RNA–Protein interactions for RNA: ENST00000456646.1

CFTRP1-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 1, humanhuman

BASIC

Gene CFTRP1, Length 183 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP1-201ENST00000456646 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
CFTRP1-201ENST00000456646 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
CFTRP1-201ENST00000456646 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
CFTRP1-201ENST00000456646 PHF23Q9BUL5 403 aaPredicted RBP20.59■□□□□ 0.89
CFTRP1-201ENST00000456646 FOXD1Q16676 465 aa19.35■□□□□ 0.69
CFTRP1-201ENST00000456646 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
CFTRP1-201ENST00000456646 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
CFTRP1-201ENST00000456646 MSH5O43196 834 aa18.46■□□□□ 0.55
CFTRP1-201ENST00000456646 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
CFTRP1-201ENST00000456646 ADRA2BP18089 450 aa18.18■□□□□ 0.5
CFTRP1-201ENST00000456646 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
CFTRP1-201ENST00000456646 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
CFTRP1-201ENST00000456646 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
CFTRP1-201ENST00000456646 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CFTRP1-201ENST00000456646 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
CFTRP1-201ENST00000456646 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
CFTRP1-201ENST00000456646 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
CFTRP1-201ENST00000456646 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
CFTRP1-201ENST00000456646 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
CFTRP1-201ENST00000456646 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
CFTRP1-201ENST00000456646 KCNA4P22459 653 aa15.91■□□□□ 0.14
CFTRP1-201ENST00000456646 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
CFTRP1-201ENST00000456646 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
CFTRP1-201ENST00000456646 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
CFTRP1-201ENST00000456646 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
CFTRP1-201ENST00000456646 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
CFTRP1-201ENST00000456646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
CFTRP1-201ENST00000456646 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
CFTRP1-201ENST00000456646 SLC4A2P04920 1241 aa15.07■□□□□ 0
CFTRP1-201ENST00000456646 POTEHQ6S545 545 aa14.96□□□□□ -0.01
CFTRP1-201ENST00000456646 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
CFTRP1-201ENST00000456646 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
CFTRP1-201ENST00000456646 ZBTB22O15209 634 aa14.66□□□□□ -0.06
CFTRP1-201ENST00000456646 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
CFTRP1-201ENST00000456646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
CFTRP1-201ENST00000456646 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
CFTRP1-201ENST00000456646 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CFTRP1-201ENST00000456646 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
CFTRP1-201ENST00000456646 APLP2Q06481 763 aa14.54□□□□□ -0.08
CFTRP1-201ENST00000456646 CAPN15O75808 1086 aa14.49□□□□□ -0.09
CFTRP1-201ENST00000456646 DSG3P32926 999 aa14.39□□□□□ -0.11
CFTRP1-201ENST00000456646 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
CFTRP1-201ENST00000456646 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
CFTRP1-201ENST00000456646 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
CFTRP1-201ENST00000456646 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
CFTRP1-201ENST00000456646 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
CFTRP1-201ENST00000456646 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
CFTRP1-201ENST00000456646 ABCB7O75027 752 aa14.2□□□□□ -0.14
CFTRP1-201ENST00000456646 POLA2Q14181 598 aa14.11□□□□□ -0.15
CFTRP1-201ENST00000456646 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
CFTRP1-201ENST00000456646 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
CFTRP1-201ENST00000456646 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
CFTRP1-201ENST00000456646 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
CFTRP1-201ENST00000456646 FBLN2P98095 1184 aa13.67□□□□□ -0.22
CFTRP1-201ENST00000456646 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
CFTRP1-201ENST00000456646 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
CFTRP1-201ENST00000456646 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
CFTRP1-201ENST00000456646 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
CFTRP1-201ENST00000456646 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
CFTRP1-201ENST00000456646 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
CFTRP1-201ENST00000456646 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
CFTRP1-201ENST00000456646 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
CFTRP1-201ENST00000456646 HAX1O00165 279 aa13.18□□□□□ -0.3
CFTRP1-201ENST00000456646 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
CFTRP1-201ENST00000456646 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
CFTRP1-201ENST00000456646 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
CFTRP1-201ENST00000456646 PROM2Q8N271 834 aa13.04□□□□□ -0.32
CFTRP1-201ENST00000456646 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
CFTRP1-201ENST00000456646 EVX2Q03828 476 aa12.96□□□□□ -0.33
CFTRP1-201ENST00000456646 FKBP8Q14318 412 aa12.93□□□□□ -0.34
CFTRP1-201ENST00000456646 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
CFTRP1-201ENST00000456646 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
CFTRP1-201ENST00000456646 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
CFTRP1-201ENST00000456646 LHX8Q68G74 356 aa12.79□□□□□ -0.36
CFTRP1-201ENST00000456646 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
CFTRP1-201ENST00000456646 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
CFTRP1-201ENST00000456646 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
CFTRP1-201ENST00000456646 GABBR2O75899 941 aa12.66□□□□□ -0.38
CFTRP1-201ENST00000456646 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
CFTRP1-201ENST00000456646 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
CFTRP1-201ENST00000456646 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
CFTRP1-201ENST00000456646 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
CFTRP1-201ENST00000456646 MIER1Q8N108 512 aa12.52□□□□□ -0.41
CFTRP1-201ENST00000456646 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
CFTRP1-201ENST00000456646 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
CFTRP1-201ENST00000456646 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
CFTRP1-201ENST00000456646 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
CFTRP1-201ENST00000456646 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
CFTRP1-201ENST00000456646 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
CFTRP1-201ENST00000456646 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
CFTRP1-201ENST00000456646 CLCN6P51797 869 aa12.32□□□□□ -0.44
CFTRP1-201ENST00000456646 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
CFTRP1-201ENST00000456646 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
CFTRP1-201ENST00000456646 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
CFTRP1-201ENST00000456646 NUBP1P53384 320 aa12.29□□□□□ -0.44
CFTRP1-201ENST00000456646 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms