RNA–Protein interactions for RNA: ENST00000466020.1

CLHC1-211, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 153 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-211ENST00000466020 AEBP2Q6ZN18 517 aaPredicted RBP10.17□□□□□ -0.78
CLHC1-211ENST00000466020 CHIC1Q5VXU3 224 aa9.8□□□□□ -0.84
CLHC1-211ENST00000466020 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
CLHC1-211ENST00000466020 PHF23Q9BUL5 403 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-211ENST00000466020 FOXD1Q16676 465 aa8.13□□□□□ -1.11
CLHC1-211ENST00000466020 PLPPR3Q6T4P5 718 aa7.91□□□□□ -1.14
CLHC1-211ENST00000466020 MSH5O43196 834 aa7.76□□□□□ -1.17
CLHC1-211ENST00000466020 PIAS4Q8N2W9 510 aaPredicted RBP7.68□□□□□ -1.18
CLHC1-211ENST00000466020 ADRA2BP18089 450 aa7.57□□□□□ -1.2
CLHC1-211ENST00000466020 PPP6R1Q9UPN7 881 aa7.55□□□□□ -1.2
CLHC1-211ENST00000466020 POTEDQ86YR6 584 aa7.4□□□□□ -1.22
CLHC1-211ENST00000466020 SCAF1Q9H7N4 1312 aaKnown RBP7.15□□□□□ -1.26
CLHC1-211ENST00000466020 DMRT2Q9Y5R5 561 aa6.99□□□□□ -1.29
CLHC1-211ENST00000466020 MAPK8IP2Q13387 824 aaPredicted RBP6.9□□□□□ -1.3
CLHC1-211ENST00000466020 PPP4R3CPQ6ZMV5 832 aa6.87□□□□□ -1.31
CLHC1-211ENST00000466020 CNKSR2Q8WXI2 1034 aa6.8□□□□□ -1.32
CLHC1-211ENST00000466020 NCBP3Q53F19 620 aaKnown RBP6.75□□□□□ -1.33
CLHC1-211ENST00000466020 HOXD11P31277 338 aaPredicted RBP6.73□□□□□ -1.33
CLHC1-211ENST00000466020 RNF216Q9NWF9 866 aaPredicted RBP6.73□□□□□ -1.33
CLHC1-211ENST00000466020 DCAF8L1A6NGE4 600 aa6.71□□□□□ -1.34
CLHC1-211ENST00000466020 DNAJC5BQ9UF47 199 aa6.61□□□□□ -1.35
CLHC1-211ENST00000466020 CACNB1Q02641 598 aaPredicted RBP6.59□□□□□ -1.35
CLHC1-211ENST00000466020 RNF39Q9H2S5 420 aa6.54□□□□□ -1.36
CLHC1-211ENST00000466020 C1QBPQ07021 282 aaKnown RBP6.52□□□□□ -1.37
CLHC1-211ENST00000466020 NPM3O75607 178 aaKnown RBP6.49□□□□□ -1.37
CLHC1-211ENST00000466020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLHC1-211ENST00000466020 KCNA4P22459 653 aa6.35□□□□□ -1.39
CLHC1-211ENST00000466020 APLP2Q06481 763 aa6.32□□□□□ -1.4
CLHC1-211ENST00000466020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.41
CLHC1-211ENST00000466020 HNRNPUL2Q1KMD3 747 aaKnown RBP6.27□□□□□ -1.41
CLHC1-211ENST00000466020 U3KPZ7 1027 aaPredicted RBP6.24□□□□□ -1.41
CLHC1-211ENST00000466020 CAPN15O75808 1086 aa6.2□□□□□ -1.42
CLHC1-211ENST00000466020 SAMD1Q6SPF0 538 aaPredicted RBP6.19□□□□□ -1.42
CLHC1-211ENST00000466020 ZNF219Q9P2Y4 722 aaPredicted RBP6.17□□□□□ -1.42
CLHC1-211ENST00000466020 SLC4A2P04920 1241 aa6.15□□□□□ -1.42
CLHC1-211ENST00000466020 DSG3P32926 999 aa6.11□□□□□ -1.43
CLHC1-211ENST00000466020 SPINK5Q9NQ38 1064 aaPredicted RBP6.11□□□□□ -1.43
CLHC1-211ENST00000466020 MYCNP04198 464 aaPredicted RBP6.1□□□□□ -1.43
CLHC1-211ENST00000466020 SLC4A1APQ9BWU0 796 aaKnown RBP6.08□□□□□ -1.44
CLHC1-211ENST00000466020 TRHP20396 242 aaPredicted RBP6.07□□□□□ -1.44
CLHC1-211ENST00000466020 FOXD4L1Q9NU39 408 aa6.02□□□□□ -1.45
CLHC1-211ENST00000466020 ABCB7O75027 752 aa5.98□□□□□ -1.45
CLHC1-211ENST00000466020 RBM42Q9BTD8 480 aaKnown RBP5.98□□□□□ -1.45
CLHC1-211ENST00000466020 ZBTB12Q9Y330 459 aaPredicted RBP5.96□□□□□ -1.46
CLHC1-211ENST00000466020 POLA2Q14181 598 aa5.91□□□□□ -1.46
CLHC1-211ENST00000466020 ATXN8OSP0DMR3 200 aa5.9□□□□□ -1.46
CLHC1-211ENST00000466020 POTEHQ6S545 545 aa5.84□□□□□ -1.47
CLHC1-211ENST00000466020 AKT1S1Q96B36 256 aa5.79□□□□□ -1.48
CLHC1-211ENST00000466020 ZBTB22O15209 634 aa5.78□□□□□ -1.48
CLHC1-211ENST00000466020 FBLN2P98095 1184 aa5.78□□□□□ -1.48
CLHC1-211ENST00000466020 ATF5Q9Y2D1 282 aaPredicted RBP5.77□□□□□ -1.49
CLHC1-211ENST00000466020 CHRDL2Q6WN34 429 aa5.74□□□□□ -1.49
CLHC1-211ENST00000466020 OSCARQ8IYS5 282 aa5.71□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE2BA6NHP3 402 aa5.7□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE6P0CI01 402 aa5.7□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE2Q495Y8 402 aa5.7□□□□□ -1.5
CLHC1-211ENST00000466020 REM2Q8IYK8 340 aaPredicted RBP5.67□□□□□ -1.5
CLHC1-211ENST00000466020 SPDYE1Q8NFV5 336 aaPredicted RBP5.61□□□□□ -1.51
CLHC1-211ENST00000466020 PITPNM1O00562 1244 aa5.59□□□□□ -1.51
CLHC1-211ENST00000466020 ZNF692Q9BU19 519 aaPredicted RBP5.59□□□□□ -1.51
CLHC1-211ENST00000466020 PIP4P2Q8N4L2 257 aa5.57□□□□□ -1.52
CLHC1-211ENST00000466020 CSRNP3Q8WYN3 585 aa5.57□□□□□ -1.52
CLHC1-211ENST00000466020 FXR2P51116 673 aaKnown RBP eCLIP5.56□□□□□ -1.52
CLHC1-211ENST00000466020 SSUH2Q9Y2M2 353 aa5.56□□□□□ -1.52
CLHC1-211ENST00000466020 MKRN4PQ13434 485 aaPredicted RBP5.54□□□□□ -1.52
CLHC1-211ENST00000466020 EHMT2Q96KQ7 1210 aa5.54□□□□□ -1.52
CLHC1-211ENST00000466020 CLEC11AQ9Y240 323 aa5.52□□□□□ -1.53
CLHC1-211ENST00000466020 SP7Q8TDD2 431 aaPredicted RBP5.51□□□□□ -1.53
CLHC1-211ENST00000466020 HAX1O00165 279 aa5.5□□□□□ -1.53
CLHC1-211ENST00000466020 PABPN1Q86U42 306 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLHC1-211ENST00000466020 PRR29P0C7W0 189 aa5.47□□□□□ -1.53
CLHC1-211ENST00000466020 PRKAR2AP13861 404 aaKnown RBP5.47□□□□□ -1.53
CLHC1-211ENST00000466020 STAG3Q9UJ98 1225 aa5.47□□□□□ -1.53
CLHC1-211ENST00000466020 CLCN6P51797 869 aa5.4□□□□□ -1.54
CLHC1-211ENST00000466020 SPDYE4A6NLX3 237 aa5.39□□□□□ -1.55
CLHC1-211ENST00000466020 C19orf67A6NJJ6 358 aa5.38□□□□□ -1.55
CLHC1-211ENST00000466020 CHADLQ6NUI6 762 aa5.34□□□□□ -1.55
CLHC1-211ENST00000466020 FARP1Q9Y4F1 1045 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-211ENST00000466020 PAK3O75914 559 aaPredicted RBP5.32□□□□□ -1.56
CLHC1-211ENST00000466020 NPM1P06748 294 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLHC1-211ENST00000466020 CD44P16070 742 aaKnown RBP5.31□□□□□ -1.56
CLHC1-211ENST00000466020 PLEKHG5O94827 1062 aa5.3□□□□□ -1.56
CLHC1-211ENST00000466020 EVX2Q03828 476 aa5.28□□□□□ -1.56
CLHC1-211ENST00000466020 GABBR2O75899 941 aa5.27□□□□□ -1.57
CLHC1-211ENST00000466020 CREBZFQ9NS37 354 aa5.26□□□□□ -1.57
CLHC1-211ENST00000466020 ZNF579Q8NAF0 562 aaKnown RBP5.25□□□□□ -1.57
CLHC1-211ENST00000466020 PROM2Q8N271 834 aa5.24□□□□□ -1.57
CLHC1-211ENST00000466020 ZRANB1Q9UGI0 708 aa5.24□□□□□ -1.57
CLHC1-211ENST00000466020 DCBLD2Q96PD2 775 aa5.22□□□□□ -1.57
CLHC1-211ENST00000466020 ZBTB47Q9UFB7 747 aaPredicted RBP5.22□□□□□ -1.57
CLHC1-211ENST00000466020 LHX8Q68G74 356 aa5.16□□□□□ -1.58
CLHC1-211ENST00000466020 MIER1Q8N108 512 aa5.16□□□□□ -1.58
CLHC1-211ENST00000466020 MNX1P50219 401 aaPredicted RBP5.15□□□□□ -1.59
CLHC1-211ENST00000466020 PLCD3Q8N3E9 789 aa5.15□□□□□ -1.59
CLHC1-211ENST00000466020 FBXO3Q9UK99 471 aa5.15□□□□□ -1.59
CLHC1-211ENST00000466020 FKBP8Q14318 412 aa5.11□□□□□ -1.59
CLHC1-211ENST00000466020 GALR2O43603 387 aaPredicted RBP5.1□□□□□ -1.59
CLHC1-211ENST00000466020 PHF12Q96QT6 1004 aa5.1□□□□□ -1.59
CLHC1-211ENST00000466020 TSPYL2Q9H2G4 693 aaPredicted RBP5.09□□□□□ -1.59
CLHC1-211ENST00000466020 POTEIP0CG38 1075 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms