RNA–Protein interactions for RNA: ENST00000461012.1

IFT52-204, Transcript of intraflagellar transport 52, humanhuman

TSL 2

Gene IFT52, Length 399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52-204ENST00000461012 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
IFT52-204ENST00000461012 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.51
IFT52-204ENST00000461012 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
IFT52-204ENST00000461012 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
IFT52-204ENST00000461012 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
IFT52-204ENST00000461012 FOXD1Q16676 465 aa24.69■■□□□ 1.54
IFT52-204ENST00000461012 ADRA2BP18089 450 aa23.89■■□□□ 1.41
IFT52-204ENST00000461012 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
IFT52-204ENST00000461012 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
IFT52-204ENST00000461012 MSH5O43196 834 aa22.69■■□□□ 1.22
IFT52-204ENST00000461012 PPP4R3CPQ6ZMV5 832 aa22.1■■□□□ 1.13
IFT52-204ENST00000461012 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.07
IFT52-204ENST00000461012 KCNA4P22459 653 aa21.76■■□□□ 1.07
IFT52-204ENST00000461012 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
IFT52-204ENST00000461012 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
IFT52-204ENST00000461012 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
IFT52-204ENST00000461012 NPM3O75607 178 aaKnown RBP21.25■□□□□ 0.99
IFT52-204ENST00000461012 DMRT2Q9Y5R5 561 aa21.24■□□□□ 0.99
IFT52-204ENST00000461012 RNF216Q9NWF9 866 aaPredicted RBP20.96■□□□□ 0.95
IFT52-204ENST00000461012 HOXD11P31277 338 aaPredicted RBP20.82■□□□□ 0.92
IFT52-204ENST00000461012 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
IFT52-204ENST00000461012 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
IFT52-204ENST00000461012 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
IFT52-204ENST00000461012 DNAJC5BQ9UF47 199 aa20.43■□□□□ 0.86
IFT52-204ENST00000461012 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
IFT52-204ENST00000461012 ZBTB22O15209 634 aa20.02■□□□□ 0.8
IFT52-204ENST00000461012 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
IFT52-204ENST00000461012 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
IFT52-204ENST00000461012 FOXD4L1Q9NU39 408 aa19.96■□□□□ 0.79
IFT52-204ENST00000461012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.78
IFT52-204ENST00000461012 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
IFT52-204ENST00000461012 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
IFT52-204ENST00000461012 RNF39Q9H2S5 420 aa19.46■□□□□ 0.71
IFT52-204ENST00000461012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
IFT52-204ENST00000461012 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
IFT52-204ENST00000461012 SAMD1Q6SPF0 538 aaPredicted RBP19.3■□□□□ 0.68
IFT52-204ENST00000461012 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
IFT52-204ENST00000461012 ATXN8OSP0DMR3 200 aa19.17■□□□□ 0.66
IFT52-204ENST00000461012 APLP2Q06481 763 aa19.12■□□□□ 0.65
IFT52-204ENST00000461012 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
IFT52-204ENST00000461012 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
IFT52-204ENST00000461012 CAPN15O75808 1086 aa18.99■□□□□ 0.63
IFT52-204ENST00000461012 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
IFT52-204ENST00000461012 CACNB1Q02641 598 aaPredicted RBP18.93■□□□□ 0.62
IFT52-204ENST00000461012 ZNF219Q9P2Y4 722 aaPredicted RBP18.87■□□□□ 0.61
IFT52-204ENST00000461012 ABCB7O75027 752 aa18.68■□□□□ 0.58
IFT52-204ENST00000461012 POLA2Q14181 598 aa18.6■□□□□ 0.57
IFT52-204ENST00000461012 DSG3P32926 999 aa18.58■□□□□ 0.56
IFT52-204ENST00000461012 FBLN2P98095 1184 aa18.29■□□□□ 0.52
IFT52-204ENST00000461012 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
IFT52-204ENST00000461012 ZBTB12Q9Y330 459 aaPredicted RBP18.27■□□□□ 0.52
IFT52-204ENST00000461012 FKBP8Q14318 412 aa18.12■□□□□ 0.49
IFT52-204ENST00000461012 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
IFT52-204ENST00000461012 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
IFT52-204ENST00000461012 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
IFT52-204ENST00000461012 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
IFT52-204ENST00000461012 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
IFT52-204ENST00000461012 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
IFT52-204ENST00000461012 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
IFT52-204ENST00000461012 SSUH2Q9Y2M2 353 aa17.66■□□□□ 0.42
IFT52-204ENST00000461012 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
IFT52-204ENST00000461012 PROM2Q8N271 834 aa17.57■□□□□ 0.4
IFT52-204ENST00000461012 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
IFT52-204ENST00000461012 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
IFT52-204ENST00000461012 FBXO3Q9UK99 471 aa17.35■□□□□ 0.37
IFT52-204ENST00000461012 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
IFT52-204ENST00000461012 SPDYE1Q8NFV5 336 aaPredicted RBP17.25■□□□□ 0.35
IFT52-204ENST00000461012 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
IFT52-204ENST00000461012 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
IFT52-204ENST00000461012 VASPP50552 380 aaPredicted RBP17.16■□□□□ 0.34
IFT52-204ENST00000461012 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
IFT52-204ENST00000461012 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.32
IFT52-204ENST00000461012 MIER1Q8N108 512 aa17■□□□□ 0.31
IFT52-204ENST00000461012 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
IFT52-204ENST00000461012 IFNLR1Q8IU57 520 aaPredicted RBP16.92■□□□□ 0.3
IFT52-204ENST00000461012 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
IFT52-204ENST00000461012 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
IFT52-204ENST00000461012 CREBZFQ9NS37 354 aa16.86■□□□□ 0.29
IFT52-204ENST00000461012 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
IFT52-204ENST00000461012 FXR2P51116 673 aaKnown RBP eCLIP16.77■□□□□ 0.28
IFT52-204ENST00000461012 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
IFT52-204ENST00000461012 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
IFT52-204ENST00000461012 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
IFT52-204ENST00000461012 SPOCK2Q92563 424 aa16.7■□□□□ 0.26
IFT52-204ENST00000461012 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
IFT52-204ENST00000461012 AMER1Q5JTC6 1135 aaPredicted RBP16.67■□□□□ 0.26
IFT52-204ENST00000461012 RTN4Q9NQC3 1192 aaKnown RBP16.67■□□□□ 0.26
IFT52-204ENST00000461012 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
IFT52-204ENST00000461012 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
IFT52-204ENST00000461012 NUBP1P53384 320 aa16.52■□□□□ 0.24
IFT52-204ENST00000461012 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
IFT52-204ENST00000461012 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
IFT52-204ENST00000461012 FAM212AQ96EL1 285 aa16.43■□□□□ 0.22
IFT52-204ENST00000461012 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
IFT52-204ENST00000461012 PKD2Q13563 968 aa16.4■□□□□ 0.22
IFT52-204ENST00000461012 TSPYL2Q9H2G4 693 aaPredicted RBP16.38■□□□□ 0.21
IFT52-204ENST00000461012 GSE1Q14687 1217 aa16.36■□□□□ 0.21
IFT52-204ENST00000461012 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
IFT52-204ENST00000461012 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
IFT52-204ENST00000461012 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms