RNA–Protein interactions for RNA: ENST00000455332.6

USP2-202, Transcript of ubiquitin specific peptidase 2, humanhuman

TSL 1 (best) BASIC

Gene USP2, Length 2,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP2-202ENST00000455332 NISCHQ9Y2I1 1504 aa34.01■■■■□ 3.04
USP2-202ENST00000455332 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
USP2-202ENST00000455332 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
USP2-202ENST00000455332 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
USP2-202ENST00000455332 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
USP2-202ENST00000455332 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
USP2-202ENST00000455332 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
USP2-202ENST00000455332 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
USP2-202ENST00000455332 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
USP2-202ENST00000455332 HRCP23327 699 aa28.13■■■□□ 2.09
USP2-202ENST00000455332 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
USP2-202ENST00000455332 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
USP2-202ENST00000455332 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
USP2-202ENST00000455332 EHMT2Q96KQ7 1210 aa27.32■■□□□ 1.96
USP2-202ENST00000455332 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
USP2-202ENST00000455332 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
USP2-202ENST00000455332 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
USP2-202ENST00000455332 ABCC9O60706 1549 aa27.2■■□□□ 1.94
USP2-202ENST00000455332 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
USP2-202ENST00000455332 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
USP2-202ENST00000455332 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
USP2-202ENST00000455332 CECR2Q9BXF3 1484 aa26.76■■□□□ 1.87
USP2-202ENST00000455332 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
USP2-202ENST00000455332 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
USP2-202ENST00000455332 WIZO95785 1651 aa26.48■■□□□ 1.83
USP2-202ENST00000455332 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
USP2-202ENST00000455332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.42■■□□□ 1.82
USP2-202ENST00000455332 NACADO15069 1562 aa26.37■■□□□ 1.81
USP2-202ENST00000455332 CCER1Q8TC90 406 aaPredicted RBP26.27■■□□□ 1.8
USP2-202ENST00000455332 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
USP2-202ENST00000455332 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
USP2-202ENST00000455332 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
USP2-202ENST00000455332 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
USP2-202ENST00000455332 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
USP2-202ENST00000455332 SOGA1O94964 1423 aa25.98■■□□□ 1.75
USP2-202ENST00000455332 UBTFP17480 764 aaKnown RBP25.95■■□□□ 1.74
USP2-202ENST00000455332 CEP162Q5TB80 1403 aa25.92■■□□□ 1.74
USP2-202ENST00000455332 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
USP2-202ENST00000455332 NEUROD1Q13562 356 aa25.87■■□□□ 1.73
USP2-202ENST00000455332 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
USP2-202ENST00000455332 RUSC2Q8N2Y8 1516 aa25.86■■□□□ 1.73
USP2-202ENST00000455332 PABPN1Q86U42 306 aaKnown RBP eCLIP25.86■■□□□ 1.73
USP2-202ENST00000455332 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
USP2-202ENST00000455332 SMARCA4P51532 1647 aa25.82■■□□□ 1.72
USP2-202ENST00000455332 CSRNP3Q8WYN3 585 aa25.81■■□□□ 1.72
USP2-202ENST00000455332 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
USP2-202ENST00000455332 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
USP2-202ENST00000455332 TNIKQ9UKE5 1360 aa25.72■■□□□ 1.71
USP2-202ENST00000455332 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.7
USP2-202ENST00000455332 PELP1Q8IZL8 1130 aaKnown RBP25.67■■□□□ 1.7
USP2-202ENST00000455332 HNRNPUL2Q1KMD3 747 aaKnown RBP25.66■■□□□ 1.7
USP2-202ENST00000455332 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
USP2-202ENST00000455332 UNC13AQ9UPW8 1703 aa25.58■■□□□ 1.69
USP2-202ENST00000455332 YTHDC1Q96MU7 727 aaKnown RBP25.57■■□□□ 1.68
USP2-202ENST00000455332 CENPBP07199 599 aaPredicted RBP25.55■■□□□ 1.68
USP2-202ENST00000455332 GOLGA3Q08378 1498 aa25.52■■□□□ 1.68
USP2-202ENST00000455332 EEA1Q15075 1411 aa25.5■■□□□ 1.67
USP2-202ENST00000455332 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
USP2-202ENST00000455332 CLIP1P30622 1438 aa25.37■■□□□ 1.65
USP2-202ENST00000455332 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
USP2-202ENST00000455332 APLP2Q06481 763 aa25.34■■□□□ 1.65
USP2-202ENST00000455332 MIER1Q8N108 512 aa25.33■■□□□ 1.65
USP2-202ENST00000455332 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
USP2-202ENST00000455332 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
USP2-202ENST00000455332 RAPGEF2Q9Y4G8 1499 aa25.26■■□□□ 1.63
USP2-202ENST00000455332 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.62
USP2-202ENST00000455332 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
USP2-202ENST00000455332 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
USP2-202ENST00000455332 KIF21BO75037 1637 aa25.15■■□□□ 1.62
USP2-202ENST00000455332 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
USP2-202ENST00000455332 KANK4Q5T7N3 995 aaPredicted RBP25.03■■□□□ 1.6
USP2-202ENST00000455332 ITGAEP38570 1179 aa24.96■■□□□ 1.59
USP2-202ENST00000455332 DHX57Q6P158 1386 aaKnown RBP24.87■■□□□ 1.57
USP2-202ENST00000455332 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
USP2-202ENST00000455332 ARAP1Q96P48 1450 aa24.85■■□□□ 1.57
USP2-202ENST00000455332 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
USP2-202ENST00000455332 CUX1P39880 1505 aa24.71■■□□□ 1.55
USP2-202ENST00000455332 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
USP2-202ENST00000455332 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
USP2-202ENST00000455332 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
USP2-202ENST00000455332 CLSPNQ9HAW4 1339 aa24.65■■□□□ 1.54
USP2-202ENST00000455332 CCNB3Q8WWL7 1395 aa24.62■■□□□ 1.53
USP2-202ENST00000455332 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
USP2-202ENST00000455332 KCNH8Q96L42 1107 aa24.59■■□□□ 1.53
USP2-202ENST00000455332 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
USP2-202ENST00000455332 ATP1B4Q9UN42 357 aaPredicted RBP24.58■■□□□ 1.53
USP2-202ENST00000455332 P3H3Q8IVL6 736 aa24.57■■□□□ 1.52
USP2-202ENST00000455332 SUPT16HQ9Y5B9 1047 aaKnown RBP24.55■■□□□ 1.52
USP2-202ENST00000455332 RAB3GAP2Q9H2M9 1393 aa24.51■■□□□ 1.51
USP2-202ENST00000455332 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
USP2-202ENST00000455332 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
USP2-202ENST00000455332 CUX2O14529 1486 aa24.48■■□□□ 1.51
USP2-202ENST00000455332 SIN3AQ96ST3 1273 aa24.48■■□□□ 1.51
USP2-202ENST00000455332 CFTRP13569 1480 aa24.45■■□□□ 1.51
USP2-202ENST00000455332 IGF1RP08069 1367 aa24.44■■□□□ 1.5
USP2-202ENST00000455332 HIRIP3Q9BW71 556 aaPredicted RBP24.44■■□□□ 1.5
USP2-202ENST00000455332 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
USP2-202ENST00000455332 DDX10Q13206 875 aaKnown RBP24.4■■□□□ 1.5
USP2-202ENST00000455332 BCANQ96GW7 911 aa24.37■■□□□ 1.49
USP2-202ENST00000455332 CARMIL1Q5VZK9 1371 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms