RNA–Protein interactions for RNA: ENST00000459541.1

RNU6-221P-201, Transcript of RNA, U6 small nuclear 221, pseudogene, humanhuman

BASIC

Gene RNU6-221P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-221P-201ENST00000459541 AEBP2Q6ZN18 517 aaPredicted RBP10.72□□□□□ -0.69
RNU6-221P-201ENST00000459541 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
RNU6-221P-201ENST00000459541 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
RNU6-221P-201ENST00000459541 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
RNU6-221P-201ENST00000459541 PLPPR3Q6T4P5 718 aa8.51□□□□□ -1.05
RNU6-221P-201ENST00000459541 FOXD1Q16676 465 aa8.43□□□□□ -1.06
RNU6-221P-201ENST00000459541 ADRA2BP18089 450 aa8.16□□□□□ -1.1
RNU6-221P-201ENST00000459541 PPP6R1Q9UPN7 881 aa8.16□□□□□ -1.1
RNU6-221P-201ENST00000459541 PIAS4Q8N2W9 510 aaPredicted RBP7.96□□□□□ -1.14
RNU6-221P-201ENST00000459541 MSH5O43196 834 aa7.71□□□□□ -1.18
RNU6-221P-201ENST00000459541 PPP4R3CPQ6ZMV5 832 aa7.53□□□□□ -1.2
RNU6-221P-201ENST00000459541 KCNA4P22459 653 aa7.42□□□□□ -1.22
RNU6-221P-201ENST00000459541 MAPK8IP2Q13387 824 aaPredicted RBP7.41□□□□□ -1.22
RNU6-221P-201ENST00000459541 SCAF1Q9H7N4 1312 aaKnown RBP7.4□□□□□ -1.22
RNU6-221P-201ENST00000459541 NCBP3Q53F19 620 aaKnown RBP7.31□□□□□ -1.24
RNU6-221P-201ENST00000459541 CNKSR2Q8WXI2 1034 aa7.28□□□□□ -1.24
RNU6-221P-201ENST00000459541 NPM3O75607 178 aaKnown RBP7.25□□□□□ -1.25
RNU6-221P-201ENST00000459541 DMRT2Q9Y5R5 561 aa7.22□□□□□ -1.25
RNU6-221P-201ENST00000459541 POTEDQ86YR6 584 aa7.2□□□□□ -1.26
RNU6-221P-201ENST00000459541 RNF216Q9NWF9 866 aaPredicted RBP7.12□□□□□ -1.27
RNU6-221P-201ENST00000459541 HOXD11P31277 338 aaPredicted RBP7.09□□□□□ -1.27
RNU6-221P-201ENST00000459541 SLC4A1APQ9BWU0 796 aaKnown RBP7.06□□□□□ -1.28
RNU6-221P-201ENST00000459541 DCAF8L1A6NGE4 600 aa6.98□□□□□ -1.29
RNU6-221P-201ENST00000459541 EHMT2Q96KQ7 1210 aa6.96□□□□□ -1.3
RNU6-221P-201ENST00000459541 DNAJC5BQ9UF47 199 aa6.93□□□□□ -1.3
RNU6-221P-201ENST00000459541 ZBTB22O15209 634 aa6.85□□□□□ -1.31
RNU6-221P-201ENST00000459541 SLC4A2P04920 1241 aa6.83□□□□□ -1.32
RNU6-221P-201ENST00000459541 CSRNP3Q8WYN3 585 aa6.82□□□□□ -1.32
RNU6-221P-201ENST00000459541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.79□□□□□ -1.32
RNU6-221P-201ENST00000459541 FOXD4L1Q9NU39 408 aa6.79□□□□□ -1.32
RNU6-221P-201ENST00000459541 U3KPZ7 1027 aaPredicted RBP6.68□□□□□ -1.34
RNU6-221P-201ENST00000459541 MYCNP04198 464 aaPredicted RBP6.66□□□□□ -1.34
RNU6-221P-201ENST00000459541 RNF39Q9H2S5 420 aa6.62□□□□□ -1.35
RNU6-221P-201ENST00000459541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.55□□□□□ -1.36
RNU6-221P-201ENST00000459541 HNRNPUL2Q1KMD3 747 aaKnown RBP6.55□□□□□ -1.36
RNU6-221P-201ENST00000459541 SAMD1Q6SPF0 538 aaPredicted RBP6.55□□□□□ -1.36
RNU6-221P-201ENST00000459541 ATF5Q9Y2D1 282 aaPredicted RBP6.54□□□□□ -1.36
RNU6-221P-201ENST00000459541 C1QBPQ07021 282 aaKnown RBP6.53□□□□□ -1.36
RNU6-221P-201ENST00000459541 SPINK5Q9NQ38 1064 aaPredicted RBP6.51□□□□□ -1.37
RNU6-221P-201ENST00000459541 ATXN8OSP0DMR3 200 aa6.5□□□□□ -1.37
RNU6-221P-201ENST00000459541 CAPN15O75808 1086 aa6.47□□□□□ -1.37
RNU6-221P-201ENST00000459541 APLP2Q06481 763 aa6.47□□□□□ -1.37
RNU6-221P-201ENST00000459541 TRHP20396 242 aaPredicted RBP6.46□□□□□ -1.38
RNU6-221P-201ENST00000459541 CACNB1Q02641 598 aaPredicted RBP6.45□□□□□ -1.38
RNU6-221P-201ENST00000459541 ZNF219Q9P2Y4 722 aaPredicted RBP6.4□□□□□ -1.38
RNU6-221P-201ENST00000459541 ABCB7O75027 752 aa6.38□□□□□ -1.39
RNU6-221P-201ENST00000459541 POLA2Q14181 598 aa6.35□□□□□ -1.39
RNU6-221P-201ENST00000459541 DSG3P32926 999 aa6.33□□□□□ -1.4
RNU6-221P-201ENST00000459541 MKRN4PQ13434 485 aaPredicted RBP6.24□□□□□ -1.41
RNU6-221P-201ENST00000459541 FBLN2P98095 1184 aa6.21□□□□□ -1.42
RNU6-221P-201ENST00000459541 ZBTB12Q9Y330 459 aaPredicted RBP6.18□□□□□ -1.42
RNU6-221P-201ENST00000459541 FKBP8Q14318 412 aa6.17□□□□□ -1.42
RNU6-221P-201ENST00000459541 OSCARQ8IYS5 282 aa6.14□□□□□ -1.43
RNU6-221P-201ENST00000459541 SPDYE4A6NLX3 237 aa6.11□□□□□ -1.43
RNU6-221P-201ENST00000459541 ZNF692Q9BU19 519 aaPredicted RBP6.06□□□□□ -1.44
RNU6-221P-201ENST00000459541 SPDYE2BA6NHP3 402 aa6.04□□□□□ -1.44
RNU6-221P-201ENST00000459541 SPDYE6P0CI01 402 aa6.04□□□□□ -1.44
RNU6-221P-201ENST00000459541 SPDYE2Q495Y8 402 aa6.04□□□□□ -1.44
RNU6-221P-201ENST00000459541 SSUH2Q9Y2M2 353 aa6.01□□□□□ -1.45
RNU6-221P-201ENST00000459541 RBM42Q9BTD8 480 aaKnown RBP5.99□□□□□ -1.45
RNU6-221P-201ENST00000459541 PABPN1Q86U42 306 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU6-221P-201ENST00000459541 PROM2Q8N271 834 aa5.98□□□□□ -1.45
RNU6-221P-201ENST00000459541 AKT1S1Q96B36 256 aa5.94□□□□□ -1.46
RNU6-221P-201ENST00000459541 REM2Q8IYK8 340 aaPredicted RBP5.91□□□□□ -1.46
RNU6-221P-201ENST00000459541 FBXO3Q9UK99 471 aa5.89□□□□□ -1.47
RNU6-221P-201ENST00000459541 CLEC11AQ9Y240 323 aa5.89□□□□□ -1.47
RNU6-221P-201ENST00000459541 PITPNM1O00562 1244 aa5.86□□□□□ -1.47
RNU6-221P-201ENST00000459541 SPDYE1Q8NFV5 336 aaPredicted RBP5.86□□□□□ -1.47
RNU6-221P-201ENST00000459541 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
RNU6-221P-201ENST00000459541 VASPP50552 380 aaPredicted RBP5.84□□□□□ -1.47
RNU6-221P-201ENST00000459541 PRR29P0C7W0 189 aa5.8□□□□□ -1.48
RNU6-221P-201ENST00000459541 MIER1Q8N108 512 aa5.8□□□□□ -1.48
RNU6-221P-201ENST00000459541 PLCD3Q8N3E9 789 aa5.79□□□□□ -1.48
RNU6-221P-201ENST00000459541 IFNLR1Q8IU57 520 aaPredicted RBP5.78□□□□□ -1.48
RNU6-221P-201ENST00000459541 CHRDL2Q6WN34 429 aa5.76□□□□□ -1.49
RNU6-221P-201ENST00000459541 CHADLQ6NUI6 762 aa5.75□□□□□ -1.49
RNU6-221P-201ENST00000459541 KLHL34Q8N239 644 aa5.75□□□□□ -1.49
RNU6-221P-201ENST00000459541 CREBZFQ9NS37 354 aa5.75□□□□□ -1.49
RNU6-221P-201ENST00000459541 PLEKHG5O94827 1062 aa5.72□□□□□ -1.49
RNU6-221P-201ENST00000459541 PRKAR2AP13861 404 aaKnown RBP5.71□□□□□ -1.5
RNU6-221P-201ENST00000459541 FXR2P51116 673 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNU6-221P-201ENST00000459541 PIP4P2Q8N4L2 257 aa5.7□□□□□ -1.5
RNU6-221P-201ENST00000459541 MNX1P50219 401 aaPredicted RBP5.69□□□□□ -1.5
RNU6-221P-201ENST00000459541 RTN4Q9NQC3 1192 aaKnown RBP5.69□□□□□ -1.5
RNU6-221P-201ENST00000459541 SPOCK2Q92563 424 aa5.68□□□□□ -1.5
RNU6-221P-201ENST00000459541 ZBTB47Q9UFB7 747 aaPredicted RBP5.67□□□□□ -1.5
RNU6-221P-201ENST00000459541 AMER1Q5JTC6 1135 aaPredicted RBP5.65□□□□□ -1.5
RNU6-221P-201ENST00000459541 FARP1Q9Y4F1 1045 aaPredicted RBP5.65□□□□□ -1.5
RNU6-221P-201ENST00000459541 NUBP1P53384 320 aa5.63□□□□□ -1.51
RNU6-221P-201ENST00000459541 POTEHQ6S545 545 aa5.63□□□□□ -1.51
RNU6-221P-201ENST00000459541 NPM1P06748 294 aaKnown RBP eCLIP5.62□□□□□ -1.51
RNU6-221P-201ENST00000459541 RASEFQ8IZ41 740 aa5.62□□□□□ -1.51
RNU6-221P-201ENST00000459541 CIZ1Q9ULV3 898 aaPredicted RBP5.62□□□□□ -1.51
RNU6-221P-201ENST00000459541 PKD2Q13563 968 aa5.6□□□□□ -1.51
RNU6-221P-201ENST00000459541 DCAF8Q5TAQ9 597 aa5.6□□□□□ -1.51
RNU6-221P-201ENST00000459541 TSPYL2Q9H2G4 693 aaPredicted RBP5.59□□□□□ -1.51
RNU6-221P-201ENST00000459541 FAM212AQ96EL1 285 aa5.57□□□□□ -1.52
RNU6-221P-201ENST00000459541 ECM2O94769 699 aaPredicted RBP5.56□□□□□ -1.52
RNU6-221P-201ENST00000459541 GSE1Q14687 1217 aa5.56□□□□□ -1.52
RNU6-221P-201ENST00000459541 PYGBP11216 843 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms