RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 AEBP2Q6ZN18 517 aaPredicted RBP32.86■■■□□ 2.85
NUCKS1P1-201ENST00000452067 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
NUCKS1P1-201ENST00000452067 PHF23Q9BUL5 403 aaPredicted RBP28.05■■■□□ 2.08
NUCKS1P1-201ENST00000452067 SENP3Q9H4L4 574 aaPredicted RBP27.87■■■□□ 2.05
NUCKS1P1-201ENST00000452067 FOXD1Q16676 465 aa25.91■■□□□ 1.74
NUCKS1P1-201ENST00000452067 PLPPR3Q6T4P5 718 aa25.8■■□□□ 1.72
NUCKS1P1-201ENST00000452067 PPP6R1Q9UPN7 881 aa24.8■■□□□ 1.56
NUCKS1P1-201ENST00000452067 ADRA2BP18089 450 aa24.75■■□□□ 1.55
NUCKS1P1-201ENST00000452067 PIAS4Q8N2W9 510 aaPredicted RBP24.36■■□□□ 1.49
NUCKS1P1-201ENST00000452067 MSH5O43196 834 aa23.94■■□□□ 1.42
NUCKS1P1-201ENST00000452067 PPP4R3CPQ6ZMV5 832 aa22.72■■□□□ 1.23
NUCKS1P1-201ENST00000452067 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
NUCKS1P1-201ENST00000452067 MAPK8IP2Q13387 824 aaPredicted RBP22.51■■□□□ 1.19
NUCKS1P1-201ENST00000452067 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
NUCKS1P1-201ENST00000452067 POTEDQ86YR6 584 aa22.13■■□□□ 1.13
NUCKS1P1-201ENST00000452067 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
NUCKS1P1-201ENST00000452067 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
NUCKS1P1-201ENST00000452067 KCNA4P22459 653 aa22■■□□□ 1.11
NUCKS1P1-201ENST00000452067 NPM3O75607 178 aaKnown RBP21.76■■□□□ 1.07
NUCKS1P1-201ENST00000452067 RNF216Q9NWF9 866 aaPredicted RBP21.74■■□□□ 1.07
NUCKS1P1-201ENST00000452067 HOXD11P31277 338 aaPredicted RBP21.72■■□□□ 1.07
NUCKS1P1-201ENST00000452067 DCAF8L1A6NGE4 600 aa21.22■□□□□ 0.99
NUCKS1P1-201ENST00000452067 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
NUCKS1P1-201ENST00000452067 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
NUCKS1P1-201ENST00000452067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
NUCKS1P1-201ENST00000452067 SLC4A2P04920 1241 aa20.61■□□□□ 0.89
NUCKS1P1-201ENST00000452067 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
NUCKS1P1-201ENST00000452067 U3KPZ7 1027 aaPredicted RBP20.34■□□□□ 0.85
NUCKS1P1-201ENST00000452067 FOXD4L1Q9NU39 408 aa20.29■□□□□ 0.84
NUCKS1P1-201ENST00000452067 ZBTB22O15209 634 aa20.27■□□□□ 0.84
NUCKS1P1-201ENST00000452067 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
NUCKS1P1-201ENST00000452067 MYCNP04198 464 aaPredicted RBP20.1■□□□□ 0.81
NUCKS1P1-201ENST00000452067 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
NUCKS1P1-201ENST00000452067 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
NUCKS1P1-201ENST00000452067 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
NUCKS1P1-201ENST00000452067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
NUCKS1P1-201ENST00000452067 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
NUCKS1P1-201ENST00000452067 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
NUCKS1P1-201ENST00000452067 SPINK5Q9NQ38 1064 aaPredicted RBP19.82■□□□□ 0.76
NUCKS1P1-201ENST00000452067 APLP2Q06481 763 aa19.79■□□□□ 0.76
NUCKS1P1-201ENST00000452067 CAPN15O75808 1086 aa19.71■□□□□ 0.75
NUCKS1P1-201ENST00000452067 ATXN8OSP0DMR3 200 aa19.6■□□□□ 0.73
NUCKS1P1-201ENST00000452067 ATF5Q9Y2D1 282 aaPredicted RBP19.6■□□□□ 0.73
NUCKS1P1-201ENST00000452067 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.72
NUCKS1P1-201ENST00000452067 TRHP20396 242 aaPredicted RBP19.57■□□□□ 0.72
NUCKS1P1-201ENST00000452067 DSG3P32926 999 aa19.46■□□□□ 0.71
NUCKS1P1-201ENST00000452067 ABCB7O75027 752 aa19.33■□□□□ 0.68
NUCKS1P1-201ENST00000452067 POLA2Q14181 598 aa19.23■□□□□ 0.67
NUCKS1P1-201ENST00000452067 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
NUCKS1P1-201ENST00000452067 MKRN4PQ13434 485 aaPredicted RBP18.75■□□□□ 0.59
NUCKS1P1-201ENST00000452067 FBLN2P98095 1184 aa18.73■□□□□ 0.59
NUCKS1P1-201ENST00000452067 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
NUCKS1P1-201ENST00000452067 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
NUCKS1P1-201ENST00000452067 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
NUCKS1P1-201ENST00000452067 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
NUCKS1P1-201ENST00000452067 SPDYE2Q495Y8 402 aa18.39■□□□□ 0.53
NUCKS1P1-201ENST00000452067 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
NUCKS1P1-201ENST00000452067 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
NUCKS1P1-201ENST00000452067 SSUH2Q9Y2M2 353 aa18.25■□□□□ 0.51
NUCKS1P1-201ENST00000452067 SPDYE4A6NLX3 237 aa18.2■□□□□ 0.5
NUCKS1P1-201ENST00000452067 REM2Q8IYK8 340 aaPredicted RBP18.1■□□□□ 0.49
NUCKS1P1-201ENST00000452067 FKBP8Q14318 412 aa18.04■□□□□ 0.48
NUCKS1P1-201ENST00000452067 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
NUCKS1P1-201ENST00000452067 PROM2Q8N271 834 aa17.93■□□□□ 0.46
NUCKS1P1-201ENST00000452067 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
NUCKS1P1-201ENST00000452067 SPDYE1Q8NFV5 336 aaPredicted RBP17.87■□□□□ 0.45
NUCKS1P1-201ENST00000452067 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
NUCKS1P1-201ENST00000452067 CLEC11AQ9Y240 323 aa17.78■□□□□ 0.44
NUCKS1P1-201ENST00000452067 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
NUCKS1P1-201ENST00000452067 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
NUCKS1P1-201ENST00000452067 FXR2P51116 673 aaKnown RBP eCLIP17.6■□□□□ 0.41
NUCKS1P1-201ENST00000452067 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
NUCKS1P1-201ENST00000452067 POTEHQ6S545 545 aa17.48■□□□□ 0.39
NUCKS1P1-201ENST00000452067 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
NUCKS1P1-201ENST00000452067 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
NUCKS1P1-201ENST00000452067 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
NUCKS1P1-201ENST00000452067 CREBZFQ9NS37 354 aa17.38■□□□□ 0.37
NUCKS1P1-201ENST00000452067 MIER1Q8N108 512 aa17.25■□□□□ 0.35
NUCKS1P1-201ENST00000452067 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
NUCKS1P1-201ENST00000452067 FARP1Q9Y4F1 1045 aaPredicted RBP17.22■□□□□ 0.35
NUCKS1P1-201ENST00000452067 MNX1P50219 401 aaPredicted RBP17.2■□□□□ 0.34
NUCKS1P1-201ENST00000452067 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
NUCKS1P1-201ENST00000452067 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
NUCKS1P1-201ENST00000452067 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
NUCKS1P1-201ENST00000452067 HAX1O00165 279 aa17.02■□□□□ 0.32
NUCKS1P1-201ENST00000452067 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
NUCKS1P1-201ENST00000452067 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
NUCKS1P1-201ENST00000452067 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
NUCKS1P1-201ENST00000452067 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
NUCKS1P1-201ENST00000452067 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
NUCKS1P1-201ENST00000452067 EVX2Q03828 476 aa16.92■□□□□ 0.3
NUCKS1P1-201ENST00000452067 NUBP1P53384 320 aa16.89■□□□□ 0.29
NUCKS1P1-201ENST00000452067 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
NUCKS1P1-201ENST00000452067 SPOCK2Q92563 424 aa16.8■□□□□ 0.28
NUCKS1P1-201ENST00000452067 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
NUCKS1P1-201ENST00000452067 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
NUCKS1P1-201ENST00000452067 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
NUCKS1P1-201ENST00000452067 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
NUCKS1P1-201ENST00000452067 ZNF579Q8NAF0 562 aaKnown RBP16.72■□□□□ 0.27
NUCKS1P1-201ENST00000452067 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms