RNA–Protein interactions for RNA: ENST00000456366.1

SNRPFP4-201, Transcript of small nuclear ribonucleoprotein polypeptide F pseudogene 4, humanhuman

BASIC

Gene SNRPFP4, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP4-201ENST00000456366 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
SNRPFP4-201ENST00000456366 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
SNRPFP4-201ENST00000456366 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
SNRPFP4-201ENST00000456366 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
SNRPFP4-201ENST00000456366 FOXD1Q16676 465 aa16.52■□□□□ 0.24
SNRPFP4-201ENST00000456366 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
SNRPFP4-201ENST00000456366 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
SNRPFP4-201ENST00000456366 ADRA2BP18089 450 aa15.92■□□□□ 0.14
SNRPFP4-201ENST00000456366 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
SNRPFP4-201ENST00000456366 MSH5O43196 834 aa15.01□□□□□ -0.01
SNRPFP4-201ENST00000456366 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
SNRPFP4-201ENST00000456366 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
SNRPFP4-201ENST00000456366 KCNA4P22459 653 aa14.4□□□□□ -0.1
SNRPFP4-201ENST00000456366 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
SNRPFP4-201ENST00000456366 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
SNRPFP4-201ENST00000456366 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
SNRPFP4-201ENST00000456366 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
SNRPFP4-201ENST00000456366 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
SNRPFP4-201ENST00000456366 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
SNRPFP4-201ENST00000456366 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
SNRPFP4-201ENST00000456366 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
SNRPFP4-201ENST00000456366 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
SNRPFP4-201ENST00000456366 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
SNRPFP4-201ENST00000456366 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
SNRPFP4-201ENST00000456366 ZBTB22O15209 634 aa13.37□□□□□ -0.27
SNRPFP4-201ENST00000456366 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
SNRPFP4-201ENST00000456366 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
SNRPFP4-201ENST00000456366 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
SNRPFP4-201ENST00000456366 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
SNRPFP4-201ENST00000456366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNRPFP4-201ENST00000456366 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
SNRPFP4-201ENST00000456366 RNF39Q9H2S5 420 aa13□□□□□ -0.33
SNRPFP4-201ENST00000456366 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
SNRPFP4-201ENST00000456366 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
SNRPFP4-201ENST00000456366 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
SNRPFP4-201ENST00000456366 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
SNRPFP4-201ENST00000456366 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
SNRPFP4-201ENST00000456366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
SNRPFP4-201ENST00000456366 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
SNRPFP4-201ENST00000456366 ATXN8OSP0DMR3 200 aa12.58□□□□□ -0.4
SNRPFP4-201ENST00000456366 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
SNRPFP4-201ENST00000456366 CAPN15O75808 1086 aa12.5□□□□□ -0.41
SNRPFP4-201ENST00000456366 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
SNRPFP4-201ENST00000456366 APLP2Q06481 763 aa12.41□□□□□ -0.42
SNRPFP4-201ENST00000456366 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
SNRPFP4-201ENST00000456366 DSG3P32926 999 aa12.39□□□□□ -0.43
SNRPFP4-201ENST00000456366 ABCB7O75027 752 aa12.38□□□□□ -0.43
SNRPFP4-201ENST00000456366 POLA2Q14181 598 aa12.3□□□□□ -0.44
SNRPFP4-201ENST00000456366 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
SNRPFP4-201ENST00000456366 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
SNRPFP4-201ENST00000456366 FBLN2P98095 1184 aa11.92□□□□□ -0.5
SNRPFP4-201ENST00000456366 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
SNRPFP4-201ENST00000456366 FKBP8Q14318 412 aa11.84□□□□□ -0.51
SNRPFP4-201ENST00000456366 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
SNRPFP4-201ENST00000456366 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
SNRPFP4-201ENST00000456366 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
SNRPFP4-201ENST00000456366 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
SNRPFP4-201ENST00000456366 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
SNRPFP4-201ENST00000456366 PROM2Q8N271 834 aa11.69□□□□□ -0.54
SNRPFP4-201ENST00000456366 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
SNRPFP4-201ENST00000456366 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
SNRPFP4-201ENST00000456366 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNRPFP4-201ENST00000456366 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
SNRPFP4-201ENST00000456366 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
SNRPFP4-201ENST00000456366 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
SNRPFP4-201ENST00000456366 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
SNRPFP4-201ENST00000456366 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
SNRPFP4-201ENST00000456366 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
SNRPFP4-201ENST00000456366 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
SNRPFP4-201ENST00000456366 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
SNRPFP4-201ENST00000456366 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
SNRPFP4-201ENST00000456366 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
SNRPFP4-201ENST00000456366 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNRPFP4-201ENST00000456366 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
SNRPFP4-201ENST00000456366 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
SNRPFP4-201ENST00000456366 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
SNRPFP4-201ENST00000456366 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
SNRPFP4-201ENST00000456366 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
SNRPFP4-201ENST00000456366 MIER1Q8N108 512 aa11.09□□□□□ -0.63
SNRPFP4-201ENST00000456366 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
SNRPFP4-201ENST00000456366 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
SNRPFP4-201ENST00000456366 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
SNRPFP4-201ENST00000456366 NUBP1P53384 320 aa10.95□□□□□ -0.66
SNRPFP4-201ENST00000456366 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
SNRPFP4-201ENST00000456366 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
SNRPFP4-201ENST00000456366 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
SNRPFP4-201ENST00000456366 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
SNRPFP4-201ENST00000456366 POTEHQ6S545 545 aa10.88□□□□□ -0.67
SNRPFP4-201ENST00000456366 EVX2Q03828 476 aa10.85□□□□□ -0.67
SNRPFP4-201ENST00000456366 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
SNRPFP4-201ENST00000456366 PKD2Q13563 968 aa10.83□□□□□ -0.68
SNRPFP4-201ENST00000456366 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
SNRPFP4-201ENST00000456366 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
SNRPFP4-201ENST00000456366 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNRPFP4-201ENST00000456366 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
SNRPFP4-201ENST00000456366 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
SNRPFP4-201ENST00000456366 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
SNRPFP4-201ENST00000456366 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
SNRPFP4-201ENST00000456366 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
SNRPFP4-201ENST00000456366 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms