RNA–Protein interactions for RNA: ENST00000456817.5

BBX-218, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-218ENST00000456817 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
BBX-218ENST00000456817 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
BBX-218ENST00000456817 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
BBX-218ENST00000456817 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
BBX-218ENST00000456817 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
BBX-218ENST00000456817 FOXD1Q16676 465 aa18.51■□□□□ 0.55
BBX-218ENST00000456817 ADRA2BP18089 450 aa18.17■□□□□ 0.5
BBX-218ENST00000456817 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
BBX-218ENST00000456817 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
BBX-218ENST00000456817 KCNA4P22459 653 aa17.26■□□□□ 0.35
BBX-218ENST00000456817 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
BBX-218ENST00000456817 MSH5O43196 834 aa16.92■□□□□ 0.3
BBX-218ENST00000456817 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
BBX-218ENST00000456817 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
BBX-218ENST00000456817 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
BBX-218ENST00000456817 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
BBX-218ENST00000456817 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
BBX-218ENST00000456817 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
BBX-218ENST00000456817 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
BBX-218ENST00000456817 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
BBX-218ENST00000456817 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
BBX-218ENST00000456817 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
BBX-218ENST00000456817 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
BBX-218ENST00000456817 HOXD11P31277 338 aaPredicted RBP15.94■□□□□ 0.14
BBX-218ENST00000456817 ZBTB22O15209 634 aa15.9■□□□□ 0.14
BBX-218ENST00000456817 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
BBX-218ENST00000456817 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
BBX-218ENST00000456817 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
BBX-218ENST00000456817 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
BBX-218ENST00000456817 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
BBX-218ENST00000456817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.015e-7■■■■□ 25.5
BBX-218ENST00000456817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
BBX-218ENST00000456817 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
BBX-218ENST00000456817 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
BBX-218ENST00000456817 SAMD1Q6SPF0 538 aaPredicted RBP14.95□□□□□ -0.02
BBX-218ENST00000456817 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
BBX-218ENST00000456817 APLP2Q06481 763 aa14.71□□□□□ -0.05
BBX-218ENST00000456817 FKBP8Q14318 412 aa14.59□□□□□ -0.07
BBX-218ENST00000456817 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
BBX-218ENST00000456817 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
BBX-218ENST00000456817 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
BBX-218ENST00000456817 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
BBX-218ENST00000456817 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
BBX-218ENST00000456817 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
BBX-218ENST00000456817 CAPN15O75808 1086 aa14.29□□□□□ -0.12
BBX-218ENST00000456817 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
BBX-218ENST00000456817 POLA2Q14181 598 aa14.23□□□□□ -0.13
BBX-218ENST00000456817 FBLN2P98095 1184 aa14.2□□□□□ -0.14
BBX-218ENST00000456817 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
BBX-218ENST00000456817 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
BBX-218ENST00000456817 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
BBX-218ENST00000456817 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
BBX-218ENST00000456817 ABCB7O75027 752 aa14.05□□□□□ -0.16
BBX-218ENST00000456817 PROM2Q8N271 834 aa14.04□□□□□ -0.16
BBX-218ENST00000456817 DSG3P32926 999 aa13.99□□□□□ -0.17
BBX-218ENST00000456817 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
BBX-218ENST00000456817 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
BBX-218ENST00000456817 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
BBX-218ENST00000456817 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
BBX-218ENST00000456817 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
BBX-218ENST00000456817 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
BBX-218ENST00000456817 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
BBX-218ENST00000456817 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
BBX-218ENST00000456817 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
BBX-218ENST00000456817 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
BBX-218ENST00000456817 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
BBX-218ENST00000456817 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
BBX-218ENST00000456817 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
BBX-218ENST00000456817 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
BBX-218ENST00000456817 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
BBX-218ENST00000456817 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
BBX-218ENST00000456817 PKD2Q13563 968 aa13.35□□□□□ -0.27
BBX-218ENST00000456817 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
BBX-218ENST00000456817 MIER1Q8N108 512 aa13.33□□□□□ -0.28
BBX-218ENST00000456817 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
BBX-218ENST00000456817 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
BBX-218ENST00000456817 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
BBX-218ENST00000456817 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
BBX-218ENST00000456817 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
BBX-218ENST00000456817 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
BBX-218ENST00000456817 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
BBX-218ENST00000456817 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
BBX-218ENST00000456817 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
BBX-218ENST00000456817 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
BBX-218ENST00000456817 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
BBX-218ENST00000456817 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
BBX-218ENST00000456817 RGL2O15211 777 aa13.01□□□□□ -0.33
BBX-218ENST00000456817 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
BBX-218ENST00000456817 NUBP1P53384 320 aa12.98□□□□□ -0.33
BBX-218ENST00000456817 GSE1Q14687 1217 aa12.97□□□□□ -0.33
BBX-218ENST00000456817 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
BBX-218ENST00000456817 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
BBX-218ENST00000456817 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
BBX-218ENST00000456817 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
BBX-218ENST00000456817 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
BBX-218ENST00000456817 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
BBX-218ENST00000456817 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
BBX-218ENST00000456817 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
BBX-218ENST00000456817 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
BBX-218ENST00000456817 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms