RNA–Protein interactions for RNA: ENST00000460741.1

HOMER1-203, Transcript of homer scaffold protein 1, humanhuman

TSL 2

Gene HOMER1, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-203ENST00000460741 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
HOMER1-203ENST00000460741 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
HOMER1-203ENST00000460741 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
HOMER1-203ENST00000460741 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
HOMER1-203ENST00000460741 FOXD1Q16676 465 aa22.14■■□□□ 1.13
HOMER1-203ENST00000460741 POTEDQ86YR6 584 aa21.35■■□□□ 1.01
HOMER1-203ENST00000460741 MSH5O43196 834 aa20.96■□□□□ 0.95
HOMER1-203ENST00000460741 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
HOMER1-203ENST00000460741 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
HOMER1-203ENST00000460741 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
HOMER1-203ENST00000460741 ADRA2BP18089 450 aa20.16■□□□□ 0.82
HOMER1-203ENST00000460741 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
HOMER1-203ENST00000460741 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
HOMER1-203ENST00000460741 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
HOMER1-203ENST00000460741 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
HOMER1-203ENST00000460741 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
HOMER1-203ENST00000460741 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
HOMER1-203ENST00000460741 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
HOMER1-203ENST00000460741 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
HOMER1-203ENST00000460741 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
HOMER1-203ENST00000460741 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
HOMER1-203ENST00000460741 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
HOMER1-203ENST00000460741 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
HOMER1-203ENST00000460741 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
HOMER1-203ENST00000460741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
HOMER1-203ENST00000460741 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
HOMER1-203ENST00000460741 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
HOMER1-203ENST00000460741 KCNA4P22459 653 aa16.64■□□□□ 0.25
HOMER1-203ENST00000460741 POTEHQ6S545 545 aa16.63■□□□□ 0.25
HOMER1-203ENST00000460741 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
HOMER1-203ENST00000460741 DSG3P32926 999 aa16.5■□□□□ 0.23
HOMER1-203ENST00000460741 CAPN15O75808 1086 aa16.44■□□□□ 0.22
HOMER1-203ENST00000460741 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
HOMER1-203ENST00000460741 APLP2Q06481 763 aa16.06■□□□□ 0.16
HOMER1-203ENST00000460741 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
HOMER1-203ENST00000460741 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
HOMER1-203ENST00000460741 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
HOMER1-203ENST00000460741 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
HOMER1-203ENST00000460741 ABCB7O75027 752 aa16.01■□□□□ 0.15
HOMER1-203ENST00000460741 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
HOMER1-203ENST00000460741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
HOMER1-203ENST00000460741 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
HOMER1-203ENST00000460741 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
HOMER1-203ENST00000460741 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
HOMER1-203ENST00000460741 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
HOMER1-203ENST00000460741 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
HOMER1-203ENST00000460741 POLA2Q14181 598 aa15.5■□□□□ 0.07
HOMER1-203ENST00000460741 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
HOMER1-203ENST00000460741 ZBTB22O15209 634 aa15.36■□□□□ 0.05
HOMER1-203ENST00000460741 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
HOMER1-203ENST00000460741 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
HOMER1-203ENST00000460741 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
HOMER1-203ENST00000460741 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
HOMER1-203ENST00000460741 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
HOMER1-203ENST00000460741 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
HOMER1-203ENST00000460741 ATXN8OSP0DMR3 200 aa15.03■□□□□ -0
HOMER1-203ENST00000460741 OSCARQ8IYS5 282 aa15.03■□□□□ -0
HOMER1-203ENST00000460741 HAX1O00165 279 aa14.99□□□□□ -0.01
HOMER1-203ENST00000460741 SLC24A1O60721 1099 aa14.99□□□□□ -0.01
HOMER1-203ENST00000460741 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
HOMER1-203ENST00000460741 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
HOMER1-203ENST00000460741 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
HOMER1-203ENST00000460741 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
HOMER1-203ENST00000460741 EVX2Q03828 476 aa14.75□□□□□ -0.05
HOMER1-203ENST00000460741 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
HOMER1-203ENST00000460741 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
HOMER1-203ENST00000460741 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
HOMER1-203ENST00000460741 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
HOMER1-203ENST00000460741 FBLN2P98095 1184 aa14.56□□□□□ -0.08
HOMER1-203ENST00000460741 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
HOMER1-203ENST00000460741 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
HOMER1-203ENST00000460741 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
HOMER1-203ENST00000460741 FKBP8Q14318 412 aa14.45□□□□□ -0.1
HOMER1-203ENST00000460741 GABBR2O75899 941 aa14.42□□□□□ -0.1
HOMER1-203ENST00000460741 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
HOMER1-203ENST00000460741 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
HOMER1-203ENST00000460741 LHX8Q68G74 356 aa14.37□□□□□ -0.11
HOMER1-203ENST00000460741 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
HOMER1-203ENST00000460741 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
HOMER1-203ENST00000460741 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
HOMER1-203ENST00000460741 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
HOMER1-203ENST00000460741 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
HOMER1-203ENST00000460741 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
HOMER1-203ENST00000460741 CLCN6P51797 869 aa14.05□□□□□ -0.16
HOMER1-203ENST00000460741 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
HOMER1-203ENST00000460741 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
HOMER1-203ENST00000460741 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
HOMER1-203ENST00000460741 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
HOMER1-203ENST00000460741 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
HOMER1-203ENST00000460741 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
HOMER1-203ENST00000460741 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
HOMER1-203ENST00000460741 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
HOMER1-203ENST00000460741 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
HOMER1-203ENST00000460741 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
HOMER1-203ENST00000460741 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
HOMER1-203ENST00000460741 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
HOMER1-203ENST00000460741 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
HOMER1-203ENST00000460741 PROM2Q8N271 834 aa13.59□□□□□ -0.23
HOMER1-203ENST00000460741 POTEMA6NI47 508 aa13.56□□□□□ -0.24
HOMER1-203ENST00000460741 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms