RNA–Protein interactions for RNA: ENST00000458168.1

LINC00709-201, long intergenic non-protein coding RNA 709, humanhuman

TSL 2 BASIC

Gene LINC00709, Length 494 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00709-201ENST00000458168 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
LINC00709-201ENST00000458168 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
LINC00709-201ENST00000458168 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
LINC00709-201ENST00000458168 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
LINC00709-201ENST00000458168 FOXD1Q16676 465 aa20.16■□□□□ 0.82
LINC00709-201ENST00000458168 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
LINC00709-201ENST00000458168 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
LINC00709-201ENST00000458168 ADRA2BP18089 450 aa19.26■□□□□ 0.67
LINC00709-201ENST00000458168 PIAS4Q8N2W9 510 aaPredicted RBP18.99■□□□□ 0.63
LINC00709-201ENST00000458168 MSH5O43196 834 aa18.67■□□□□ 0.58
LINC00709-201ENST00000458168 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
LINC00709-201ENST00000458168 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
LINC00709-201ENST00000458168 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
LINC00709-201ENST00000458168 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
LINC00709-201ENST00000458168 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
LINC00709-201ENST00000458168 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
LINC00709-201ENST00000458168 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
LINC00709-201ENST00000458168 KCNA4P22459 653 aa17.14■□□□□ 0.33
LINC00709-201ENST00000458168 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
LINC00709-201ENST00000458168 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
LINC00709-201ENST00000458168 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
LINC00709-201ENST00000458168 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
LINC00709-201ENST00000458168 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
LINC00709-201ENST00000458168 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
LINC00709-201ENST00000458168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
LINC00709-201ENST00000458168 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
LINC00709-201ENST00000458168 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
LINC00709-201ENST00000458168 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
LINC00709-201ENST00000458168 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
LINC00709-201ENST00000458168 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
LINC00709-201ENST00000458168 ZBTB22O15209 634 aa15.76■□□□□ 0.11
LINC00709-201ENST00000458168 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
LINC00709-201ENST00000458168 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
LINC00709-201ENST00000458168 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
LINC00709-201ENST00000458168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
LINC00709-201ENST00000458168 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
LINC00709-201ENST00000458168 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
LINC00709-201ENST00000458168 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
LINC00709-201ENST00000458168 APLP2Q06481 763 aa15.5■□□□□ 0.07
LINC00709-201ENST00000458168 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
LINC00709-201ENST00000458168 CAPN15O75808 1086 aa15.39■□□□□ 0.05
LINC00709-201ENST00000458168 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
LINC00709-201ENST00000458168 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
LINC00709-201ENST00000458168 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
LINC00709-201ENST00000458168 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
LINC00709-201ENST00000458168 DSG3P32926 999 aa15.14■□□□□ 0.01
LINC00709-201ENST00000458168 ABCB7O75027 752 aa15.07■□□□□ 0
LINC00709-201ENST00000458168 POLA2Q14181 598 aa14.99□□□□□ -0.01
LINC00709-201ENST00000458168 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
LINC00709-201ENST00000458168 FBLN2P98095 1184 aa14.65□□□□□ -0.06
LINC00709-201ENST00000458168 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
LINC00709-201ENST00000458168 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
LINC00709-201ENST00000458168 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
LINC00709-201ENST00000458168 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
LINC00709-201ENST00000458168 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
LINC00709-201ENST00000458168 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
LINC00709-201ENST00000458168 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
LINC00709-201ENST00000458168 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
LINC00709-201ENST00000458168 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
LINC00709-201ENST00000458168 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
LINC00709-201ENST00000458168 FKBP8Q14318 412 aa14.1□□□□□ -0.15
LINC00709-201ENST00000458168 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
LINC00709-201ENST00000458168 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00709-201ENST00000458168 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
LINC00709-201ENST00000458168 PROM2Q8N271 834 aa13.95□□□□□ -0.18
LINC00709-201ENST00000458168 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
LINC00709-201ENST00000458168 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
LINC00709-201ENST00000458168 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
LINC00709-201ENST00000458168 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
LINC00709-201ENST00000458168 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
LINC00709-201ENST00000458168 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00709-201ENST00000458168 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
LINC00709-201ENST00000458168 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
LINC00709-201ENST00000458168 POTEHQ6S545 545 aa13.6□□□□□ -0.23
LINC00709-201ENST00000458168 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
LINC00709-201ENST00000458168 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
LINC00709-201ENST00000458168 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
LINC00709-201ENST00000458168 MIER1Q8N108 512 aa13.49□□□□□ -0.25
LINC00709-201ENST00000458168 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
LINC00709-201ENST00000458168 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
LINC00709-201ENST00000458168 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
LINC00709-201ENST00000458168 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
LINC00709-201ENST00000458168 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
LINC00709-201ENST00000458168 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
LINC00709-201ENST00000458168 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00709-201ENST00000458168 HAX1O00165 279 aa13.29□□□□□ -0.28
LINC00709-201ENST00000458168 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
LINC00709-201ENST00000458168 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
LINC00709-201ENST00000458168 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
LINC00709-201ENST00000458168 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
LINC00709-201ENST00000458168 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
LINC00709-201ENST00000458168 NUBP1P53384 320 aa13.15□□□□□ -0.3
LINC00709-201ENST00000458168 EVX2Q03828 476 aa13.14□□□□□ -0.31
LINC00709-201ENST00000458168 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
LINC00709-201ENST00000458168 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
LINC00709-201ENST00000458168 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
LINC00709-201ENST00000458168 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
LINC00709-201ENST00000458168 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
LINC00709-201ENST00000458168 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
LINC00709-201ENST00000458168 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms