RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
VPS8-212ENST00000452666 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
VPS8-212ENST00000452666 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
VPS8-212ENST00000452666 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
VPS8-212ENST00000452666 FOXD1Q16676 465 aa21.59■■□□□ 1.05
VPS8-212ENST00000452666 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
VPS8-212ENST00000452666 MSH5O43196 834 aa20.49■□□□□ 0.87
VPS8-212ENST00000452666 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
VPS8-212ENST00000452666 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
VPS8-212ENST00000452666 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
VPS8-212ENST00000452666 ADRA2BP18089 450 aa19.66■□□□□ 0.74
VPS8-212ENST00000452666 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
VPS8-212ENST00000452666 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
VPS8-212ENST00000452666 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
VPS8-212ENST00000452666 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
VPS8-212ENST00000452666 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
VPS8-212ENST00000452666 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
VPS8-212ENST00000452666 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
VPS8-212ENST00000452666 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
VPS8-212ENST00000452666 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
VPS8-212ENST00000452666 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
VPS8-212ENST00000452666 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
VPS8-212ENST00000452666 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
VPS8-212ENST00000452666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPS8-212ENST00000452666 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
VPS8-212ENST00000452666 POTEHQ6S545 545 aa16.26■□□□□ 0.19
VPS8-212ENST00000452666 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
VPS8-212ENST00000452666 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
VPS8-212ENST00000452666 CAPN15O75808 1086 aa16.09■□□□□ 0.17
VPS8-212ENST00000452666 DSG3P32926 999 aa16.09■□□□□ 0.17
VPS8-212ENST00000452666 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
VPS8-212ENST00000452666 APLP2Q06481 763 aa15.72■□□□□ 0.11
VPS8-212ENST00000452666 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
VPS8-212ENST00000452666 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
VPS8-212ENST00000452666 ABCB7O75027 752 aa15.64■□□□□ 0.09
VPS8-212ENST00000452666 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
VPS8-212ENST00000452666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
VPS8-212ENST00000452666 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
VPS8-212ENST00000452666 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
VPS8-212ENST00000452666 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
VPS8-212ENST00000452666 KCNA4P22459 653 aa15.41■□□□□ 0.06
VPS8-212ENST00000452666 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
VPS8-212ENST00000452666 POLA2Q14181 598 aa15.14■□□□□ 0.01
VPS8-212ENST00000452666 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
VPS8-212ENST00000452666 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
VPS8-212ENST00000452666 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
VPS8-212ENST00000452666 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
VPS8-212ENST00000452666 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
VPS8-212ENST00000452666 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
VPS8-212ENST00000452666 HAX1O00165 279 aa14.69□□□□□ -0.06
VPS8-212ENST00000452666 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
VPS8-212ENST00000452666 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
VPS8-212ENST00000452666 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
VPS8-212ENST00000452666 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
VPS8-212ENST00000452666 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
VPS8-212ENST00000452666 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
VPS8-212ENST00000452666 EVX2Q03828 476 aa14.38□□□□□ -0.11
VPS8-212ENST00000452666 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
VPS8-212ENST00000452666 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
VPS8-212ENST00000452666 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
VPS8-212ENST00000452666 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
VPS8-212ENST00000452666 FBLN2P98095 1184 aa14.25□□□□□ -0.13
VPS8-212ENST00000452666 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
VPS8-212ENST00000452666 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
VPS8-212ENST00000452666 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
VPS8-212ENST00000452666 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
VPS8-212ENST00000452666 ZBTB22O15209 634 aa14.13□□□□□ -0.15
VPS8-212ENST00000452666 GABBR2O75899 941 aa14.08□□□□□ -0.16
VPS8-212ENST00000452666 LHX8Q68G74 356 aa14.06□□□□□ -0.16
VPS8-212ENST00000452666 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
VPS8-212ENST00000452666 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
VPS8-212ENST00000452666 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
VPS8-212ENST00000452666 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
VPS8-212ENST00000452666 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
VPS8-212ENST00000452666 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPS8-212ENST00000452666 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
VPS8-212ENST00000452666 CLCN6P51797 869 aa13.75□□□□□ -0.21
VPS8-212ENST00000452666 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
VPS8-212ENST00000452666 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
VPS8-212ENST00000452666 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
VPS8-212ENST00000452666 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
VPS8-212ENST00000452666 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
VPS8-212ENST00000452666 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
VPS8-212ENST00000452666 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
VPS8-212ENST00000452666 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
VPS8-212ENST00000452666 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
VPS8-212ENST00000452666 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
VPS8-212ENST00000452666 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
VPS8-212ENST00000452666 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
VPS8-212ENST00000452666 POTEMA6NI47 508 aa13.26□□□□□ -0.29
VPS8-212ENST00000452666 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
VPS8-212ENST00000452666 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
VPS8-212ENST00000452666 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
VPS8-212ENST00000452666 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
VPS8-212ENST00000452666 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
VPS8-212ENST00000452666 METRNQ9UJH8 293 aa13.11□□□□□ -0.31
VPS8-212ENST00000452666 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
VPS8-212ENST00000452666 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
VPS8-212ENST00000452666 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
VPS8-212ENST00000452666 C7P10643 843 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms