RNA–Protein interactions for RNA: ENST00000465670.1

EIF3B-207, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 2,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-207ENST00000465670 NISCHQ9Y2I1 1504 aa28.91■■■□□ 2.22
EIF3B-207ENST00000465670 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.63
EIF3B-207ENST00000465670 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
EIF3B-207ENST00000465670 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
EIF3B-207ENST00000465670 HRCP23327 699 aa24.5■■□□□ 1.51
EIF3B-207ENST00000465670 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
EIF3B-207ENST00000465670 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
EIF3B-207ENST00000465670 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
EIF3B-207ENST00000465670 PCGF6Q9BYE7 350 aa24.14■■□□□ 1.45
EIF3B-207ENST00000465670 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
EIF3B-207ENST00000465670 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
EIF3B-207ENST00000465670 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
EIF3B-207ENST00000465670 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
EIF3B-207ENST00000465670 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
EIF3B-207ENST00000465670 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
EIF3B-207ENST00000465670 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
EIF3B-207ENST00000465670 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
EIF3B-207ENST00000465670 ABCC9O60706 1549 aa23.08■■□□□ 1.29
EIF3B-207ENST00000465670 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
EIF3B-207ENST00000465670 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
EIF3B-207ENST00000465670 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
EIF3B-207ENST00000465670 ZEB1P37275 1124 aaPredicted RBP22.94■■□□□ 1.26
EIF3B-207ENST00000465670 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
EIF3B-207ENST00000465670 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
EIF3B-207ENST00000465670 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
EIF3B-207ENST00000465670 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
EIF3B-207ENST00000465670 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
EIF3B-207ENST00000465670 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
EIF3B-207ENST00000465670 NACADO15069 1562 aa22.58■■□□□ 1.2
EIF3B-207ENST00000465670 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
EIF3B-207ENST00000465670 WIZO95785 1651 aa22.5■■□□□ 1.19
EIF3B-207ENST00000465670 MYT1Q01538 1121 aa22.47■■□□□ 1.19
EIF3B-207ENST00000465670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
EIF3B-207ENST00000465670 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
EIF3B-207ENST00000465670 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
EIF3B-207ENST00000465670 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
EIF3B-207ENST00000465670 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
EIF3B-207ENST00000465670 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
EIF3B-207ENST00000465670 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
EIF3B-207ENST00000465670 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.135e-8■■■□□ 15.8
EIF3B-207ENST00000465670 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.12
EIF3B-207ENST00000465670 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
EIF3B-207ENST00000465670 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
EIF3B-207ENST00000465670 SMARCA4P51532 1647 aa22.01■■□□□ 1.11
EIF3B-207ENST00000465670 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
EIF3B-207ENST00000465670 UNC13AQ9UPW8 1703 aa21.98■■□□□ 1.11
EIF3B-207ENST00000465670 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
EIF3B-207ENST00000465670 SOGA1O94964 1423 aa21.92■■□□□ 1.1
EIF3B-207ENST00000465670 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
EIF3B-207ENST00000465670 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
EIF3B-207ENST00000465670 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
EIF3B-207ENST00000465670 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
EIF3B-207ENST00000465670 CSRNP3Q8WYN3 585 aa21.76■■□□□ 1.07
EIF3B-207ENST00000465670 MIER1Q8N108 512 aa21.74■■□□□ 1.07
EIF3B-207ENST00000465670 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
EIF3B-207ENST00000465670 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
EIF3B-207ENST00000465670 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.06
EIF3B-207ENST00000465670 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
EIF3B-207ENST00000465670 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
EIF3B-207ENST00000465670 EEA1Q15075 1411 aa21.53■■□□□ 1.04
EIF3B-207ENST00000465670 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
EIF3B-207ENST00000465670 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
EIF3B-207ENST00000465670 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
EIF3B-207ENST00000465670 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
EIF3B-207ENST00000465670 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
EIF3B-207ENST00000465670 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.01
EIF3B-207ENST00000465670 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
EIF3B-207ENST00000465670 CLIP1P30622 1438 aa21.38■■□□□ 1.01
EIF3B-207ENST00000465670 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
EIF3B-207ENST00000465670 APLP2Q06481 763 aa21.34■■□□□ 1.01
EIF3B-207ENST00000465670 ANP32EQ9BTT0 268 aa21.29■■□□□ 1
EIF3B-207ENST00000465670 BCL11AQ9H165 835 aa21.29■■□□□ 1
EIF3B-207ENST00000465670 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
EIF3B-207ENST00000465670 KIF21BO75037 1637 aa21.27■□□□□ 0.99
EIF3B-207ENST00000465670 VPS8Q8N3P4 1428 aa21.22■□□□□ 0.99
EIF3B-207ENST00000465670 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
EIF3B-207ENST00000465670 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
EIF3B-207ENST00000465670 BCANQ96GW7 911 aa21.09■□□□□ 0.97
EIF3B-207ENST00000465670 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
EIF3B-207ENST00000465670 CUX1P39880 1505 aa21■□□□□ 0.95
EIF3B-207ENST00000465670 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
EIF3B-207ENST00000465670 ITGAEP38570 1179 aa20.99■□□□□ 0.95
EIF3B-207ENST00000465670 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
EIF3B-207ENST00000465670 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
EIF3B-207ENST00000465670 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
EIF3B-207ENST00000465670 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
EIF3B-207ENST00000465670 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
EIF3B-207ENST00000465670 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
EIF3B-207ENST00000465670 HMGXB3Q12766 1538 aa20.89■□□□□ 0.93
EIF3B-207ENST00000465670 FKBP8Q14318 412 aa20.88■□□□□ 0.93
EIF3B-207ENST00000465670 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
EIF3B-207ENST00000465670 CFTRP13569 1480 aa20.84■□□□□ 0.93
EIF3B-207ENST00000465670 CUX2O14529 1486 aa20.8■□□□□ 0.92
EIF3B-207ENST00000465670 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
EIF3B-207ENST00000465670 ATP1B4Q9UN42 357 aaPredicted RBP20.79■□□□□ 0.92
EIF3B-207ENST00000465670 P3H3Q8IVL6 736 aa20.78■□□□□ 0.92
EIF3B-207ENST00000465670 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
EIF3B-207ENST00000465670 IGF1RP08069 1367 aa20.71■□□□□ 0.91
EIF3B-207ENST00000465670 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
EIF3B-207ENST00000465670 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms