RNA–Protein interactions for RNA: ENST00000456284.5

NDUFS1-208, Transcript of NADH:ubiquinone oxidoreductase core subunit S1, humanhuman

TSL 4

Gene NDUFS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1-208ENST00000456284 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
NDUFS1-208ENST00000456284 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
NDUFS1-208ENST00000456284 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
NDUFS1-208ENST00000456284 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
NDUFS1-208ENST00000456284 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
NDUFS1-208ENST00000456284 FOXD1Q16676 465 aa20.23■□□□□ 0.83
NDUFS1-208ENST00000456284 ADRA2BP18089 450 aa19.48■□□□□ 0.71
NDUFS1-208ENST00000456284 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
NDUFS1-208ENST00000456284 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
NDUFS1-208ENST00000456284 MSH5O43196 834 aa18.68■□□□□ 0.58
NDUFS1-208ENST00000456284 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
NDUFS1-208ENST00000456284 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
NDUFS1-208ENST00000456284 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
NDUFS1-208ENST00000456284 KCNA4P22459 653 aa17.61■□□□□ 0.41
NDUFS1-208ENST00000456284 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
NDUFS1-208ENST00000456284 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
NDUFS1-208ENST00000456284 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
NDUFS1-208ENST00000456284 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
NDUFS1-208ENST00000456284 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
NDUFS1-208ENST00000456284 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
NDUFS1-208ENST00000456284 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
NDUFS1-208ENST00000456284 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
NDUFS1-208ENST00000456284 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
NDUFS1-208ENST00000456284 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
NDUFS1-208ENST00000456284 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
NDUFS1-208ENST00000456284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.24e-9■□□□□ 9.4
NDUFS1-208ENST00000456284 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
NDUFS1-208ENST00000456284 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
NDUFS1-208ENST00000456284 ZBTB22O15209 634 aa16.17■□□□□ 0.18
NDUFS1-208ENST00000456284 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
NDUFS1-208ENST00000456284 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
NDUFS1-208ENST00000456284 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
NDUFS1-208ENST00000456284 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
NDUFS1-208ENST00000456284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
NDUFS1-208ENST00000456284 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
NDUFS1-208ENST00000456284 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
NDUFS1-208ENST00000456284 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
NDUFS1-208ENST00000456284 APLP2Q06481 763 aa15.7■□□□□ 0.1
NDUFS1-208ENST00000456284 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
NDUFS1-208ENST00000456284 CACNB1Q02641 598 aaPredicted RBP15.59■□□□□ 0.09
NDUFS1-208ENST00000456284 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
NDUFS1-208ENST00000456284 CAPN15O75808 1086 aa15.53■□□□□ 0.08
NDUFS1-208ENST00000456284 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
NDUFS1-208ENST00000456284 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
NDUFS1-208ENST00000456284 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
NDUFS1-208ENST00000456284 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
NDUFS1-208ENST00000456284 ABCB7O75027 752 aa15.23■□□□□ 0.03
NDUFS1-208ENST00000456284 DSG3P32926 999 aa15.22■□□□□ 0.03
NDUFS1-208ENST00000456284 POLA2Q14181 598 aa15.2■□□□□ 0.02
NDUFS1-208ENST00000456284 ZBTB12Q9Y330 459 aaPredicted RBP14.97□□□□□ -0.01
NDUFS1-208ENST00000456284 FBLN2P98095 1184 aa14.93□□□□□ -0.02
NDUFS1-208ENST00000456284 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
NDUFS1-208ENST00000456284 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
NDUFS1-208ENST00000456284 FKBP8Q14318 412 aa14.61□□□□□ -0.07
NDUFS1-208ENST00000456284 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
NDUFS1-208ENST00000456284 SPDYE2BA6NHP3 402 aa14.54□□□□□ -0.08
NDUFS1-208ENST00000456284 SPDYE6P0CI01 402 aa14.54□□□□□ -0.08
NDUFS1-208ENST00000456284 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
NDUFS1-208ENST00000456284 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
NDUFS1-208ENST00000456284 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
NDUFS1-208ENST00000456284 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
NDUFS1-208ENST00000456284 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
NDUFS1-208ENST00000456284 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
NDUFS1-208ENST00000456284 PROM2Q8N271 834 aa14.27□□□□□ -0.13
NDUFS1-208ENST00000456284 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
NDUFS1-208ENST00000456284 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
NDUFS1-208ENST00000456284 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
NDUFS1-208ENST00000456284 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
NDUFS1-208ENST00000456284 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
NDUFS1-208ENST00000456284 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
NDUFS1-208ENST00000456284 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
NDUFS1-208ENST00000456284 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
NDUFS1-208ENST00000456284 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
NDUFS1-208ENST00000456284 MIER1Q8N108 512 aa13.83□□□□□ -0.2
NDUFS1-208ENST00000456284 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
NDUFS1-208ENST00000456284 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
NDUFS1-208ENST00000456284 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.218e-9■□□□□ 10.8
NDUFS1-208ENST00000456284 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
NDUFS1-208ENST00000456284 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
NDUFS1-208ENST00000456284 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
NDUFS1-208ENST00000456284 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
NDUFS1-208ENST00000456284 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
NDUFS1-208ENST00000456284 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
NDUFS1-208ENST00000456284 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
NDUFS1-208ENST00000456284 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
NDUFS1-208ENST00000456284 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
NDUFS1-208ENST00000456284 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
NDUFS1-208ENST00000456284 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
NDUFS1-208ENST00000456284 SPOCK2Q92563 424 aa13.54□□□□□ -0.24
NDUFS1-208ENST00000456284 POTEHQ6S545 545 aa13.44□□□□□ -0.26
NDUFS1-208ENST00000456284 NUBP1P53384 320 aa13.42□□□□□ -0.26
NDUFS1-208ENST00000456284 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
NDUFS1-208ENST00000456284 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
NDUFS1-208ENST00000456284 AMER1Q5JTC6 1135 aaPredicted RBP13.36□□□□□ -0.27
NDUFS1-208ENST00000456284 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
NDUFS1-208ENST00000456284 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
NDUFS1-208ENST00000456284 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
NDUFS1-208ENST00000456284 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
NDUFS1-208ENST00000456284 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
NDUFS1-208ENST00000456284 GSE1Q14687 1217 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 282.6 ms