RNA–Protein interactions for RNA: ENST00000461882.1

CCDC146-205, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-205ENST00000461882 AEBP2Q6ZN18 517 aaPredicted RBP29.45■■■□□ 2.31
CCDC146-205ENST00000461882 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
CCDC146-205ENST00000461882 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
CCDC146-205ENST00000461882 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
CCDC146-205ENST00000461882 FOXD1Q16676 465 aa23.56■■□□□ 1.36
CCDC146-205ENST00000461882 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
CCDC146-205ENST00000461882 MSH5O43196 834 aa22.19■■□□□ 1.14
CCDC146-205ENST00000461882 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
CCDC146-205ENST00000461882 PIAS4Q8N2W9 510 aaPredicted RBP21.7■■□□□ 1.06
CCDC146-205ENST00000461882 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
CCDC146-205ENST00000461882 ADRA2BP18089 450 aa21.54■■□□□ 1.04
CCDC146-205ENST00000461882 MAPK8IP2Q13387 824 aaPredicted RBP19.85■□□□□ 0.77
CCDC146-205ENST00000461882 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
CCDC146-205ENST00000461882 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
CCDC146-205ENST00000461882 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
CCDC146-205ENST00000461882 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
CCDC146-205ENST00000461882 DCAF8L1A6NGE4 600 aa19■□□□□ 0.63
CCDC146-205ENST00000461882 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
CCDC146-205ENST00000461882 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
CCDC146-205ENST00000461882 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
CCDC146-205ENST00000461882 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
CCDC146-205ENST00000461882 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
CCDC146-205ENST00000461882 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
CCDC146-205ENST00000461882 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
CCDC146-205ENST00000461882 KCNA4P22459 653 aa18.11■□□□□ 0.49
CCDC146-205ENST00000461882 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
CCDC146-205ENST00000461882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC146-205ENST00000461882 POTEHQ6S545 545 aa18.01■□□□□ 0.47
CCDC146-205ENST00000461882 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
CCDC146-205ENST00000461882 DSG3P32926 999 aa17.5■□□□□ 0.39
CCDC146-205ENST00000461882 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
CCDC146-205ENST00000461882 CAPN15O75808 1086 aa17.46■□□□□ 0.39
CCDC146-205ENST00000461882 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
CCDC146-205ENST00000461882 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
CCDC146-205ENST00000461882 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
CCDC146-205ENST00000461882 ABCB7O75027 752 aa17.07■□□□□ 0.32
CCDC146-205ENST00000461882 APLP2Q06481 763 aa17.06■□□□□ 0.32
CCDC146-205ENST00000461882 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
CCDC146-205ENST00000461882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
CCDC146-205ENST00000461882 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
CCDC146-205ENST00000461882 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
CCDC146-205ENST00000461882 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
CCDC146-205ENST00000461882 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
CCDC146-205ENST00000461882 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
CCDC146-205ENST00000461882 ZBTB22O15209 634 aa16.64■□□□□ 0.25
CCDC146-205ENST00000461882 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
CCDC146-205ENST00000461882 POLA2Q14181 598 aa16.6■□□□□ 0.25
CCDC146-205ENST00000461882 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
CCDC146-205ENST00000461882 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
CCDC146-205ENST00000461882 SP7Q8TDD2 431 aaPredicted RBP16.47■□□□□ 0.23
CCDC146-205ENST00000461882 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
CCDC146-205ENST00000461882 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
CCDC146-205ENST00000461882 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
CCDC146-205ENST00000461882 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
CCDC146-205ENST00000461882 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
CCDC146-205ENST00000461882 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
CCDC146-205ENST00000461882 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
CCDC146-205ENST00000461882 HAX1O00165 279 aa15.9■□□□□ 0.14
CCDC146-205ENST00000461882 EVX2Q03828 476 aa15.89■□□□□ 0.13
CCDC146-205ENST00000461882 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
CCDC146-205ENST00000461882 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
CCDC146-205ENST00000461882 FBLN2P98095 1184 aa15.74■□□□□ 0.11
CCDC146-205ENST00000461882 SPDYE2BA6NHP3 402 aa15.68■□□□□ 0.1
CCDC146-205ENST00000461882 SPDYE6P0CI01 402 aa15.68■□□□□ 0.1
CCDC146-205ENST00000461882 SPDYE2Q495Y8 402 aa15.68■□□□□ 0.1
CCDC146-205ENST00000461882 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
CCDC146-205ENST00000461882 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
CCDC146-205ENST00000461882 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
CCDC146-205ENST00000461882 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
CCDC146-205ENST00000461882 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
CCDC146-205ENST00000461882 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
CCDC146-205ENST00000461882 LHX8Q68G74 356 aa15.4■□□□□ 0.06
CCDC146-205ENST00000461882 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
CCDC146-205ENST00000461882 GABBR2O75899 941 aa15.35■□□□□ 0.05
CCDC146-205ENST00000461882 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC146-205ENST00000461882 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
CCDC146-205ENST00000461882 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
CCDC146-205ENST00000461882 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
CCDC146-205ENST00000461882 PLSCR2Q9NRY7 297 aa15.08■□□□□ 0
CCDC146-205ENST00000461882 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
CCDC146-205ENST00000461882 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
CCDC146-205ENST00000461882 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
CCDC146-205ENST00000461882 FKBP8Q14318 412 aa14.94□□□□□ -0.02
CCDC146-205ENST00000461882 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
CCDC146-205ENST00000461882 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
CCDC146-205ENST00000461882 PROM2Q8N271 834 aa14.73□□□□□ -0.05
CCDC146-205ENST00000461882 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
CCDC146-205ENST00000461882 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
CCDC146-205ENST00000461882 CLCN6P51797 869 aa14.66□□□□□ -0.06
CCDC146-205ENST00000461882 ZNF579Q8NAF0 562 aaKnown RBP14.66□□□□□ -0.06
CCDC146-205ENST00000461882 POTEB2H3BUK9 544 aa14.64□□□□□ -0.07
CCDC146-205ENST00000461882 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
CCDC146-205ENST00000461882 POTEMA6NI47 508 aa14.57□□□□□ -0.08
CCDC146-205ENST00000461882 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
CCDC146-205ENST00000461882 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
CCDC146-205ENST00000461882 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
CCDC146-205ENST00000461882 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
CCDC146-205ENST00000461882 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC146-205ENST00000461882 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
CCDC146-205ENST00000461882 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms