RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 AEBP2Q6ZN18 517 aaPredicted RBP23.93■■□□□ 1.42
TTC3-211ENST00000460328 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
TTC3-211ENST00000460328 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
TTC3-211ENST00000460328 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
TTC3-211ENST00000460328 FOXD1Q16676 465 aa19.07■□□□□ 0.64
TTC3-211ENST00000460328 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
TTC3-211ENST00000460328 MSH5O43196 834 aa17.94■□□□□ 0.46
TTC3-211ENST00000460328 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
TTC3-211ENST00000460328 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
TTC3-211ENST00000460328 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
TTC3-211ENST00000460328 ADRA2BP18089 450 aa17.63■□□□□ 0.41
TTC3-211ENST00000460328 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
TTC3-211ENST00000460328 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
TTC3-211ENST00000460328 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
TTC3-211ENST00000460328 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
TTC3-211ENST00000460328 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
TTC3-211ENST00000460328 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
TTC3-211ENST00000460328 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
TTC3-211ENST00000460328 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
TTC3-211ENST00000460328 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
TTC3-211ENST00000460328 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
TTC3-211ENST00000460328 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
TTC3-211ENST00000460328 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
TTC3-211ENST00000460328 KCNA4P22459 653 aa15.26■□□□□ 0.03
TTC3-211ENST00000460328 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
TTC3-211ENST00000460328 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
TTC3-211ENST00000460328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
TTC3-211ENST00000460328 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
TTC3-211ENST00000460328 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
TTC3-211ENST00000460328 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
TTC3-211ENST00000460328 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
TTC3-211ENST00000460328 CAPN15O75808 1086 aa14.27□□□□□ -0.13
TTC3-211ENST00000460328 DSG3P32926 999 aa14.25□□□□□ -0.13
TTC3-211ENST00000460328 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
TTC3-211ENST00000460328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
TTC3-211ENST00000460328 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
TTC3-211ENST00000460328 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
TTC3-211ENST00000460328 APLP2Q06481 763 aa14.1□□□□□ -0.15
TTC3-211ENST00000460328 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
TTC3-211ENST00000460328 ZBTB22O15209 634 aa14.03□□□□□ -0.16
TTC3-211ENST00000460328 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
TTC3-211ENST00000460328 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
TTC3-211ENST00000460328 ABCB7O75027 752 aa13.92□□□□□ -0.18
TTC3-211ENST00000460328 POTEHQ6S545 545 aa13.86□□□□□ -0.19
TTC3-211ENST00000460328 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
TTC3-211ENST00000460328 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
TTC3-211ENST00000460328 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
TTC3-211ENST00000460328 POLA2Q14181 598 aa13.65□□□□□ -0.22
TTC3-211ENST00000460328 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
TTC3-211ENST00000460328 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
TTC3-211ENST00000460328 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
TTC3-211ENST00000460328 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
TTC3-211ENST00000460328 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
TTC3-211ENST00000460328 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
TTC3-211ENST00000460328 FBLN2P98095 1184 aa13.19□□□□□ -0.3
TTC3-211ENST00000460328 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
TTC3-211ENST00000460328 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
TTC3-211ENST00000460328 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
TTC3-211ENST00000460328 PITPNM1O00562 1244 aa13□□□□□ -0.33
TTC3-211ENST00000460328 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
TTC3-211ENST00000460328 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
TTC3-211ENST00000460328 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
TTC3-211ENST00000460328 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
TTC3-211ENST00000460328 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
TTC3-211ENST00000460328 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
TTC3-211ENST00000460328 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
TTC3-211ENST00000460328 HAX1O00165 279 aa12.79□□□□□ -0.36
TTC3-211ENST00000460328 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
TTC3-211ENST00000460328 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
TTC3-211ENST00000460328 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
TTC3-211ENST00000460328 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
TTC3-211ENST00000460328 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
TTC3-211ENST00000460328 EVX2Q03828 476 aa12.61□□□□□ -0.39
TTC3-211ENST00000460328 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
TTC3-211ENST00000460328 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
TTC3-211ENST00000460328 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
TTC3-211ENST00000460328 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
TTC3-211ENST00000460328 PROM2Q8N271 834 aa12.4□□□□□ -0.42
TTC3-211ENST00000460328 FKBP8Q14318 412 aa12.39□□□□□ -0.43
TTC3-211ENST00000460328 GABBR2O75899 941 aa12.34□□□□□ -0.43
TTC3-211ENST00000460328 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
TTC3-211ENST00000460328 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
TTC3-211ENST00000460328 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
TTC3-211ENST00000460328 CLCN6P51797 869 aa12.17□□□□□ -0.46
TTC3-211ENST00000460328 LHX8Q68G74 356 aa12.11□□□□□ -0.47
TTC3-211ENST00000460328 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
TTC3-211ENST00000460328 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
TTC3-211ENST00000460328 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
TTC3-211ENST00000460328 MIER1Q8N108 512 aa12.06□□□□□ -0.48
TTC3-211ENST00000460328 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
TTC3-211ENST00000460328 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
TTC3-211ENST00000460328 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
TTC3-211ENST00000460328 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
TTC3-211ENST00000460328 FBXO3Q9UK99 471 aa12□□□□□ -0.49
TTC3-211ENST00000460328 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
TTC3-211ENST00000460328 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
TTC3-211ENST00000460328 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
TTC3-211ENST00000460328 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
TTC3-211ENST00000460328 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
TTC3-211ENST00000460328 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms