RNA–Protein interactions for RNA: ENST00000462231.5

PARD3B-206, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD3B, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-206ENST00000462231 NISCHQ9Y2I1 1504 aa34.11■■■■□ 3.05
PARD3B-206ENST00000462231 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
PARD3B-206ENST00000462231 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
PARD3B-206ENST00000462231 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
PARD3B-206ENST00000462231 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
PARD3B-206ENST00000462231 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
PARD3B-206ENST00000462231 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
PARD3B-206ENST00000462231 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
PARD3B-206ENST00000462231 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
PARD3B-206ENST00000462231 HRCP23327 699 aa28.78■■■□□ 2.2
PARD3B-206ENST00000462231 CCDC180Q9P1Z9 1646 aa28.59■■■□□ 2.17
PARD3B-206ENST00000462231 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
PARD3B-206ENST00000462231 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
PARD3B-206ENST00000462231 FAM9AQ8IZU1 332 aaPredicted RBP27.87■■■□□ 2.05
PARD3B-206ENST00000462231 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
PARD3B-206ENST00000462231 TRIM26Q12899 539 aaPredicted RBP27.64■■■□□ 2.02
PARD3B-206ENST00000462231 TRIM41Q8WV44 630 aa27.41■■□□□ 1.98
PARD3B-206ENST00000462231 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
PARD3B-206ENST00000462231 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
PARD3B-206ENST00000462231 ABCC9O60706 1549 aa27.24■■□□□ 1.95
PARD3B-206ENST00000462231 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.95
PARD3B-206ENST00000462231 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
PARD3B-206ENST00000462231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.06■■□□□ 1.92
PARD3B-206ENST00000462231 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
PARD3B-206ENST00000462231 ZEB1P37275 1124 aaPredicted RBP26.91■■□□□ 1.9
PARD3B-206ENST00000462231 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
PARD3B-206ENST00000462231 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
PARD3B-206ENST00000462231 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
PARD3B-206ENST00000462231 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
PARD3B-206ENST00000462231 NACADO15069 1562 aa26.53■■□□□ 1.84
PARD3B-206ENST00000462231 WIZO95785 1651 aa26.51■■□□□ 1.83
PARD3B-206ENST00000462231 GTF3C3Q9Y5Q9 886 aa26.46■■□□□ 1.83
PARD3B-206ENST00000462231 ACIN1Q9UKV3 1341 aaKnown RBP26.46■■□□□ 1.83
PARD3B-206ENST00000462231 YTHDC1Q96MU7 727 aaKnown RBP26.45■■□□□ 1.82
PARD3B-206ENST00000462231 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
PARD3B-206ENST00000462231 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
PARD3B-206ENST00000462231 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
PARD3B-206ENST00000462231 UBTFP17480 764 aaKnown RBP26.2■■□□□ 1.79
PARD3B-206ENST00000462231 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
PARD3B-206ENST00000462231 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
PARD3B-206ENST00000462231 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
PARD3B-206ENST00000462231 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
PARD3B-206ENST00000462231 SOGA1O94964 1423 aa26.09■■□□□ 1.77
PARD3B-206ENST00000462231 CENPBP07199 599 aaPredicted RBP26.07■■□□□ 1.76
PARD3B-206ENST00000462231 RUSC2Q8N2Y8 1516 aa26.02■■□□□ 1.76
PARD3B-206ENST00000462231 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
PARD3B-206ENST00000462231 CEP162Q5TB80 1403 aa26■■□□□ 1.75
PARD3B-206ENST00000462231 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
PARD3B-206ENST00000462231 MIER1Q8N108 512 aa25.96■■□□□ 1.75
PARD3B-206ENST00000462231 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
PARD3B-206ENST00000462231 ZNF316A6NFI3 1004 aaPredicted RBP25.92■■□□□ 1.74
PARD3B-206ENST00000462231 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
PARD3B-206ENST00000462231 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
PARD3B-206ENST00000462231 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
PARD3B-206ENST00000462231 TNIKQ9UKE5 1360 aa25.71■■□□□ 1.71
PARD3B-206ENST00000462231 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
PARD3B-206ENST00000462231 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
PARD3B-206ENST00000462231 EEA1Q15075 1411 aa25.54■■□□□ 1.68
PARD3B-206ENST00000462231 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
PARD3B-206ENST00000462231 APLP2Q06481 763 aa25.5■■□□□ 1.67
PARD3B-206ENST00000462231 ITGAEP38570 1179 aa25.46■■□□□ 1.67
PARD3B-206ENST00000462231 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
PARD3B-206ENST00000462231 CLIP1P30622 1438 aa25.4■■□□□ 1.66
PARD3B-206ENST00000462231 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
PARD3B-206ENST00000462231 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
PARD3B-206ENST00000462231 KCNH8Q96L42 1107 aa25.31■■□□□ 1.64
PARD3B-206ENST00000462231 RAPGEF2Q9Y4G8 1499 aa25.29■■□□□ 1.64
PARD3B-206ENST00000462231 KANK4Q5T7N3 995 aaPredicted RBP25.29■■□□□ 1.64
PARD3B-206ENST00000462231 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
PARD3B-206ENST00000462231 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
PARD3B-206ENST00000462231 BCANQ96GW7 911 aa25.23■■□□□ 1.63
PARD3B-206ENST00000462231 PEG3Q9GZU2 1588 aa25.19■■□□□ 1.62
PARD3B-206ENST00000462231 VPS8Q8N3P4 1428 aa25.18■■□□□ 1.62
PARD3B-206ENST00000462231 SUPT16HQ9Y5B9 1047 aaKnown RBP25.17■■□□□ 1.62
PARD3B-206ENST00000462231 KIF21BO75037 1637 aa25.15■■□□□ 1.62
PARD3B-206ENST00000462231 HIRIP3Q9BW71 556 aaPredicted RBP25.1■■□□□ 1.61
PARD3B-206ENST00000462231 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
PARD3B-206ENST00000462231 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
PARD3B-206ENST00000462231 TSHZ2Q9NRE2 1034 aa24.93■■□□□ 1.58
PARD3B-206ENST00000462231 TOP2BQ02880 1626 aa24.92■■□□□ 1.58
PARD3B-206ENST00000462231 DDX10Q13206 875 aaKnown RBP24.9■■□□□ 1.58
PARD3B-206ENST00000462231 SIN3AQ96ST3 1273 aa24.9■■□□□ 1.58
PARD3B-206ENST00000462231 MYT1Q01538 1121 aa24.89■■□□□ 1.58
PARD3B-206ENST00000462231 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
PARD3B-206ENST00000462231 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
PARD3B-206ENST00000462231 PRXQ9BXM0 1461 aa24.81■■□□□ 1.56
PARD3B-206ENST00000462231 FKBP8Q14318 412 aa24.8■■□□□ 1.56
PARD3B-206ENST00000462231 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
PARD3B-206ENST00000462231 FAM50AQ14320 339 aaKnown RBP24.78■■□□□ 1.56
PARD3B-206ENST00000462231 CUX1P39880 1505 aa24.77■■□□□ 1.56
PARD3B-206ENST00000462231 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
PARD3B-206ENST00000462231 BIVM-ERCC5R4GMW8 1640 aa24.73■■□□□ 1.55
PARD3B-206ENST00000462231 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
PARD3B-206ENST00000462231 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
PARD3B-206ENST00000462231 CCNB3Q8WWL7 1395 aa24.68■■□□□ 1.54
PARD3B-206ENST00000462231 NCAPD3P42695 1498 aa24.65■■□□□ 1.54
PARD3B-206ENST00000462231 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
PARD3B-206ENST00000462231 IRX6P78412 446 aaPredicted RBP24.6■■□□□ 1.53
PARD3B-206ENST00000462231 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
PARD3B-206ENST00000462231 CUX2O14529 1486 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms