RNA–Protein interactions for RNA: ENST00000454684.1

AC006042.3-201, humanhuman

BASIC

Gene AC006042.3, Length 1,469 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006042.3-201ENST00000454684 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
AC006042.3-201ENST00000454684 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
AC006042.3-201ENST00000454684 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
AC006042.3-201ENST00000454684 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
AC006042.3-201ENST00000454684 FOXD1Q16676 465 aa20.19■□□□□ 0.82
AC006042.3-201ENST00000454684 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
AC006042.3-201ENST00000454684 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
AC006042.3-201ENST00000454684 MSH5O43196 834 aa19.16■□□□□ 0.66
AC006042.3-201ENST00000454684 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.59
AC006042.3-201ENST00000454684 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
AC006042.3-201ENST00000454684 ADRA2BP18089 450 aa18.59■□□□□ 0.57
AC006042.3-201ENST00000454684 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
AC006042.3-201ENST00000454684 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
AC006042.3-201ENST00000454684 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
AC006042.3-201ENST00000454684 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
AC006042.3-201ENST00000454684 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
AC006042.3-201ENST00000454684 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.23
AC006042.3-201ENST00000454684 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
AC006042.3-201ENST00000454684 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
AC006042.3-201ENST00000454684 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
AC006042.3-201ENST00000454684 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
AC006042.3-201ENST00000454684 RNF39Q9H2S5 420 aa16.27■□□□□ 0.19
AC006042.3-201ENST00000454684 KCNA4P22459 653 aa16.16■□□□□ 0.18
AC006042.3-201ENST00000454684 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
AC006042.3-201ENST00000454684 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
AC006042.3-201ENST00000454684 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
AC006042.3-201ENST00000454684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
AC006042.3-201ENST00000454684 SLC4A2P04920 1241 aa15.33■□□□□ 0.05
AC006042.3-201ENST00000454684 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
AC006042.3-201ENST00000454684 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
AC006042.3-201ENST00000454684 DSG3P32926 999 aa15.08■□□□□ 0.01
AC006042.3-201ENST00000454684 CAPN15O75808 1086 aa15.01□□□□□ -0.01
AC006042.3-201ENST00000454684 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
AC006042.3-201ENST00000454684 POTEHQ6S545 545 aa14.97□□□□□ -0.01
AC006042.3-201ENST00000454684 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
AC006042.3-201ENST00000454684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
AC006042.3-201ENST00000454684 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
AC006042.3-201ENST00000454684 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
AC006042.3-201ENST00000454684 ZBTB22O15209 634 aa14.89□□□□□ -0.03
AC006042.3-201ENST00000454684 APLP2Q06481 763 aa14.89□□□□□ -0.03
AC006042.3-201ENST00000454684 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
AC006042.3-201ENST00000454684 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
AC006042.3-201ENST00000454684 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
AC006042.3-201ENST00000454684 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
AC006042.3-201ENST00000454684 ABCB7O75027 752 aa14.6□□□□□ -0.07
AC006042.3-201ENST00000454684 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
AC006042.3-201ENST00000454684 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
AC006042.3-201ENST00000454684 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
AC006042.3-201ENST00000454684 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
AC006042.3-201ENST00000454684 POLA2Q14181 598 aa14.42□□□□□ -0.1
AC006042.3-201ENST00000454684 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
AC006042.3-201ENST00000454684 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
AC006042.3-201ENST00000454684 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
AC006042.3-201ENST00000454684 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
AC006042.3-201ENST00000454684 FBLN2P98095 1184 aa13.95□□□□□ -0.18
AC006042.3-201ENST00000454684 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
AC006042.3-201ENST00000454684 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
AC006042.3-201ENST00000454684 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
AC006042.3-201ENST00000454684 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
AC006042.3-201ENST00000454684 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
AC006042.3-201ENST00000454684 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
AC006042.3-201ENST00000454684 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
AC006042.3-201ENST00000454684 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC006042.3-201ENST00000454684 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
AC006042.3-201ENST00000454684 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
AC006042.3-201ENST00000454684 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
AC006042.3-201ENST00000454684 HAX1O00165 279 aa13.6□□□□□ -0.23
AC006042.3-201ENST00000454684 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
AC006042.3-201ENST00000454684 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
AC006042.3-201ENST00000454684 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
AC006042.3-201ENST00000454684 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
AC006042.3-201ENST00000454684 EVX2Q03828 476 aa13.36□□□□□ -0.27
AC006042.3-201ENST00000454684 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
AC006042.3-201ENST00000454684 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
AC006042.3-201ENST00000454684 PRR29P0C7W0 189 aa13.21□□□□□ -0.3
AC006042.3-201ENST00000454684 PROM2Q8N271 834 aa13.16□□□□□ -0.3
AC006042.3-201ENST00000454684 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
AC006042.3-201ENST00000454684 FKBP8Q14318 412 aa13.13□□□□□ -0.31
AC006042.3-201ENST00000454684 GABBR2O75899 941 aa13.12□□□□□ -0.31
AC006042.3-201ENST00000454684 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
AC006042.3-201ENST00000454684 CLCN6P51797 869 aa13.03□□□□□ -0.32
AC006042.3-201ENST00000454684 LHX8Q68G74 356 aa13□□□□□ -0.33
AC006042.3-201ENST00000454684 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
AC006042.3-201ENST00000454684 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
AC006042.3-201ENST00000454684 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
AC006042.3-201ENST00000454684 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
AC006042.3-201ENST00000454684 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
AC006042.3-201ENST00000454684 MIER1Q8N108 512 aa12.76□□□□□ -0.37
AC006042.3-201ENST00000454684 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
AC006042.3-201ENST00000454684 NPM1P06748 294 aaKnown RBP eCLIP12.72□□□□□ -0.37
AC006042.3-201ENST00000454684 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
AC006042.3-201ENST00000454684 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
AC006042.3-201ENST00000454684 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.38
AC006042.3-201ENST00000454684 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
AC006042.3-201ENST00000454684 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
AC006042.3-201ENST00000454684 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
AC006042.3-201ENST00000454684 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
AC006042.3-201ENST00000454684 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
AC006042.3-201ENST00000454684 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
AC006042.3-201ENST00000454684 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms