RNA–Protein interactions for RNA: ENST00000459689.1

SUPT3H-204, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 396 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-204ENST00000459689 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
SUPT3H-204ENST00000459689 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
SUPT3H-204ENST00000459689 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
SUPT3H-204ENST00000459689 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
SUPT3H-204ENST00000459689 FOXD1Q16676 465 aa22.6■■□□□ 1.21
SUPT3H-204ENST00000459689 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
SUPT3H-204ENST00000459689 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
SUPT3H-204ENST00000459689 ADRA2BP18089 450 aa21.49■■□□□ 1.03
SUPT3H-204ENST00000459689 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
SUPT3H-204ENST00000459689 MSH5O43196 834 aa20.85■□□□□ 0.93
SUPT3H-204ENST00000459689 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
SUPT3H-204ENST00000459689 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
SUPT3H-204ENST00000459689 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
SUPT3H-204ENST00000459689 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
SUPT3H-204ENST00000459689 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
SUPT3H-204ENST00000459689 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
SUPT3H-204ENST00000459689 KCNA4P22459 653 aa18.95■□□□□ 0.62
SUPT3H-204ENST00000459689 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
SUPT3H-204ENST00000459689 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
SUPT3H-204ENST00000459689 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
SUPT3H-204ENST00000459689 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
SUPT3H-204ENST00000459689 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
SUPT3H-204ENST00000459689 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
SUPT3H-204ENST00000459689 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
SUPT3H-204ENST00000459689 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
SUPT3H-204ENST00000459689 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
SUPT3H-204ENST00000459689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
SUPT3H-204ENST00000459689 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
SUPT3H-204ENST00000459689 C1QBPQ07021 282 aaKnown RBP17.62■□□□□ 0.41
SUPT3H-204ENST00000459689 ZBTB22O15209 634 aa17.52■□□□□ 0.4
SUPT3H-204ENST00000459689 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
SUPT3H-204ENST00000459689 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
SUPT3H-204ENST00000459689 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
SUPT3H-204ENST00000459689 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
SUPT3H-204ENST00000459689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
SUPT3H-204ENST00000459689 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
SUPT3H-204ENST00000459689 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
SUPT3H-204ENST00000459689 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
SUPT3H-204ENST00000459689 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
SUPT3H-204ENST00000459689 CAPN15O75808 1086 aa17.07■□□□□ 0.32
SUPT3H-204ENST00000459689 APLP2Q06481 763 aa17.04■□□□□ 0.32
SUPT3H-204ENST00000459689 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
SUPT3H-204ENST00000459689 DSG3P32926 999 aa16.96■□□□□ 0.31
SUPT3H-204ENST00000459689 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
SUPT3H-204ENST00000459689 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
SUPT3H-204ENST00000459689 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
SUPT3H-204ENST00000459689 ABCB7O75027 752 aa16.78■□□□□ 0.28
SUPT3H-204ENST00000459689 POLA2Q14181 598 aa16.65■□□□□ 0.26
SUPT3H-204ENST00000459689 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
SUPT3H-204ENST00000459689 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
SUPT3H-204ENST00000459689 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
SUPT3H-204ENST00000459689 FBLN2P98095 1184 aa16.11■□□□□ 0.17
SUPT3H-204ENST00000459689 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
SUPT3H-204ENST00000459689 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
SUPT3H-204ENST00000459689 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
SUPT3H-204ENST00000459689 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
SUPT3H-204ENST00000459689 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
SUPT3H-204ENST00000459689 SSUH2Q9Y2M2 353 aa15.82■□□□□ 0.12
SUPT3H-204ENST00000459689 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
SUPT3H-204ENST00000459689 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
SUPT3H-204ENST00000459689 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
SUPT3H-204ENST00000459689 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
SUPT3H-204ENST00000459689 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
SUPT3H-204ENST00000459689 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
SUPT3H-204ENST00000459689 PROM2Q8N271 834 aa15.5■□□□□ 0.07
SUPT3H-204ENST00000459689 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
SUPT3H-204ENST00000459689 FKBP8Q14318 412 aa15.42■□□□□ 0.06
SUPT3H-204ENST00000459689 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
SUPT3H-204ENST00000459689 POTEHQ6S545 545 aa15.35■□□□□ 0.05
SUPT3H-204ENST00000459689 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
SUPT3H-204ENST00000459689 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
SUPT3H-204ENST00000459689 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
SUPT3H-204ENST00000459689 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
SUPT3H-204ENST00000459689 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
SUPT3H-204ENST00000459689 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
SUPT3H-204ENST00000459689 CREBZFQ9NS37 354 aa15.06■□□□□ 0
SUPT3H-204ENST00000459689 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
SUPT3H-204ENST00000459689 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
SUPT3H-204ENST00000459689 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
SUPT3H-204ENST00000459689 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
SUPT3H-204ENST00000459689 EVX2Q03828 476 aa14.82□□□□□ -0.04
SUPT3H-204ENST00000459689 MIER1Q8N108 512 aa14.79□□□□□ -0.04
SUPT3H-204ENST00000459689 HAX1O00165 279 aa14.78□□□□□ -0.04
SUPT3H-204ENST00000459689 VASPP50552 380 aaPredicted RBP14.77□□□□□ -0.05
SUPT3H-204ENST00000459689 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
SUPT3H-204ENST00000459689 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
SUPT3H-204ENST00000459689 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
SUPT3H-204ENST00000459689 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
SUPT3H-204ENST00000459689 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
SUPT3H-204ENST00000459689 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
SUPT3H-204ENST00000459689 NUBP1P53384 320 aa14.58□□□□□ -0.08
SUPT3H-204ENST00000459689 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
SUPT3H-204ENST00000459689 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
SUPT3H-204ENST00000459689 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
SUPT3H-204ENST00000459689 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
SUPT3H-204ENST00000459689 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
SUPT3H-204ENST00000459689 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
SUPT3H-204ENST00000459689 GABBR2O75899 941 aa14.44□□□□□ -0.1
SUPT3H-204ENST00000459689 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
SUPT3H-204ENST00000459689 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms