RNA–Protein interactions for RNA: ENST00000455429.3

C1DP4-201, Transcript of C1D nuclear receptor corepressor pseudogene 4, humanhuman

BASIC

Gene C1DP4, Length 424 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP4-201ENST00000455429 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
C1DP4-201ENST00000455429 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
C1DP4-201ENST00000455429 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
C1DP4-201ENST00000455429 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
C1DP4-201ENST00000455429 FOXD1Q16676 465 aa15.87■□□□□ 0.13
C1DP4-201ENST00000455429 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
C1DP4-201ENST00000455429 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
C1DP4-201ENST00000455429 ADRA2BP18089 450 aa15.18■□□□□ 0.02
C1DP4-201ENST00000455429 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
C1DP4-201ENST00000455429 MSH5O43196 834 aa14.71□□□□□ -0.05
C1DP4-201ENST00000455429 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
C1DP4-201ENST00000455429 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
C1DP4-201ENST00000455429 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
C1DP4-201ENST00000455429 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
C1DP4-201ENST00000455429 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
C1DP4-201ENST00000455429 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
C1DP4-201ENST00000455429 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
C1DP4-201ENST00000455429 KCNA4P22459 653 aa13.52□□□□□ -0.25
C1DP4-201ENST00000455429 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
C1DP4-201ENST00000455429 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
C1DP4-201ENST00000455429 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
C1DP4-201ENST00000455429 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
C1DP4-201ENST00000455429 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
C1DP4-201ENST00000455429 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
C1DP4-201ENST00000455429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
C1DP4-201ENST00000455429 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
C1DP4-201ENST00000455429 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
C1DP4-201ENST00000455429 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
C1DP4-201ENST00000455429 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
C1DP4-201ENST00000455429 ZBTB22O15209 634 aa12.44□□□□□ -0.42
C1DP4-201ENST00000455429 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
C1DP4-201ENST00000455429 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
C1DP4-201ENST00000455429 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
C1DP4-201ENST00000455429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
C1DP4-201ENST00000455429 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
C1DP4-201ENST00000455429 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
C1DP4-201ENST00000455429 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
C1DP4-201ENST00000455429 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
C1DP4-201ENST00000455429 APLP2Q06481 763 aa12.21□□□□□ -0.45
C1DP4-201ENST00000455429 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
C1DP4-201ENST00000455429 CAPN15O75808 1086 aa12.12□□□□□ -0.47
C1DP4-201ENST00000455429 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
C1DP4-201ENST00000455429 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
C1DP4-201ENST00000455429 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
C1DP4-201ENST00000455429 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
C1DP4-201ENST00000455429 DSG3P32926 999 aa11.93□□□□□ -0.5
C1DP4-201ENST00000455429 ABCB7O75027 752 aa11.88□□□□□ -0.51
C1DP4-201ENST00000455429 POLA2Q14181 598 aa11.82□□□□□ -0.52
C1DP4-201ENST00000455429 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
C1DP4-201ENST00000455429 FBLN2P98095 1184 aa11.54□□□□□ -0.56
C1DP4-201ENST00000455429 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
C1DP4-201ENST00000455429 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
C1DP4-201ENST00000455429 RBM42Q9BTD8 480 aaKnown RBP11.4□□□□□ -0.58
C1DP4-201ENST00000455429 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
C1DP4-201ENST00000455429 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
C1DP4-201ENST00000455429 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
C1DP4-201ENST00000455429 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
C1DP4-201ENST00000455429 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
C1DP4-201ENST00000455429 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
C1DP4-201ENST00000455429 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
C1DP4-201ENST00000455429 FKBP8Q14318 412 aa11.12□□□□□ -0.63
C1DP4-201ENST00000455429 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
C1DP4-201ENST00000455429 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
C1DP4-201ENST00000455429 PROM2Q8N271 834 aa11□□□□□ -0.65
C1DP4-201ENST00000455429 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
C1DP4-201ENST00000455429 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
C1DP4-201ENST00000455429 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
C1DP4-201ENST00000455429 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
C1DP4-201ENST00000455429 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
C1DP4-201ENST00000455429 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
C1DP4-201ENST00000455429 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
C1DP4-201ENST00000455429 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
C1DP4-201ENST00000455429 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
C1DP4-201ENST00000455429 POTEHQ6S545 545 aa10.72□□□□□ -0.69
C1DP4-201ENST00000455429 PRKAR2AP13861 404 aaKnown RBP10.71□□□□□ -0.69
C1DP4-201ENST00000455429 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
C1DP4-201ENST00000455429 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
C1DP4-201ENST00000455429 MIER1Q8N108 512 aa10.64□□□□□ -0.71
C1DP4-201ENST00000455429 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
C1DP4-201ENST00000455429 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
C1DP4-201ENST00000455429 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
C1DP4-201ENST00000455429 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
C1DP4-201ENST00000455429 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
C1DP4-201ENST00000455429 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
C1DP4-201ENST00000455429 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
C1DP4-201ENST00000455429 HAX1O00165 279 aa10.47□□□□□ -0.73
C1DP4-201ENST00000455429 KLHL34Q8N239 644 aa10.46□□□□□ -0.73
C1DP4-201ENST00000455429 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
C1DP4-201ENST00000455429 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
C1DP4-201ENST00000455429 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
C1DP4-201ENST00000455429 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
C1DP4-201ENST00000455429 NUBP1P53384 320 aa10.36□□□□□ -0.75
C1DP4-201ENST00000455429 RASEFQ8IZ41 740 aa10.35□□□□□ -0.75
C1DP4-201ENST00000455429 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
C1DP4-201ENST00000455429 EVX2Q03828 476 aa10.34□□□□□ -0.75
C1DP4-201ENST00000455429 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
C1DP4-201ENST00000455429 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
C1DP4-201ENST00000455429 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
C1DP4-201ENST00000455429 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
C1DP4-201ENST00000455429 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms