RNA–Protein interactions for RNA: ENST00000460641.1

ITGAV-205, Transcript of integrin subunit alpha V, humanhuman

TSL 5

Gene ITGAV, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-205ENST00000460641 AEBP2Q6ZN18 517 aaPredicted RBP31.45■■■□□ 2.63
ITGAV-205ENST00000460641 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
ITGAV-205ENST00000460641 PHF23Q9BUL5 403 aaPredicted RBP26.94■■□□□ 1.9
ITGAV-205ENST00000460641 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
ITGAV-205ENST00000460641 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
ITGAV-205ENST00000460641 FOXD1Q16676 465 aa24.8■■□□□ 1.56
ITGAV-205ENST00000460641 PPP6R1Q9UPN7 881 aa23.81■■□□□ 1.4
ITGAV-205ENST00000460641 ADRA2BP18089 450 aa23.78■■□□□ 1.4
ITGAV-205ENST00000460641 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
ITGAV-205ENST00000460641 MSH5O43196 834 aa22.92■■□□□ 1.26
ITGAV-205ENST00000460641 PPP4R3CPQ6ZMV5 832 aa21.89■■□□□ 1.09
ITGAV-205ENST00000460641 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
ITGAV-205ENST00000460641 MAPK8IP2Q13387 824 aaPredicted RBP21.61■■□□□ 1.05
ITGAV-205ENST00000460641 NCBP3Q53F19 620 aaKnown RBP21.31■■□□□ 1
ITGAV-205ENST00000460641 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
ITGAV-205ENST00000460641 CNKSR2Q8WXI2 1034 aa21.3■■□□□ 1
ITGAV-205ENST00000460641 KCNA4P22459 653 aa21.27■■□□□ 1
ITGAV-205ENST00000460641 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
ITGAV-205ENST00000460641 NPM3O75607 178 aaKnown RBP20.97■□□□□ 0.95
ITGAV-205ENST00000460641 RNF216Q9NWF9 866 aaPredicted RBP20.9■□□□□ 0.94
ITGAV-205ENST00000460641 HOXD11P31277 338 aaPredicted RBP20.84■□□□□ 0.93
ITGAV-205ENST00000460641 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
ITGAV-205ENST00000460641 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
ITGAV-205ENST00000460641 SLC4A1APQ9BWU0 796 aaKnown RBP20.24■□□□□ 0.83
ITGAV-205ENST00000460641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
ITGAV-205ENST00000460641 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
ITGAV-205ENST00000460641 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
ITGAV-205ENST00000460641 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
ITGAV-205ENST00000460641 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
ITGAV-205ENST00000460641 ZBTB22O15209 634 aa19.55■□□□□ 0.72
ITGAV-205ENST00000460641 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
ITGAV-205ENST00000460641 C1QBPQ07021 282 aaKnown RBP19.4■□□□□ 0.7
ITGAV-205ENST00000460641 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
ITGAV-205ENST00000460641 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
ITGAV-205ENST00000460641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
ITGAV-205ENST00000460641 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
ITGAV-205ENST00000460641 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
ITGAV-205ENST00000460641 SAMD1Q6SPF0 538 aaPredicted RBP19.19■□□□□ 0.66
ITGAV-205ENST00000460641 APLP2Q06481 763 aa19.09■□□□□ 0.65
ITGAV-205ENST00000460641 SPINK5Q9NQ38 1064 aaPredicted RBP19.01■□□□□ 0.63
ITGAV-205ENST00000460641 CAPN15O75808 1086 aa18.95■□□□□ 0.62
ITGAV-205ENST00000460641 ATXN8OSP0DMR3 200 aa18.94■□□□□ 0.62
ITGAV-205ENST00000460641 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
ITGAV-205ENST00000460641 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
ITGAV-205ENST00000460641 ZNF219Q9P2Y4 722 aaPredicted RBP18.82■□□□□ 0.6
ITGAV-205ENST00000460641 DSG3P32926 999 aa18.64■□□□□ 0.57
ITGAV-205ENST00000460641 ABCB7O75027 752 aa18.56■□□□□ 0.56
ITGAV-205ENST00000460641 POLA2Q14181 598 aa18.52■□□□□ 0.56
ITGAV-205ENST00000460641 ZBTB12Q9Y330 459 aaPredicted RBP18.19■□□□□ 0.5
ITGAV-205ENST00000460641 FBLN2P98095 1184 aa18.1■□□□□ 0.49
ITGAV-205ENST00000460641 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
ITGAV-205ENST00000460641 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
ITGAV-205ENST00000460641 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
ITGAV-205ENST00000460641 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
ITGAV-205ENST00000460641 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
ITGAV-205ENST00000460641 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
ITGAV-205ENST00000460641 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
ITGAV-205ENST00000460641 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
ITGAV-205ENST00000460641 FKBP8Q14318 412 aa17.54■□□□□ 0.4
ITGAV-205ENST00000460641 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
ITGAV-205ENST00000460641 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
ITGAV-205ENST00000460641 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
ITGAV-205ENST00000460641 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
ITGAV-205ENST00000460641 PROM2Q8N271 834 aa17.28■□□□□ 0.36
ITGAV-205ENST00000460641 SPDYE1Q8NFV5 336 aaPredicted RBP17.2■□□□□ 0.34
ITGAV-205ENST00000460641 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
ITGAV-205ENST00000460641 CLEC11AQ9Y240 323 aa17.14■□□□□ 0.33
ITGAV-205ENST00000460641 STAG3Q9UJ98 1225 aa17.1■□□□□ 0.33
ITGAV-205ENST00000460641 CHRDL2Q6WN34 429 aa17.06■□□□□ 0.32
ITGAV-205ENST00000460641 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
ITGAV-205ENST00000460641 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
ITGAV-205ENST00000460641 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
ITGAV-205ENST00000460641 PIP4P2Q8N4L2 257 aa16.82■□□□□ 0.28
ITGAV-205ENST00000460641 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
ITGAV-205ENST00000460641 MIER1Q8N108 512 aa16.74■□□□□ 0.27
ITGAV-205ENST00000460641 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
ITGAV-205ENST00000460641 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
ITGAV-205ENST00000460641 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
ITGAV-205ENST00000460641 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
ITGAV-205ENST00000460641 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
ITGAV-205ENST00000460641 POTEHQ6S545 545 aa16.63■□□□□ 0.25
ITGAV-205ENST00000460641 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
ITGAV-205ENST00000460641 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
ITGAV-205ENST00000460641 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
ITGAV-205ENST00000460641 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
ITGAV-205ENST00000460641 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
ITGAV-205ENST00000460641 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
ITGAV-205ENST00000460641 HAX1O00165 279 aa16.34■□□□□ 0.21
ITGAV-205ENST00000460641 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
ITGAV-205ENST00000460641 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
ITGAV-205ENST00000460641 NUBP1P53384 320 aa16.29■□□□□ 0.2
ITGAV-205ENST00000460641 CD44P16070 742 aaKnown RBP16.25■□□□□ 0.19
ITGAV-205ENST00000460641 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
ITGAV-205ENST00000460641 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
ITGAV-205ENST00000460641 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
ITGAV-205ENST00000460641 EVX2Q03828 476 aa16.17■□□□□ 0.18
ITGAV-205ENST00000460641 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
ITGAV-205ENST00000460641 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
ITGAV-205ENST00000460641 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
ITGAV-205ENST00000460641 GSE1Q14687 1217 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms