
EDEM3-205ENST00000466606 POLA2Q14181 598 aa13.09□□□□□ -0.31
EDEM3-205ENST00000466606 DSG3P32926 999 aa13.07□□□□□ -0.32
EDEM3-205ENST00000466606 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
EDEM3-205ENST00000466606 FBLN2P98095 1184 aa12.82□□□□□ -0.36
EDEM3-205ENST00000466606 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
EDEM3-205ENST00000466606 FKBP8Q14318 412 aa12.71□□□□□ -0.37
EDEM3-205ENST00000466606 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
EDEM3-205ENST00000466606 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
EDEM3-205ENST00000466606 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
EDEM3-205ENST00000466606 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
EDEM3-205ENST00000466606 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
EDEM3-205ENST00000466606 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
EDEM3-205ENST00000466606 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
EDEM3-205ENST00000466606 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
EDEM3-205ENST00000466606 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
EDEM3-205ENST00000466606 PROM2Q8N271 834 aa12.32□□□□□ -0.44
EDEM3-205ENST00000466606 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
EDEM3-205ENST00000466606 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
EDEM3-205ENST00000466606 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
EDEM3-205ENST00000466606 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
EDEM3-205ENST00000466606 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
EDEM3-205ENST00000466606 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
EDEM3-205ENST00000466606 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
EDEM3-205ENST00000466606 POTEHQ6S545 545 aa12.05□□□□□ -0.48
EDEM3-205ENST00000466606 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
EDEM3-205ENST00000466606 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
EDEM3-205ENST00000466606 MIER1Q8N108 512 aa11.95□□□□□ -0.5
EDEM3-205ENST00000466606 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
EDEM3-205ENST00000466606 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
EDEM3-205ENST00000466606 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
EDEM3-205ENST00000466606 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
EDEM3-205ENST00000466606 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
EDEM3-205ENST00000466606 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
EDEM3-205ENST00000466606 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
EDEM3-205ENST00000466606 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
EDEM3-205ENST00000466606 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
EDEM3-205ENST00000466606 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
EDEM3-205ENST00000466606 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
EDEM3-205ENST00000466606 SPOCK2Q92563 424 aa11.71□□□□□ -0.53
EDEM3-205ENST00000466606 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
EDEM3-205ENST00000466606 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
EDEM3-205ENST00000466606 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
EDEM3-205ENST00000466606 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
EDEM3-205ENST00000466606 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
EDEM3-205ENST00000466606 NUBP1P53384 320 aa11.61□□□□□ -0.55
EDEM3-205ENST00000466606 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
EDEM3-205ENST00000466606 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
EDEM3-205ENST00000466606 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
EDEM3-205ENST00000466606 PKD2Q13563 968 aa11.52□□□□□ -0.57
EDEM3-205ENST00000466606 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
EDEM3-205ENST00000466606 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
EDEM3-205ENST00000466606 GSE1Q14687 1217 aa11.46□□□□□ -0.57
EDEM3-205ENST00000466606 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
EDEM3-205ENST00000466606 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms