RNA–Protein interactions for RNA: ENST00000464873.5

RUVBL1-202, Transcript of RuvB like AAA ATPase 1, humanhuman

TSL 2 BASIC

Gene RUVBL1, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUVBL1-202ENST00000464873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.69■□□□□ 0.742e-19■■■■■ 363.3
RUVBL1-202ENST00000464873 SF3B4Q15427 424 aaKnown RBP eCLIP16.01■□□□□ 0.154e-71■■■■■ 209.9
RUVBL1-202ENST00000464873 SF3A3Q12874 501 aaKnown RBP eCLIP18.8■□□□□ 0.61e-28■■■■■ 138.2
RUVBL1-202ENST00000464873 SF3B1O75533 1304 aaKnown RBP eCLIP18.68■□□□□ 0.584e-7■■■■■ 112.4
RUVBL1-202ENST00000464873 SMNDC1O75940 238 aaKnown RBP eCLIP17.72■□□□□ 0.438e-27■■■■■ 67.3
RUVBL1-202ENST00000464873 GPKOWQ92917 476 aaPredicted RBP eCLIP20.78■□□□□ 0.925e-12■■■■■ 58.5
RUVBL1-202ENST00000464873 DKC1O60832 514 aaKnown RBP eCLIP19.71■□□□□ 0.758e-10■■■■■ 55.6
RUVBL1-202ENST00000464873 NSUN2Q08J23 767 aaKnown RBP eCLIP18.14■□□□□ 0.498e-13■■■■■ 54.9
RUVBL1-202ENST00000464873 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.53■□□□□ 0.566e-9■■■■■ 50.5
RUVBL1-202ENST00000464873 SUB1P53999 127 aaKnown RBP eCLIP14.52□□□□□ -0.093e-11■■■■■ 47
RUVBL1-202ENST00000464873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.48■■□□□ 1.192e-9■■■■■ 42.1
RUVBL1-202ENST00000464873 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.49■□□□□ 0.718e-9■■■■■ 29.3
RUVBL1-202ENST00000464873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.01□□□□□ -0.173e-7■■■■□ 25.1
RUVBL1-202ENST00000464873 HNRNPLP14866 589 aaKnown RBP eCLIP18.14■□□□□ 0.51e-8■■■■□ 23
RUVBL1-202ENST00000464873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.48■■□□□ 1.674e-7■■■■□ 22.7
RUVBL1-202ENST00000464873 G3BP1Q13283 466 aaKnown RBP eCLIP22.12■■□□□ 1.135e-6■■■■□ 22.4
RUVBL1-202ENST00000464873 RBM22Q9NW64 420 aaKnown RBP eCLIP18.47■□□□□ 0.552e-7■■■■□ 22.2
RUVBL1-202ENST00000464873 ZNF622Q969S3 477 aaKnown RBP eCLIP20.79■□□□□ 0.924e-6■■■■□ 21.4
RUVBL1-202ENST00000464873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.24■□□□□ 0.192e-6■■■■□ 21.1
RUVBL1-202ENST00000464873 DDX6P26196 483 aaKnown RBP eCLIP17.91■□□□□ 0.466e-6■■■■□ 19.3
RUVBL1-202ENST00000464873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.71■□□□□ 0.592e-6■■■□□ 19.2
RUVBL1-202ENST00000464873 TIA1P31483 386 aaKnown RBP eCLIP17.45■□□□□ 0.381e-13■■■□□ 18.4
RUVBL1-202ENST00000464873 AGGF1Q8N302 714 aaeCLIP18.8■□□□□ 0.65e-8■■■□□ 18.1
RUVBL1-202ENST00000464873 DDX3XO00571 662 aaKnown RBP eCLIP19.72■□□□□ 0.751e-9■■■□□ 17.6
RUVBL1-202ENST00000464873 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.5■■□□□ 1.036e-6■■■□□ 16.7
RUVBL1-202ENST00000464873 RPS3P23396 243 aaKnown RBP eCLIP17.92■□□□□ 0.465e-7■■■□□ 15.2
RUVBL1-202ENST00000464873 GTF2F1P35269 517 aaKnown RBP eCLIP20.35■□□□□ 0.855e-7■■□□□ 14.4
RUVBL1-202ENST00000464873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.24■□□□□ 0.833e-7■■□□□ 14
RUVBL1-202ENST00000464873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.46■□□□□ 0.232e-6■■□□□ 13.8
RUVBL1-202ENST00000464873 FMR1Q06787 632 aaKnown RBP eCLIP20.62■□□□□ 0.891e-6■■□□□ 13.4
RUVBL1-202ENST00000464873 YBX3P16989 372 aaKnown RBP eCLIP19.72■□□□□ 0.755e-7■■□□□ 11.7
RUVBL1-202ENST00000464873 PUM1Q14671 1186 aaKnown RBP eCLIP17.15■□□□□ 0.343e-8■□□□□ 10.9
RUVBL1-202ENST00000464873 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.826e-10■□□□□ 9.8
RUVBL1-202ENST00000464873 SND1Q7KZF4 910 aaKnown RBP eCLIP19.48■□□□□ 0.713e-6■□□□□ 9.6
Retrieved 34 of 34 RNA–protein pairs in 8.6 ms