RNA–Protein interactions for RNA: ENST00000463330.5

BCCIP-204, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 3

Gene BCCIP, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-204ENST00000463330 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
BCCIP-204ENST00000463330 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
BCCIP-204ENST00000463330 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
BCCIP-204ENST00000463330 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
BCCIP-204ENST00000463330 FOXD1Q16676 465 aa14.87□□□□□ -0.03
BCCIP-204ENST00000463330 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
BCCIP-204ENST00000463330 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
BCCIP-204ENST00000463330 ADRA2BP18089 450 aa14.13□□□□□ -0.15
BCCIP-204ENST00000463330 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
BCCIP-204ENST00000463330 MSH5O43196 834 aa13.88□□□□□ -0.19
BCCIP-204ENST00000463330 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
BCCIP-204ENST00000463330 SCAF1Q9H7N4 1312 aaKnown RBP12.97□□□□□ -0.33
BCCIP-204ENST00000463330 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
BCCIP-204ENST00000463330 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
BCCIP-204ENST00000463330 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
BCCIP-204ENST00000463330 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
BCCIP-204ENST00000463330 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
BCCIP-204ENST00000463330 KCNA4P22459 653 aa12.42□□□□□ -0.42
BCCIP-204ENST00000463330 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
BCCIP-204ENST00000463330 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
BCCIP-204ENST00000463330 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
BCCIP-204ENST00000463330 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
BCCIP-204ENST00000463330 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
BCCIP-204ENST00000463330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■□□ 15.2
BCCIP-204ENST00000463330 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
BCCIP-204ENST00000463330 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
BCCIP-204ENST00000463330 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
BCCIP-204ENST00000463330 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
BCCIP-204ENST00000463330 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
BCCIP-204ENST00000463330 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
BCCIP-204ENST00000463330 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
BCCIP-204ENST00000463330 ZBTB22O15209 634 aa11.44□□□□□ -0.58
BCCIP-204ENST00000463330 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
BCCIP-204ENST00000463330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
BCCIP-204ENST00000463330 CAPN15O75808 1086 aa11.39□□□□□ -0.59
BCCIP-204ENST00000463330 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
BCCIP-204ENST00000463330 APLP2Q06481 763 aa11.37□□□□□ -0.59
BCCIP-204ENST00000463330 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
BCCIP-204ENST00000463330 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
BCCIP-204ENST00000463330 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
BCCIP-204ENST00000463330 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
BCCIP-204ENST00000463330 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
BCCIP-204ENST00000463330 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-204ENST00000463330 DSG3P32926 999 aa11.17□□□□□ -0.62
BCCIP-204ENST00000463330 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
BCCIP-204ENST00000463330 ABCB7O75027 752 aa11.13□□□□□ -0.63
BCCIP-204ENST00000463330 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
BCCIP-204ENST00000463330 POLA2Q14181 598 aa10.97□□□□□ -0.65
BCCIP-204ENST00000463330 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
BCCIP-204ENST00000463330 RBM42Q9BTD8 480 aaKnown RBP10.71□□□□□ -0.69
BCCIP-204ENST00000463330 FBLN2P98095 1184 aa10.66□□□□□ -0.7
BCCIP-204ENST00000463330 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
BCCIP-204ENST00000463330 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
BCCIP-204ENST00000463330 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
BCCIP-204ENST00000463330 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
BCCIP-204ENST00000463330 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
BCCIP-204ENST00000463330 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
BCCIP-204ENST00000463330 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
BCCIP-204ENST00000463330 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
BCCIP-204ENST00000463330 REM2Q8IYK8 340 aaPredicted RBP10.37□□□□□ -0.75
BCCIP-204ENST00000463330 CHRDL2Q6WN34 429 aa10.35□□□□□ -0.75
BCCIP-204ENST00000463330 POTEHQ6S545 545 aa10.34□□□□□ -0.75
BCCIP-204ENST00000463330 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
BCCIP-204ENST00000463330 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
BCCIP-204ENST00000463330 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
BCCIP-204ENST00000463330 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
BCCIP-204ENST00000463330 SPDYE1Q8NFV5 336 aaPredicted RBP10.23□□□□□ -0.77
BCCIP-204ENST00000463330 PROM2Q8N271 834 aa10.14□□□□□ -0.79
BCCIP-204ENST00000463330 PIP4P2Q8N4L2 257 aa10.14□□□□□ -0.79
BCCIP-204ENST00000463330 FKBP8Q14318 412 aa10.12□□□□□ -0.79
BCCIP-204ENST00000463330 FXR2P51116 673 aaKnown RBP eCLIP10.1□□□□□ -0.79
BCCIP-204ENST00000463330 PRR29P0C7W0 189 aa10.09□□□□□ -0.79
BCCIP-204ENST00000463330 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
BCCIP-204ENST00000463330 STAG3Q9UJ98 1225 aa10.04□□□□□ -0.8
BCCIP-204ENST00000463330 HAX1O00165 279 aa9.97□□□□□ -0.81
BCCIP-204ENST00000463330 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
BCCIP-204ENST00000463330 CREBZFQ9NS37 354 aa9.9□□□□□ -0.82
BCCIP-204ENST00000463330 FARP1Q9Y4F1 1045 aaPredicted RBP9.83□□□□□ -0.84
BCCIP-204ENST00000463330 SP7Q8TDD2 431 aaPredicted RBP9.81□□□□□ -0.84
BCCIP-204ENST00000463330 FBXO3Q9UK99 471 aa9.81□□□□□ -0.84
BCCIP-204ENST00000463330 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
BCCIP-204ENST00000463330 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
BCCIP-204ENST00000463330 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
BCCIP-204ENST00000463330 MIER1Q8N108 512 aa9.76□□□□□ -0.85
BCCIP-204ENST00000463330 NPM1P06748 294 aaKnown RBP eCLIP9.74□□□□□ -0.85
BCCIP-204ENST00000463330 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
BCCIP-204ENST00000463330 EVX2Q03828 476 aa9.74□□□□□ -0.85
BCCIP-204ENST00000463330 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
BCCIP-204ENST00000463330 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
BCCIP-204ENST00000463330 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
BCCIP-204ENST00000463330 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
BCCIP-204ENST00000463330 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
BCCIP-204ENST00000463330 GABBR2O75899 941 aa9.58□□□□□ -0.88
BCCIP-204ENST00000463330 NUBP1P53384 320 aa9.57□□□□□ -0.88
BCCIP-204ENST00000463330 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
BCCIP-204ENST00000463330 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
BCCIP-204ENST00000463330 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
BCCIP-204ENST00000463330 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
BCCIP-204ENST00000463330 CLCN6P51797 869 aa9.53□□□□□ -0.88
BCCIP-204ENST00000463330 KLHL34Q8N239 644 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms