RNA–Protein interactions for RNA: ENST00000461352.5

SFXN5-207, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 3,578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-207ENST00000461352 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
SFXN5-207ENST00000461352 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
SFXN5-207ENST00000461352 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
SFXN5-207ENST00000461352 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
SFXN5-207ENST00000461352 ABCC9O60706 1549 aa20.55■□□□□ 0.88
SFXN5-207ENST00000461352 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
SFXN5-207ENST00000461352 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
SFXN5-207ENST00000461352 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.82
SFXN5-207ENST00000461352 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
SFXN5-207ENST00000461352 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
SFXN5-207ENST00000461352 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
SFXN5-207ENST00000461352 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
SFXN5-207ENST00000461352 LOC105371045A0A1W2PR82 267 aa19.59■□□□□ 0.73
SFXN5-207ENST00000461352 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
SFXN5-207ENST00000461352 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
SFXN5-207ENST00000461352 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
SFXN5-207ENST00000461352 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
SFXN5-207ENST00000461352 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
SFXN5-207ENST00000461352 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
SFXN5-207ENST00000461352 NACADO15069 1562 aa19.23■□□□□ 0.67
SFXN5-207ENST00000461352 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
SFXN5-207ENST00000461352 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
SFXN5-207ENST00000461352 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
SFXN5-207ENST00000461352 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
SFXN5-207ENST00000461352 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
SFXN5-207ENST00000461352 WIZO95785 1651 aa18.91■□□□□ 0.62
SFXN5-207ENST00000461352 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
SFXN5-207ENST00000461352 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
SFXN5-207ENST00000461352 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
SFXN5-207ENST00000461352 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
SFXN5-207ENST00000461352 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
SFXN5-207ENST00000461352 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
SFXN5-207ENST00000461352 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
SFXN5-207ENST00000461352 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
SFXN5-207ENST00000461352 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
SFXN5-207ENST00000461352 SOGA1O94964 1423 aa18.44■□□□□ 0.54
SFXN5-207ENST00000461352 CSRNP3Q8WYN3 585 aa18.44■□□□□ 0.54
SFXN5-207ENST00000461352 ATP1B4Q9UN42 357 aaPredicted RBP18.43■□□□□ 0.54
SFXN5-207ENST00000461352 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
SFXN5-207ENST00000461352 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-207ENST00000461352 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
SFXN5-207ENST00000461352 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
SFXN5-207ENST00000461352 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
SFXN5-207ENST00000461352 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.521e-6■■■■■ 58.5
SFXN5-207ENST00000461352 APLP2Q06481 763 aa18.29■□□□□ 0.52
SFXN5-207ENST00000461352 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
SFXN5-207ENST00000461352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
SFXN5-207ENST00000461352 HRCP23327 699 aa18.24■□□□□ 0.51
SFXN5-207ENST00000461352 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
SFXN5-207ENST00000461352 ITGAEP38570 1179 aa18.19■□□□□ 0.5
SFXN5-207ENST00000461352 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
SFXN5-207ENST00000461352 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
SFXN5-207ENST00000461352 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
SFXN5-207ENST00000461352 CEP162Q5TB80 1403 aa18.03■□□□□ 0.48
SFXN5-207ENST00000461352 NESP48681 1621 aa18■□□□□ 0.47
SFXN5-207ENST00000461352 FBLN2P98095 1184 aa17.99■□□□□ 0.47
SFXN5-207ENST00000461352 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
SFXN5-207ENST00000461352 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
SFXN5-207ENST00000461352 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
SFXN5-207ENST00000461352 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
SFXN5-207ENST00000461352 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
SFXN5-207ENST00000461352 CLIP1P30622 1438 aa17.88■□□□□ 0.45
SFXN5-207ENST00000461352 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
SFXN5-207ENST00000461352 CUX2O14529 1486 aa17.86■□□□□ 0.45
SFXN5-207ENST00000461352 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
SFXN5-207ENST00000461352 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
SFXN5-207ENST00000461352 RAD54L2Q9Y4B4 1467 aa17.79■□□□□ 0.44
SFXN5-207ENST00000461352 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
SFXN5-207ENST00000461352 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
SFXN5-207ENST00000461352 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
SFXN5-207ENST00000461352 FAM50AQ14320 339 aaKnown RBP17.76■□□□□ 0.43
SFXN5-207ENST00000461352 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
SFXN5-207ENST00000461352 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
SFXN5-207ENST00000461352 CFTRP13569 1480 aa17.74■□□□□ 0.43
SFXN5-207ENST00000461352 CUX1P39880 1505 aa17.73■□□□□ 0.43
SFXN5-207ENST00000461352 EEA1Q15075 1411 aa17.73■□□□□ 0.43
SFXN5-207ENST00000461352 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
SFXN5-207ENST00000461352 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
SFXN5-207ENST00000461352 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
SFXN5-207ENST00000461352 IGF1RP08069 1367 aa17.63■□□□□ 0.41
SFXN5-207ENST00000461352 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
SFXN5-207ENST00000461352 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
SFXN5-207ENST00000461352 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
SFXN5-207ENST00000461352 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
SFXN5-207ENST00000461352 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
SFXN5-207ENST00000461352 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■■■□ 22.1
SFXN5-207ENST00000461352 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
SFXN5-207ENST00000461352 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
SFXN5-207ENST00000461352 CHIC2Q9UKJ5 165 aa17.48■□□□□ 0.39
SFXN5-207ENST00000461352 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
SFXN5-207ENST00000461352 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
SFXN5-207ENST00000461352 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
SFXN5-207ENST00000461352 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
SFXN5-207ENST00000461352 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
SFXN5-207ENST00000461352 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
SFXN5-207ENST00000461352 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
SFXN5-207ENST00000461352 KIF21BO75037 1637 aa17.4■□□□□ 0.38
SFXN5-207ENST00000461352 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
SFXN5-207ENST00000461352 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
SFXN5-207ENST00000461352 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms