RNA–Protein interactions for RNA: ENST00000452576.6

VWDE-203, Transcript of von Willebrand factor D and EGF domains, humanhuman

TSL 1 (best)

Gene VWDE, Length 5,936 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWDE-203ENST00000452576 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
VWDE-203ENST00000452576 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
VWDE-203ENST00000452576 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
VWDE-203ENST00000452576 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
VWDE-203ENST00000452576 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
VWDE-203ENST00000452576 APLP2Q06481 763 aa19.14■□□□□ 0.65
VWDE-203ENST00000452576 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
VWDE-203ENST00000452576 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
VWDE-203ENST00000452576 TTBK1Q5TCY1 1321 aaPredicted RBP18.94■□□□□ 0.62
VWDE-203ENST00000452576 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
VWDE-203ENST00000452576 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
VWDE-203ENST00000452576 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
VWDE-203ENST00000452576 NEFLP07196 543 aa18.6■□□□□ 0.57
VWDE-203ENST00000452576 MYT1Q01538 1121 aa18.59■□□□□ 0.57
VWDE-203ENST00000452576 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
VWDE-203ENST00000452576 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
VWDE-203ENST00000452576 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
VWDE-203ENST00000452576 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
VWDE-203ENST00000452576 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
VWDE-203ENST00000452576 TRIM41Q8WV44 630 aa18.08■□□□□ 0.49
VWDE-203ENST00000452576 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.49
VWDE-203ENST00000452576 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
VWDE-203ENST00000452576 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
VWDE-203ENST00000452576 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
VWDE-203ENST00000452576 CNGB1Q14028 1251 aaPredicted RBP17.88■□□□□ 0.45
VWDE-203ENST00000452576 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
VWDE-203ENST00000452576 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
VWDE-203ENST00000452576 MYT1LQ9UL68 1186 aa17.83■□□□□ 0.45
VWDE-203ENST00000452576 ITGAEP38570 1179 aa17.76■□□□□ 0.43
VWDE-203ENST00000452576 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
VWDE-203ENST00000452576 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
VWDE-203ENST00000452576 HRCP23327 699 aa17.67■□□□□ 0.42
VWDE-203ENST00000452576 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
VWDE-203ENST00000452576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
VWDE-203ENST00000452576 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
VWDE-203ENST00000452576 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
VWDE-203ENST00000452576 BCANQ96GW7 911 aa17.41■□□□□ 0.38
VWDE-203ENST00000452576 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
VWDE-203ENST00000452576 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
VWDE-203ENST00000452576 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
VWDE-203ENST00000452576 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
VWDE-203ENST00000452576 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
VWDE-203ENST00000452576 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
VWDE-203ENST00000452576 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
VWDE-203ENST00000452576 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
VWDE-203ENST00000452576 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
VWDE-203ENST00000452576 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
VWDE-203ENST00000452576 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
VWDE-203ENST00000452576 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
VWDE-203ENST00000452576 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
VWDE-203ENST00000452576 ANP32CO43423 234 aa17.09■□□□□ 0.33
VWDE-203ENST00000452576 ANP32AP39687 249 aaKnown RBP17.04■□□□□ 0.32
VWDE-203ENST00000452576 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
VWDE-203ENST00000452576 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
VWDE-203ENST00000452576 NEFMP07197 916 aa16.94■□□□□ 0.3
VWDE-203ENST00000452576 GLIPR1L2Q4G1C9 344 aa16.89■□□□□ 0.29
VWDE-203ENST00000452576 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
VWDE-203ENST00000452576 ARXQ96QS3 562 aa16.75■□□□□ 0.27
VWDE-203ENST00000452576 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
VWDE-203ENST00000452576 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
VWDE-203ENST00000452576 FKBP8Q14318 412 aa16.69■□□□□ 0.26
VWDE-203ENST00000452576 NBR1Q14596 966 aa16.69■□□□□ 0.26
VWDE-203ENST00000452576 FBLN2P98095 1184 aa16.58■□□□□ 0.25
VWDE-203ENST00000452576 CDK11BP21127 795 aaKnown RBP16.58■□□□□ 0.24
VWDE-203ENST00000452576 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
VWDE-203ENST00000452576 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
VWDE-203ENST00000452576 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
VWDE-203ENST00000452576 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.24
VWDE-203ENST00000452576 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
VWDE-203ENST00000452576 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
VWDE-203ENST00000452576 CCDC136Q96JN2 1154 aa16.48■□□□□ 0.23
VWDE-203ENST00000452576 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
VWDE-203ENST00000452576 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
VWDE-203ENST00000452576 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.22
VWDE-203ENST00000452576 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
VWDE-203ENST00000452576 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
VWDE-203ENST00000452576 ESF1Q9H501 851 aaKnown RBP16.41■□□□□ 0.22
VWDE-203ENST00000452576 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
VWDE-203ENST00000452576 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
VWDE-203ENST00000452576 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
VWDE-203ENST00000452576 TNNT2P45379 298 aaPredicted RBP16.35■□□□□ 0.21
VWDE-203ENST00000452576 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
VWDE-203ENST00000452576 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
VWDE-203ENST00000452576 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
VWDE-203ENST00000452576 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
VWDE-203ENST00000452576 ABCC9O60706 1549 aa16.33■□□□□ 0.21
VWDE-203ENST00000452576 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
VWDE-203ENST00000452576 A0A0G2JS52 829 aa16.3■□□□□ 0.2
VWDE-203ENST00000452576 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
VWDE-203ENST00000452576 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
VWDE-203ENST00000452576 BECN1Q14457 450 aa16.26■□□□□ 0.19
VWDE-203ENST00000452576 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
VWDE-203ENST00000452576 DNTTIP2Q5QJE6 756 aaKnown RBP16.26■□□□□ 0.19
VWDE-203ENST00000452576 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
VWDE-203ENST00000452576 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
VWDE-203ENST00000452576 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
VWDE-203ENST00000452576 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
VWDE-203ENST00000452576 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
VWDE-203ENST00000452576 ZBTB7CA1YPR0 619 aa16.2■□□□□ 0.18
VWDE-203ENST00000452576 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms