RNA–Protein interactions for RNA: ENST00000466479.1

CCT6A-204, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 2

Gene CCT6A, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-204ENST00000466479 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
CCT6A-204ENST00000466479 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
CCT6A-204ENST00000466479 SENP3Q9H4L4 574 aaPredicted RBP27.96■■■□□ 2.07
CCT6A-204ENST00000466479 PHF23Q9BUL5 403 aaPredicted RBP27.89■■■□□ 2.06
CCT6A-204ENST00000466479 FOXD1Q16676 465 aa26.06■■□□□ 1.76
CCT6A-204ENST00000466479 PLPPR3Q6T4P5 718 aa25.74■■□□□ 1.71
CCT6A-204ENST00000466479 PPP6R1Q9UPN7 881 aa24.65■■□□□ 1.54
CCT6A-204ENST00000466479 ADRA2BP18089 450 aa24.62■■□□□ 1.53
CCT6A-204ENST00000466479 PIAS4Q8N2W9 510 aaPredicted RBP24.41■■□□□ 1.5
CCT6A-204ENST00000466479 MSH5O43196 834 aa24.32■■□□□ 1.48
CCT6A-204ENST00000466479 POTEDQ86YR6 584 aa23.54■■□□□ 1.36
CCT6A-204ENST00000466479 PPP4R3CPQ6ZMV5 832 aa22.65■■□□□ 1.22
CCT6A-204ENST00000466479 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
CCT6A-204ENST00000466479 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
CCT6A-204ENST00000466479 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
CCT6A-204ENST00000466479 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
CCT6A-204ENST00000466479 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
CCT6A-204ENST00000466479 KCNA4P22459 653 aa22■■□□□ 1.11
CCT6A-204ENST00000466479 NPM3O75607 178 aaKnown RBP21.71■■□□□ 1.07
CCT6A-204ENST00000466479 RNF216Q9NWF9 866 aaPredicted RBP21.65■■□□□ 1.06
CCT6A-204ENST00000466479 HOXD11P31277 338 aaPredicted RBP21.59■■□□□ 1.05
CCT6A-204ENST00000466479 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
CCT6A-204ENST00000466479 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
CCT6A-204ENST00000466479 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
CCT6A-204ENST00000466479 CACNB1Q02641 598 aaPredicted RBP20.82■□□□□ 0.92
CCT6A-204ENST00000466479 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
CCT6A-204ENST00000466479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.888e-6■■■□□ 19
CCT6A-204ENST00000466479 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
CCT6A-204ENST00000466479 C1QBPQ07021 282 aaKnown RBP20.45■□□□□ 0.86
CCT6A-204ENST00000466479 FOXD4L1Q9NU39 408 aa20.29■□□□□ 0.84
CCT6A-204ENST00000466479 ZBTB22O15209 634 aa20.24■□□□□ 0.83
CCT6A-204ENST00000466479 U3KPZ7 1027 aaPredicted RBP20.23■□□□□ 0.83
CCT6A-204ENST00000466479 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
CCT6A-204ENST00000466479 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
CCT6A-204ENST00000466479 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
CCT6A-204ENST00000466479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
CCT6A-204ENST00000466479 HNRNPUL2Q1KMD3 747 aaKnown RBP19.95■□□□□ 0.78
CCT6A-204ENST00000466479 SAMD1Q6SPF0 538 aaPredicted RBP19.87■□□□□ 0.77
CCT6A-204ENST00000466479 APLP2Q06481 763 aa19.77■□□□□ 0.76
CCT6A-204ENST00000466479 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
CCT6A-204ENST00000466479 CAPN15O75808 1086 aa19.67■□□□□ 0.74
CCT6A-204ENST00000466479 ATXN8OSP0DMR3 200 aa19.6■□□□□ 0.73
CCT6A-204ENST00000466479 ATF5Q9Y2D1 282 aaPredicted RBP19.53■□□□□ 0.72
CCT6A-204ENST00000466479 ZNF219Q9P2Y4 722 aaPredicted RBP19.51■□□□□ 0.71
CCT6A-204ENST00000466479 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
CCT6A-204ENST00000466479 DSG3P32926 999 aa19.5■□□□□ 0.71
CCT6A-204ENST00000466479 ABCB7O75027 752 aa19.26■□□□□ 0.67
CCT6A-204ENST00000466479 POLA2Q14181 598 aa19.16■□□□□ 0.66
CCT6A-204ENST00000466479 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
CCT6A-204ENST00000466479 FBLN2P98095 1184 aa18.73■□□□□ 0.59
CCT6A-204ENST00000466479 MKRN4PQ13434 485 aaPredicted RBP18.68■□□□□ 0.58
CCT6A-204ENST00000466479 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
CCT6A-204ENST00000466479 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
CCT6A-204ENST00000466479 POTEHQ6S545 545 aa18.47■□□□□ 0.55
CCT6A-204ENST00000466479 SPDYE2BA6NHP3 402 aa18.34■□□□□ 0.53
CCT6A-204ENST00000466479 SPDYE6P0CI01 402 aa18.34■□□□□ 0.53
CCT6A-204ENST00000466479 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
CCT6A-204ENST00000466479 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
CCT6A-204ENST00000466479 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
CCT6A-204ENST00000466479 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
CCT6A-204ENST00000466479 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
CCT6A-204ENST00000466479 SSUH2Q9Y2M2 353 aa18.17■□□□□ 0.5
CCT6A-204ENST00000466479 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
CCT6A-204ENST00000466479 FKBP8Q14318 412 aa18.12■□□□□ 0.49
CCT6A-204ENST00000466479 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
CCT6A-204ENST00000466479 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
CCT6A-204ENST00000466479 PROM2Q8N271 834 aa17.91■□□□□ 0.46
CCT6A-204ENST00000466479 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
CCT6A-204ENST00000466479 SPDYE1Q8NFV5 336 aaPredicted RBP17.82■□□□□ 0.44
CCT6A-204ENST00000466479 PIP4P2Q8N4L2 257 aa17.76■□□□□ 0.43
CCT6A-204ENST00000466479 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
CCT6A-204ENST00000466479 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
CCT6A-204ENST00000466479 FXR2P51116 673 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCT6A-204ENST00000466479 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
CCT6A-204ENST00000466479 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
CCT6A-204ENST00000466479 HAX1O00165 279 aa17.4■□□□□ 0.38
CCT6A-204ENST00000466479 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
CCT6A-204ENST00000466479 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
CCT6A-204ENST00000466479 CHADLQ6NUI6 762 aa17.31■□□□□ 0.36
CCT6A-204ENST00000466479 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
CCT6A-204ENST00000466479 MIER1Q8N108 512 aa17.29■□□□□ 0.36
CCT6A-204ENST00000466479 VASPP50552 380 aaPredicted RBP17.28■□□□□ 0.36
CCT6A-204ENST00000466479 PLCD3Q8N3E9 789 aa17.25■□□□□ 0.35
CCT6A-204ENST00000466479 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
CCT6A-204ENST00000466479 EVX2Q03828 476 aa17.19■□□□□ 0.34
CCT6A-204ENST00000466479 FARP1Q9Y4F1 1045 aaPredicted RBP17.14■□□□□ 0.33
CCT6A-204ENST00000466479 MNX1P50219 401 aaPredicted RBP17.13■□□□□ 0.33
CCT6A-204ENST00000466479 C19orf67A6NJJ6 358 aa17.08■□□□□ 0.32
CCT6A-204ENST00000466479 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
CCT6A-204ENST00000466479 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCT6A-204ENST00000466479 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
CCT6A-204ENST00000466479 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
CCT6A-204ENST00000466479 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
CCT6A-204ENST00000466479 SPOCK2Q92563 424 aa16.86■□□□□ 0.29
CCT6A-204ENST00000466479 NUBP1P53384 320 aa16.85■□□□□ 0.29
CCT6A-204ENST00000466479 GABBR2O75899 941 aa16.8■□□□□ 0.28
CCT6A-204ENST00000466479 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
CCT6A-204ENST00000466479 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
CCT6A-204ENST00000466479 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
CCT6A-204ENST00000466479 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms