RNA–Protein interactions for RNA: ENST00000461084.5

KLHL18-205, Transcript of kelch like family member 18, humanhuman

TSL 2

Gene KLHL18, Length 3,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL18-205ENST00000461084 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
KLHL18-205ENST00000461084 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
KLHL18-205ENST00000461084 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
KLHL18-205ENST00000461084 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.81
KLHL18-205ENST00000461084 ABCC9O60706 1549 aa19.59■□□□□ 0.73
KLHL18-205ENST00000461084 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
KLHL18-205ENST00000461084 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
KLHL18-205ENST00000461084 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
KLHL18-205ENST00000461084 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.63
KLHL18-205ENST00000461084 SCRIBQ14160 1630 aa19■□□□□ 0.63
KLHL18-205ENST00000461084 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
KLHL18-205ENST00000461084 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
KLHL18-205ENST00000461084 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
KLHL18-205ENST00000461084 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
KLHL18-205ENST00000461084 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
KLHL18-205ENST00000461084 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
KLHL18-205ENST00000461084 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
KLHL18-205ENST00000461084 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
KLHL18-205ENST00000461084 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
KLHL18-205ENST00000461084 NACADO15069 1562 aa18.28■□□□□ 0.52
KLHL18-205ENST00000461084 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.51
KLHL18-205ENST00000461084 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
KLHL18-205ENST00000461084 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
KLHL18-205ENST00000461084 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
KLHL18-205ENST00000461084 WIZO95785 1651 aa18.13■□□□□ 0.49
KLHL18-205ENST00000461084 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
KLHL18-205ENST00000461084 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
KLHL18-205ENST00000461084 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
KLHL18-205ENST00000461084 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
KLHL18-205ENST00000461084 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
KLHL18-205ENST00000461084 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
KLHL18-205ENST00000461084 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
KLHL18-205ENST00000461084 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
KLHL18-205ENST00000461084 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
KLHL18-205ENST00000461084 SOGA1O94964 1423 aa17.6■□□□□ 0.41
KLHL18-205ENST00000461084 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.41
KLHL18-205ENST00000461084 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
KLHL18-205ENST00000461084 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
KLHL18-205ENST00000461084 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
KLHL18-205ENST00000461084 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
KLHL18-205ENST00000461084 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
KLHL18-205ENST00000461084 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
KLHL18-205ENST00000461084 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
KLHL18-205ENST00000461084 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
KLHL18-205ENST00000461084 TRIM26Q12899 539 aaPredicted RBP17.33■□□□□ 0.37
KLHL18-205ENST00000461084 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
KLHL18-205ENST00000461084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
KLHL18-205ENST00000461084 HRCP23327 699 aa17.25■□□□□ 0.35
KLHL18-205ENST00000461084 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
KLHL18-205ENST00000461084 NESP48681 1621 aa17.23■□□□□ 0.35
KLHL18-205ENST00000461084 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
KLHL18-205ENST00000461084 ITGAEP38570 1179 aa17.19■□□□□ 0.34
KLHL18-205ENST00000461084 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
KLHL18-205ENST00000461084 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
KLHL18-205ENST00000461084 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
KLHL18-205ENST00000461084 APLP2Q06481 763 aa17.1■□□□□ 0.33
KLHL18-205ENST00000461084 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
KLHL18-205ENST00000461084 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.33
KLHL18-205ENST00000461084 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
KLHL18-205ENST00000461084 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
KLHL18-205ENST00000461084 FBLN2P98095 1184 aa17■□□□□ 0.31
KLHL18-205ENST00000461084 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
KLHL18-205ENST00000461084 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
KLHL18-205ENST00000461084 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
KLHL18-205ENST00000461084 CUX2O14529 1486 aa16.96■□□□□ 0.31
KLHL18-205ENST00000461084 CUX1P39880 1505 aa16.95■□□□□ 0.3
KLHL18-205ENST00000461084 CLIP1P30622 1438 aa16.94■□□□□ 0.3
KLHL18-205ENST00000461084 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
KLHL18-205ENST00000461084 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
KLHL18-205ENST00000461084 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
KLHL18-205ENST00000461084 CFTRP13569 1480 aa16.9■□□□□ 0.3
KLHL18-205ENST00000461084 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
KLHL18-205ENST00000461084 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
KLHL18-205ENST00000461084 HMGXB3Q12766 1538 aa16.83■□□□□ 0.29
KLHL18-205ENST00000461084 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
KLHL18-205ENST00000461084 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
KLHL18-205ENST00000461084 IGF1RP08069 1367 aa16.76■□□□□ 0.27
KLHL18-205ENST00000461084 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
KLHL18-205ENST00000461084 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
KLHL18-205ENST00000461084 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
KLHL18-205ENST00000461084 EEA1Q15075 1411 aa16.72■□□□□ 0.27
KLHL18-205ENST00000461084 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
KLHL18-205ENST00000461084 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
KLHL18-205ENST00000461084 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
KLHL18-205ENST00000461084 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
KLHL18-205ENST00000461084 FHOD3Q2V2M9 1422 aa16.63■□□□□ 0.25
KLHL18-205ENST00000461084 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
KLHL18-205ENST00000461084 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
KLHL18-205ENST00000461084 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
KLHL18-205ENST00000461084 KIF21BO75037 1637 aa16.59■□□□□ 0.25
KLHL18-205ENST00000461084 PRXQ9BXM0 1461 aa16.58■□□□□ 0.24
KLHL18-205ENST00000461084 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
KLHL18-205ENST00000461084 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
KLHL18-205ENST00000461084 NEUROD1Q13562 356 aa16.53■□□□□ 0.24
KLHL18-205ENST00000461084 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
KLHL18-205ENST00000461084 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
KLHL18-205ENST00000461084 ZNF608Q9ULD9 1512 aaPredicted RBP16.52■□□□□ 0.23
KLHL18-205ENST00000461084 ARHGAP35Q9NRY4 1499 aa16.51■□□□□ 0.23
KLHL18-205ENST00000461084 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
KLHL18-205ENST00000461084 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms