RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.34	■□□□□ 0.21
FXR1-204	ENST00000461044	CHIC1	Q5VXU3	224 aa		15.75	■□□□□ 0.11
FXR1-204	ENST00000461044	PHF23	Q9BUL5	403 aa	Predicted RBP	13.91	□□□□□ -0.18
FXR1-204	ENST00000461044	SENP3	Q9H4L4	574 aa	Predicted RBP	13.75	□□□□□ -0.21
FXR1-204	ENST00000461044	FOXD1	Q16676	465 aa		12.87	□□□□□ -0.35
FXR1-204	ENST00000461044	PLPPR3	Q6T4P5	718 aa		12.67	□□□□□ -0.38
FXR1-204	ENST00000461044	PPP6R1	Q9UPN7	881 aa		12.33	□□□□□ -0.44
FXR1-204	ENST00000461044	ADRA2B	P18089	450 aa		12.27	□□□□□ -0.45
FXR1-204	ENST00000461044	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.02	□□□□□ -0.49
FXR1-204	ENST00000461044	MSH5	O43196	834 aa		11.82	□□□□□ -0.52
FXR1-204	ENST00000461044	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.2	□□□□□ -0.62
FXR1-204	ENST00000461044	PPP4R3CP	Q6ZMV5	832 aa		11.19	□□□□□ -0.62
FXR1-204	ENST00000461044	SCAF1	Q9H7N4	1312 aa	Known RBP	11.09	□□□□□ -0.63
FXR1-204	ENST00000461044	POTED	Q86YR6	584 aa		11.08	□□□□□ -0.64
FXR1-204	ENST00000461044	DMRT2	Q9Y5R5	561 aa		11	□□□□□ -0.65
FXR1-204	ENST00000461044	CNKSR2	Q8WXI2	1034 aa		10.88	□□□□□ -0.67
FXR1-204	ENST00000461044	KCNA4	P22459	653 aa		10.8	□□□□□ -0.68
FXR1-204	ENST00000461044	NCBP3	Q53F19	620 aa	Known RBP	10.77	□□□□□ -0.69
FXR1-204	ENST00000461044	HOXD11	P31277	338 aa	Predicted RBP	10.74	□□□□□ -0.69
FXR1-204	ENST00000461044	NPM3	O75607	178 aa	Known RBP	10.71	□□□□□ -0.69
FXR1-204	ENST00000461044	RNF216	Q9NWF9	866 aa	Predicted RBP	10.71	□□□□□ -0.69
FXR1-204	ENST00000461044	DCAF8L1	A6NGE4	600 aa		10.45	□□□□□ -0.74
FXR1-204	ENST00000461044	DNAJC5B	Q9UF47	199 aa		10.44	□□□□□ -0.74
FXR1-204	ENST00000461044	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.2	□□□□□ -0.78
FXR1-204	ENST00000461044	SLC4A2	P04920	1241 aa		10.19	□□□□□ -0.78
FXR1-204	ENST00000461044	RNF39	Q9H2S5	420 aa		10.19	□□□□□ -0.78
FXR1-204	ENST00000461044	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.15	□□□□□ -0.78	6e-6	■□□□□ 8.3
FXR1-204	ENST00000461044		U3KPZ7	1027 aa	Predicted RBP	10.05	□□□□□ -0.8
FXR1-204	ENST00000461044	C1QBP	Q07021	282 aa	Known RBP	10	□□□□□ -0.81
FXR1-204	ENST00000461044	ZBTB22	O15209	634 aa		9.99	□□□□□ -0.81
FXR1-204	ENST00000461044	CACNB1	Q02641	598 aa	Predicted RBP	9.96	□□□□□ -0.82
FXR1-204	ENST00000461044	FOXD4L1	Q9NU39	408 aa		9.92	□□□□□ -0.82
FXR1-204	ENST00000461044	MYCN	P04198	464 aa	Predicted RBP	9.84	□□□□□ -0.83
FXR1-204	ENST00000461044	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.82	□□□□□ -0.84
FXR1-204	ENST00000461044	CSRNP3	Q8WYN3	585 aa		9.79	□□□□□ -0.84
FXR1-204	ENST00000461044	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.76	□□□□□ -0.85
FXR1-204	ENST00000461044	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.76	□□□□□ -0.85
FXR1-204	ENST00000461044	EHMT2	Q96KQ7	1210 aa		9.75	□□□□□ -0.85
FXR1-204	ENST00000461044	SAMD1	Q6SPF0	538 aa	Predicted RBP	9.74	□□□□□ -0.85
FXR1-204	ENST00000461044	CAPN15	O75808	1086 aa		9.71	□□□□□ -0.86
FXR1-204	ENST00000461044	ATF5	Q9Y2D1	282 aa	Predicted RBP	9.7	□□□□□ -0.86
FXR1-204	ENST00000461044	DSG3	P32926	999 aa		9.65	□□□□□ -0.86
FXR1-204	ENST00000461044	TRH	P20396	242 aa	Predicted RBP	9.64	□□□□□ -0.87
FXR1-204	ENST00000461044	APLP2	Q06481	763 aa		9.64	□□□□□ -0.87
FXR1-204	ENST00000461044	ZNF219	Q9P2Y4	722 aa	Predicted RBP	9.6	□□□□□ -0.87
FXR1-204	ENST00000461044	ATXN8OS	P0DMR3	200 aa		9.58	□□□□□ -0.88
FXR1-204	ENST00000461044	ABCB7	O75027	752 aa		9.55	□□□□□ -0.88
FXR1-204	ENST00000461044	POLA2	Q14181	598 aa		9.48	□□□□□ -0.89
FXR1-204	ENST00000461044	MKRN4P	Q13434	485 aa	Predicted RBP	9.26	□□□□□ -0.93
FXR1-204	ENST00000461044	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.23	□□□□□ -0.93
FXR1-204	ENST00000461044	FBLN2	P98095	1184 aa		9.15	□□□□□ -0.94
FXR1-204	ENST00000461044	OSCAR	Q8IYS5	282 aa		9.15	□□□□□ -0.94
FXR1-204	ENST00000461044	RBM42	Q9BTD8	480 aa	Known RBP	9.08	□□□□□ -0.96
FXR1-204	ENST00000461044	SPDYE2B	A6NHP3	402 aa		9.02	□□□□□ -0.97
FXR1-204	ENST00000461044	SPDYE6	P0CI01	402 aa		9.02	□□□□□ -0.97
FXR1-204	ENST00000461044	SPDYE2	Q495Y8	402 aa		9.02	□□□□□ -0.97
FXR1-204	ENST00000461044	AKT1S1	Q96B36	256 aa		9	□□□□□ -0.97
FXR1-204	ENST00000461044	SSUH2	Q9Y2M2	353 aa		8.99	□□□□□ -0.97
FXR1-204	ENST00000461044	ZNF692	Q9BU19	519 aa	Predicted RBP	8.96	□□□□□ -0.98
FXR1-204	ENST00000461044	REM2	Q8IYK8	340 aa	Predicted RBP	8.95	□□□□□ -0.98
FXR1-204	ENST00000461044	SPDYE4	A6NLX3	237 aa		8.9	□□□□□ -0.98
FXR1-204	ENST00000461044	PABPN1	Q86U42	306 aa	Known RBP eCLIP	8.86	□□□□□ -0.99
FXR1-204	ENST00000461044	PITPNM1	O00562	1244 aa		8.85	□□□□□ -0.99
FXR1-204	ENST00000461044	CHRDL2	Q6WN34	429 aa		8.83	□□□□□ -1
FXR1-204	ENST00000461044	PROM2	Q8N271	834 aa		8.81	□□□□□ -1
FXR1-204	ENST00000461044	FKBP8	Q14318	412 aa		8.78	□□□□□ -1
FXR1-204	ENST00000461044	SPDYE1	Q8NFV5	336 aa	Predicted RBP	8.77	□□□□□ -1.01
FXR1-204	ENST00000461044	CLEC11A	Q9Y240	323 aa		8.74	□□□□□ -1.01
FXR1-204	ENST00000461044	FXR2	P51116	673 aa	Known RBP eCLIP	8.73	□□□□□ -1.01
FXR1-204	ENST00000461044	PIP4P2	Q8N4L2	257 aa		8.73	□□□□□ -1.01
FXR1-204	ENST00000461044	POTEH	Q6S545	545 aa		8.72	□□□□□ -1.01
FXR1-204	ENST00000461044	PRR29	P0C7W0	189 aa		8.64	□□□□□ -1.03
FXR1-204	ENST00000461044	STAG3	Q9UJ98	1225 aa		8.63	□□□□□ -1.03
FXR1-204	ENST00000461044	PRKAR2A	P13861	404 aa	Known RBP	8.6	□□□□□ -1.03
FXR1-204	ENST00000461044	CHADL	Q6NUI6	762 aa		8.6	□□□□□ -1.03
FXR1-204	ENST00000461044	CREBZF	Q9NS37	354 aa		8.58	□□□□□ -1.04
FXR1-204	ENST00000461044	MNX1	P50219	401 aa	Predicted RBP	8.51	□□□□□ -1.05
FXR1-204	ENST00000461044	FARP1	Q9Y4F1	1045 aa	Predicted RBP	8.49	□□□□□ -1.05
FXR1-204	ENST00000461044	EVX2	Q03828	476 aa		8.47	□□□□□ -1.05
FXR1-204	ENST00000461044	C19orf67	A6NJJ6	358 aa		8.44	□□□□□ -1.06
FXR1-204	ENST00000461044	MIER1	Q8N108	512 aa		8.44	□□□□□ -1.06
FXR1-204	ENST00000461044	FBXO3	Q9UK99	471 aa		8.44	□□□□□ -1.06
FXR1-204	ENST00000461044	HAX1	O00165	279 aa		8.42	□□□□□ -1.06
FXR1-204	ENST00000461044	VASP	P50552	380 aa	Predicted RBP	8.39	□□□□□ -1.07
FXR1-204	ENST00000461044	PLCD3	Q8N3E9	789 aa		8.38	□□□□□ -1.07
FXR1-204	ENST00000461044	NPM1	P06748	294 aa	Known RBP eCLIP	8.33	□□□□□ -1.08
FXR1-204	ENST00000461044	CD44	P16070	742 aa	Known RBP	8.33	□□□□□ -1.08
FXR1-204	ENST00000461044	IFNLR1	Q8IU57	520 aa	Predicted RBP	8.33	□□□□□ -1.08
FXR1-204	ENST00000461044	NUBP1	P53384	320 aa		8.31	□□□□□ -1.08
FXR1-204	ENST00000461044	SP7	Q8TDD2	431 aa	Predicted RBP	8.31	□□□□□ -1.08
FXR1-204	ENST00000461044	PLEKHG5	O94827	1062 aa		8.3	□□□□□ -1.08
FXR1-204	ENST00000461044	RASEF	Q8IZ41	740 aa		8.29	□□□□□ -1.08
FXR1-204	ENST00000461044	ZRANB1	Q9UGI0	708 aa		8.27	□□□□□ -1.09
FXR1-204	ENST00000461044	ZBTB47	Q9UFB7	747 aa	Predicted RBP	8.25	□□□□□ -1.09
FXR1-204	ENST00000461044	ZNF579	Q8NAF0	562 aa	Known RBP	8.24	□□□□□ -1.09
FXR1-204	ENST00000461044	GABBR2	O75899	941 aa		8.23	□□□□□ -1.09
FXR1-204	ENST00000461044	KLHL34	Q8N239	644 aa		8.23	□□□□□ -1.09
FXR1-204	ENST00000461044	TSPYL2	Q9H2G4	693 aa	Predicted RBP	8.23	□□□□□ -1.09
FXR1-204	ENST00000461044	CCDC61	Q9Y6R9	512 aa		8.22	□□□□□ -1.09
FXR1-204	ENST00000461044	PHF12	Q96QT6	1004 aa		8.21	□□□□□ -1.1

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