RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
CHAMP1-202ENST00000463003 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
CHAMP1-202ENST00000463003 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
CHAMP1-202ENST00000463003 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
CHAMP1-202ENST00000463003 FOXD1Q16676 465 aa21.36■■□□□ 1.01
CHAMP1-202ENST00000463003 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
CHAMP1-202ENST00000463003 MSH5O43196 834 aa20.06■□□□□ 0.8
CHAMP1-202ENST00000463003 PIAS4Q8N2W9 510 aaPredicted RBP20.01■□□□□ 0.79
CHAMP1-202ENST00000463003 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
CHAMP1-202ENST00000463003 ADRA2BP18089 450 aa19.92■□□□□ 0.78
CHAMP1-202ENST00000463003 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
CHAMP1-202ENST00000463003 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
CHAMP1-202ENST00000463003 MAPK8IP2Q13387 824 aaPredicted RBP18.26■□□□□ 0.51
CHAMP1-202ENST00000463003 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
CHAMP1-202ENST00000463003 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
CHAMP1-202ENST00000463003 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
CHAMP1-202ENST00000463003 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
CHAMP1-202ENST00000463003 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
CHAMP1-202ENST00000463003 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
CHAMP1-202ENST00000463003 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
CHAMP1-202ENST00000463003 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
CHAMP1-202ENST00000463003 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
CHAMP1-202ENST00000463003 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
CHAMP1-202ENST00000463003 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
CHAMP1-202ENST00000463003 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
CHAMP1-202ENST00000463003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHAMP1-202ENST00000463003 KCNA4P22459 653 aa16.7■□□□□ 0.26
CHAMP1-202ENST00000463003 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
CHAMP1-202ENST00000463003 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
CHAMP1-202ENST00000463003 CAPN15O75808 1086 aa16.11■□□□□ 0.17
CHAMP1-202ENST00000463003 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
CHAMP1-202ENST00000463003 APLP2Q06481 763 aa16.05■□□□□ 0.16
CHAMP1-202ENST00000463003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
CHAMP1-202ENST00000463003 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
CHAMP1-202ENST00000463003 DSG3P32926 999 aa15.99■□□□□ 0.15
CHAMP1-202ENST00000463003 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
CHAMP1-202ENST00000463003 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
CHAMP1-202ENST00000463003 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
CHAMP1-202ENST00000463003 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
CHAMP1-202ENST00000463003 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
CHAMP1-202ENST00000463003 ABCB7O75027 752 aa15.71■□□□□ 0.11
CHAMP1-202ENST00000463003 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
CHAMP1-202ENST00000463003 POLA2Q14181 598 aa15.44■□□□□ 0.06
CHAMP1-202ENST00000463003 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
CHAMP1-202ENST00000463003 ZBTB22O15209 634 aa15.33■□□□□ 0.04
CHAMP1-202ENST00000463003 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
CHAMP1-202ENST00000463003 POTEHQ6S545 545 aa15.26■□□□□ 0.03
CHAMP1-202ENST00000463003 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
CHAMP1-202ENST00000463003 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
CHAMP1-202ENST00000463003 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
CHAMP1-202ENST00000463003 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CHAMP1-202ENST00000463003 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
CHAMP1-202ENST00000463003 FBLN2P98095 1184 aa14.84□□□□□ -0.03
CHAMP1-202ENST00000463003 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
CHAMP1-202ENST00000463003 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
CHAMP1-202ENST00000463003 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
CHAMP1-202ENST00000463003 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
CHAMP1-202ENST00000463003 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
CHAMP1-202ENST00000463003 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
CHAMP1-202ENST00000463003 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
CHAMP1-202ENST00000463003 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
CHAMP1-202ENST00000463003 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
CHAMP1-202ENST00000463003 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
CHAMP1-202ENST00000463003 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
CHAMP1-202ENST00000463003 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
CHAMP1-202ENST00000463003 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
CHAMP1-202ENST00000463003 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
CHAMP1-202ENST00000463003 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
CHAMP1-202ENST00000463003 HAX1O00165 279 aa14.31□□□□□ -0.12
CHAMP1-202ENST00000463003 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHAMP1-202ENST00000463003 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
CHAMP1-202ENST00000463003 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
CHAMP1-202ENST00000463003 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
CHAMP1-202ENST00000463003 EVX2Q03828 476 aa14.05□□□□□ -0.16
CHAMP1-202ENST00000463003 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
CHAMP1-202ENST00000463003 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
CHAMP1-202ENST00000463003 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
CHAMP1-202ENST00000463003 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
CHAMP1-202ENST00000463003 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
CHAMP1-202ENST00000463003 GABBR2O75899 941 aa13.8□□□□□ -0.2
CHAMP1-202ENST00000463003 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
CHAMP1-202ENST00000463003 CLCN6P51797 869 aa13.72□□□□□ -0.21
CHAMP1-202ENST00000463003 PROM2Q8N271 834 aa13.69□□□□□ -0.22
CHAMP1-202ENST00000463003 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHAMP1-202ENST00000463003 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
CHAMP1-202ENST00000463003 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
CHAMP1-202ENST00000463003 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
CHAMP1-202ENST00000463003 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
CHAMP1-202ENST00000463003 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
CHAMP1-202ENST00000463003 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
CHAMP1-202ENST00000463003 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
CHAMP1-202ENST00000463003 LHX8Q68G74 356 aa13.44□□□□□ -0.26
CHAMP1-202ENST00000463003 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
CHAMP1-202ENST00000463003 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CHAMP1-202ENST00000463003 MIER1Q8N108 512 aa13.38□□□□□ -0.27
CHAMP1-202ENST00000463003 FKBP8Q14318 412 aa13.35□□□□□ -0.27
CHAMP1-202ENST00000463003 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
CHAMP1-202ENST00000463003 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
CHAMP1-202ENST00000463003 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
CHAMP1-202ENST00000463003 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms