RNA–Protein interactions for RNA: ENST00000454981.5

LINC01611-203, Transcript of long intergenic non-protein coding RNA 1611, humanhuman

TSL 3 BASIC

Gene LINC01611, Length 504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01611-203ENST00000454981 AEBP2Q6ZN18 517 aaPredicted RBP33.7■■■□□ 2.99
LINC01611-203ENST00000454981 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
LINC01611-203ENST00000454981 SENP3Q9H4L4 574 aaPredicted RBP28.7■■■□□ 2.18
LINC01611-203ENST00000454981 PHF23Q9BUL5 403 aaPredicted RBP28.46■■■□□ 2.15
LINC01611-203ENST00000454981 FOXD1Q16676 465 aa26.69■■□□□ 1.86
LINC01611-203ENST00000454981 PLPPR3Q6T4P5 718 aa26.14■■□□□ 1.78
LINC01611-203ENST00000454981 PPP6R1Q9UPN7 881 aa25.3■■□□□ 1.64
LINC01611-203ENST00000454981 ADRA2BP18089 450 aa25.27■■□□□ 1.64
LINC01611-203ENST00000454981 PIAS4Q8N2W9 510 aaPredicted RBP25.09■■□□□ 1.61
LINC01611-203ENST00000454981 MSH5O43196 834 aa24.81■■□□□ 1.56
LINC01611-203ENST00000454981 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
LINC01611-203ENST00000454981 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
LINC01611-203ENST00000454981 MAPK8IP2Q13387 824 aaPredicted RBP23.08■■□□□ 1.29
LINC01611-203ENST00000454981 PPP4R3CPQ6ZMV5 832 aa22.97■■□□□ 1.27
LINC01611-203ENST00000454981 DMRT2Q9Y5R5 561 aa22.8■■□□□ 1.24
LINC01611-203ENST00000454981 CNKSR2Q8WXI2 1034 aa22.43■■□□□ 1.18
LINC01611-203ENST00000454981 NCBP3Q53F19 620 aaKnown RBP22.24■■□□□ 1.15
LINC01611-203ENST00000454981 HOXD11P31277 338 aaPredicted RBP22.12■■□□□ 1.13
LINC01611-203ENST00000454981 RNF216Q9NWF9 866 aaPredicted RBP22.1■■□□□ 1.13
LINC01611-203ENST00000454981 DCAF8L1A6NGE4 600 aa21.98■■□□□ 1.11
LINC01611-203ENST00000454981 NPM3O75607 178 aaKnown RBP21.89■■□□□ 1.09
LINC01611-203ENST00000454981 KCNA4P22459 653 aa21.88■■□□□ 1.09
LINC01611-203ENST00000454981 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
LINC01611-203ENST00000454981 RNF39Q9H2S5 420 aa21.19■□□□□ 0.98
LINC01611-203ENST00000454981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
LINC01611-203ENST00000454981 CACNB1Q02641 598 aaPredicted RBP21.08■□□□□ 0.97
LINC01611-203ENST00000454981 C1QBPQ07021 282 aaKnown RBP20.92■□□□□ 0.94
LINC01611-203ENST00000454981 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
LINC01611-203ENST00000454981 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
LINC01611-203ENST00000454981 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
LINC01611-203ENST00000454981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
LINC01611-203ENST00000454981 CAPN15O75808 1086 aa20.31■□□□□ 0.84
LINC01611-203ENST00000454981 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
LINC01611-203ENST00000454981 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
LINC01611-203ENST00000454981 FOXD4L1Q9NU39 408 aa20.28■□□□□ 0.84
LINC01611-203ENST00000454981 MYCNP04198 464 aaPredicted RBP20.25■□□□□ 0.83
LINC01611-203ENST00000454981 APLP2Q06481 763 aa20.22■□□□□ 0.83
LINC01611-203ENST00000454981 SAMD1Q6SPF0 538 aaPredicted RBP20.21■□□□□ 0.83
LINC01611-203ENST00000454981 ZBTB22O15209 634 aa20.1■□□□□ 0.81
LINC01611-203ENST00000454981 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
LINC01611-203ENST00000454981 ZNF219Q9P2Y4 722 aaPredicted RBP20.02■□□□□ 0.8
LINC01611-203ENST00000454981 DSG3P32926 999 aa20.01■□□□□ 0.79
LINC01611-203ENST00000454981 ABCB7O75027 752 aa19.87■□□□□ 0.77
LINC01611-203ENST00000454981 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
LINC01611-203ENST00000454981 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
LINC01611-203ENST00000454981 POLA2Q14181 598 aa19.62■□□□□ 0.73
LINC01611-203ENST00000454981 ATXN8OSP0DMR3 200 aa19.58■□□□□ 0.72
LINC01611-203ENST00000454981 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
LINC01611-203ENST00000454981 ZBTB12Q9Y330 459 aaPredicted RBP19.23■□□□□ 0.67
LINC01611-203ENST00000454981 RBM42Q9BTD8 480 aaKnown RBP19.11■□□□□ 0.65
LINC01611-203ENST00000454981 FBLN2P98095 1184 aa18.99■□□□□ 0.63
LINC01611-203ENST00000454981 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
LINC01611-203ENST00000454981 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
LINC01611-203ENST00000454981 AKT1S1Q96B36 256 aa18.75■□□□□ 0.59
LINC01611-203ENST00000454981 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
LINC01611-203ENST00000454981 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
LINC01611-203ENST00000454981 SPDYE2Q495Y8 402 aa18.67■□□□□ 0.58
LINC01611-203ENST00000454981 REM2Q8IYK8 340 aaPredicted RBP18.58■□□□□ 0.56
LINC01611-203ENST00000454981 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
LINC01611-203ENST00000454981 CHRDL2Q6WN34 429 aa18.51■□□□□ 0.55
LINC01611-203ENST00000454981 POTEHQ6S545 545 aa18.5■□□□□ 0.55
LINC01611-203ENST00000454981 SSUH2Q9Y2M2 353 aa18.44■□□□□ 0.54
LINC01611-203ENST00000454981 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
LINC01611-203ENST00000454981 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
LINC01611-203ENST00000454981 SPDYE1Q8NFV5 336 aaPredicted RBP18.26■□□□□ 0.51
LINC01611-203ENST00000454981 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
LINC01611-203ENST00000454981 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
LINC01611-203ENST00000454981 PIP4P2Q8N4L2 257 aa18.15■□□□□ 0.5
LINC01611-203ENST00000454981 FXR2P51116 673 aaKnown RBP eCLIP18.1■□□□□ 0.49
LINC01611-203ENST00000454981 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
LINC01611-203ENST00000454981 PRKAR2AP13861 404 aaKnown RBP17.93■□□□□ 0.46
LINC01611-203ENST00000454981 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
LINC01611-203ENST00000454981 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
LINC01611-203ENST00000454981 FKBP8Q14318 412 aa17.79■□□□□ 0.44
LINC01611-203ENST00000454981 HAX1O00165 279 aa17.77■□□□□ 0.44
LINC01611-203ENST00000454981 PROM2Q8N271 834 aa17.75■□□□□ 0.43
LINC01611-203ENST00000454981 CREBZFQ9NS37 354 aa17.6■□□□□ 0.41
LINC01611-203ENST00000454981 FARP1Q9Y4F1 1045 aaPredicted RBP17.59■□□□□ 0.41
LINC01611-203ENST00000454981 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
LINC01611-203ENST00000454981 EVX2Q03828 476 aa17.52■□□□□ 0.4
LINC01611-203ENST00000454981 C19orf67A6NJJ6 358 aa17.5■□□□□ 0.39
LINC01611-203ENST00000454981 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
LINC01611-203ENST00000454981 MIER1Q8N108 512 aa17.38■□□□□ 0.37
LINC01611-203ENST00000454981 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC01611-203ENST00000454981 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
LINC01611-203ENST00000454981 MNX1P50219 401 aaPredicted RBP17.32■□□□□ 0.36
LINC01611-203ENST00000454981 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
LINC01611-203ENST00000454981 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
LINC01611-203ENST00000454981 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
LINC01611-203ENST00000454981 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
LINC01611-203ENST00000454981 GABBR2O75899 941 aa17.16■□□□□ 0.34
LINC01611-203ENST00000454981 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
LINC01611-203ENST00000454981 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
LINC01611-203ENST00000454981 TSPYL2Q9H2G4 693 aaPredicted RBP17.07■□□□□ 0.32
LINC01611-203ENST00000454981 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
LINC01611-203ENST00000454981 CLCN6P51797 869 aa17.01■□□□□ 0.31
LINC01611-203ENST00000454981 PHF12Q96QT6 1004 aa17.01■□□□□ 0.31
LINC01611-203ENST00000454981 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
LINC01611-203ENST00000454981 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
LINC01611-203ENST00000454981 NUBP1P53384 320 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms