RNA–Protein interactions for RNA: ENST00000466451.1

SEC61A2-211, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 427 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-211ENST00000466451 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
SEC61A2-211ENST00000466451 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
SEC61A2-211ENST00000466451 SENP3Q9H4L4 574 aaPredicted RBP23.4■■□□□ 1.34
SEC61A2-211ENST00000466451 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
SEC61A2-211ENST00000466451 FOXD1Q16676 465 aa21.86■■□□□ 1.09
SEC61A2-211ENST00000466451 POTEDQ86YR6 584 aa20.96■□□□□ 0.95
SEC61A2-211ENST00000466451 MSH5O43196 834 aa20.65■□□□□ 0.9
SEC61A2-211ENST00000466451 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
SEC61A2-211ENST00000466451 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
SEC61A2-211ENST00000466451 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
SEC61A2-211ENST00000466451 ADRA2BP18089 450 aa19.99■□□□□ 0.79
SEC61A2-211ENST00000466451 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
SEC61A2-211ENST00000466451 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
SEC61A2-211ENST00000466451 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
SEC61A2-211ENST00000466451 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
SEC61A2-211ENST00000466451 DCAF8L1A6NGE4 600 aa17.8■□□□□ 0.44
SEC61A2-211ENST00000466451 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
SEC61A2-211ENST00000466451 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
SEC61A2-211ENST00000466451 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
SEC61A2-211ENST00000466451 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
SEC61A2-211ENST00000466451 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
SEC61A2-211ENST00000466451 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
SEC61A2-211ENST00000466451 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
SEC61A2-211ENST00000466451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
SEC61A2-211ENST00000466451 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
SEC61A2-211ENST00000466451 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
SEC61A2-211ENST00000466451 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
SEC61A2-211ENST00000466451 POTEHQ6S545 545 aa16.34■□□□□ 0.21
SEC61A2-211ENST00000466451 CAPN15O75808 1086 aa16.31■□□□□ 0.2
SEC61A2-211ENST00000466451 DSG3P32926 999 aa16.3■□□□□ 0.2
SEC61A2-211ENST00000466451 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
SEC61A2-211ENST00000466451 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
SEC61A2-211ENST00000466451 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
SEC61A2-211ENST00000466451 ABCB7O75027 752 aa15.9■□□□□ 0.14
SEC61A2-211ENST00000466451 APLP2Q06481 763 aa15.88■□□□□ 0.13
SEC61A2-211ENST00000466451 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
SEC61A2-211ENST00000466451 KCNA4P22459 653 aa15.83■□□□□ 0.12
SEC61A2-211ENST00000466451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
SEC61A2-211ENST00000466451 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
SEC61A2-211ENST00000466451 SAMD1Q6SPF0 538 aaPredicted RBP15.64■□□□□ 0.09
SEC61A2-211ENST00000466451 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
SEC61A2-211ENST00000466451 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
SEC61A2-211ENST00000466451 POLA2Q14181 598 aa15.38■□□□□ 0.05
SEC61A2-211ENST00000466451 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
SEC61A2-211ENST00000466451 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
SEC61A2-211ENST00000466451 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
SEC61A2-211ENST00000466451 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
SEC61A2-211ENST00000466451 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
SEC61A2-211ENST00000466451 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
SEC61A2-211ENST00000466451 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
SEC61A2-211ENST00000466451 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
SEC61A2-211ENST00000466451 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
SEC61A2-211ENST00000466451 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
SEC61A2-211ENST00000466451 PITPNM1O00562 1244 aa14.83□□□□□ -0.04
SEC61A2-211ENST00000466451 HAX1O00165 279 aa14.82□□□□□ -0.04
SEC61A2-211ENST00000466451 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
SEC61A2-211ENST00000466451 EVX2Q03828 476 aa14.58□□□□□ -0.08
SEC61A2-211ENST00000466451 ZBTB22O15209 634 aa14.54□□□□□ -0.08
SEC61A2-211ENST00000466451 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
SEC61A2-211ENST00000466451 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
SEC61A2-211ENST00000466451 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
SEC61A2-211ENST00000466451 FBLN2P98095 1184 aa14.48□□□□□ -0.09
SEC61A2-211ENST00000466451 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
SEC61A2-211ENST00000466451 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
SEC61A2-211ENST00000466451 CLEC11AQ9Y240 323 aa14.42□□□□□ -0.1
SEC61A2-211ENST00000466451 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
SEC61A2-211ENST00000466451 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
SEC61A2-211ENST00000466451 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
SEC61A2-211ENST00000466451 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
SEC61A2-211ENST00000466451 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
SEC61A2-211ENST00000466451 GABBR2O75899 941 aa14.22□□□□□ -0.13
SEC61A2-211ENST00000466451 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
SEC61A2-211ENST00000466451 LHX8Q68G74 356 aa14.15□□□□□ -0.14
SEC61A2-211ENST00000466451 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
SEC61A2-211ENST00000466451 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
SEC61A2-211ENST00000466451 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
SEC61A2-211ENST00000466451 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
SEC61A2-211ENST00000466451 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
SEC61A2-211ENST00000466451 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
SEC61A2-211ENST00000466451 CLCN6P51797 869 aa13.82□□□□□ -0.2
SEC61A2-211ENST00000466451 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
SEC61A2-211ENST00000466451 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
SEC61A2-211ENST00000466451 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
SEC61A2-211ENST00000466451 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
SEC61A2-211ENST00000466451 GALR2O43603 387 aaPredicted RBP13.59□□□□□ -0.23
SEC61A2-211ENST00000466451 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
SEC61A2-211ENST00000466451 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
SEC61A2-211ENST00000466451 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
SEC61A2-211ENST00000466451 PHF12Q96QT6 1004 aa13.47□□□□□ -0.25
SEC61A2-211ENST00000466451 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
SEC61A2-211ENST00000466451 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
SEC61A2-211ENST00000466451 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
SEC61A2-211ENST00000466451 POTEMA6NI47 508 aa13.37□□□□□ -0.27
SEC61A2-211ENST00000466451 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
SEC61A2-211ENST00000466451 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
SEC61A2-211ENST00000466451 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
SEC61A2-211ENST00000466451 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
SEC61A2-211ENST00000466451 METRNQ9UJH8 293 aa13.28□□□□□ -0.28
SEC61A2-211ENST00000466451 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
SEC61A2-211ENST00000466451 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms