RNA–Protein interactions for RNA: ENST00000452012.1

UBE2E1-205, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 1,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-205ENST00000452012 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
UBE2E1-205ENST00000452012 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
UBE2E1-205ENST00000452012 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
UBE2E1-205ENST00000452012 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
UBE2E1-205ENST00000452012 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
UBE2E1-205ENST00000452012 FOXD1Q16676 465 aa22.07■■□□□ 1.12
UBE2E1-205ENST00000452012 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
UBE2E1-205ENST00000452012 ADRA2BP18089 450 aa21.52■■□□□ 1.04
UBE2E1-205ENST00000452012 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
UBE2E1-205ENST00000452012 MSH5O43196 834 aa20.13■□□□□ 0.81
UBE2E1-205ENST00000452012 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
UBE2E1-205ENST00000452012 KCNA4P22459 653 aa19.98■□□□□ 0.79
UBE2E1-205ENST00000452012 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
UBE2E1-205ENST00000452012 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
UBE2E1-205ENST00000452012 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
UBE2E1-205ENST00000452012 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
UBE2E1-205ENST00000452012 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
UBE2E1-205ENST00000452012 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
UBE2E1-205ENST00000452012 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
UBE2E1-205ENST00000452012 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
UBE2E1-205ENST00000452012 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
UBE2E1-205ENST00000452012 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
UBE2E1-205ENST00000452012 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
UBE2E1-205ENST00000452012 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
UBE2E1-205ENST00000452012 ZBTB22O15209 634 aa18.45■□□□□ 0.54
UBE2E1-205ENST00000452012 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
UBE2E1-205ENST00000452012 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
UBE2E1-205ENST00000452012 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
UBE2E1-205ENST00000452012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
UBE2E1-205ENST00000452012 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
UBE2E1-205ENST00000452012 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
UBE2E1-205ENST00000452012 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
UBE2E1-205ENST00000452012 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
UBE2E1-205ENST00000452012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
UBE2E1-205ENST00000452012 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
UBE2E1-205ENST00000452012 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
UBE2E1-205ENST00000452012 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
UBE2E1-205ENST00000452012 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
UBE2E1-205ENST00000452012 APLP2Q06481 763 aa17.13■□□□□ 0.33
UBE2E1-205ENST00000452012 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
UBE2E1-205ENST00000452012 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
UBE2E1-205ENST00000452012 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
UBE2E1-205ENST00000452012 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
UBE2E1-205ENST00000452012 CAPN15O75808 1086 aa16.95■□□□□ 0.3
UBE2E1-205ENST00000452012 POLA2Q14181 598 aa16.77■□□□□ 0.28
UBE2E1-205ENST00000452012 FKBP8Q14318 412 aa16.73■□□□□ 0.27
UBE2E1-205ENST00000452012 ABCB7O75027 752 aa16.72■□□□□ 0.27
UBE2E1-205ENST00000452012 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
UBE2E1-205ENST00000452012 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
UBE2E1-205ENST00000452012 DSG3P32926 999 aa16.62■□□□□ 0.25
UBE2E1-205ENST00000452012 FBLN2P98095 1184 aa16.52■□□□□ 0.24
UBE2E1-205ENST00000452012 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
UBE2E1-205ENST00000452012 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
UBE2E1-205ENST00000452012 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
UBE2E1-205ENST00000452012 PROM2Q8N271 834 aa16.17■□□□□ 0.18
UBE2E1-205ENST00000452012 ZNF692Q9BU19 519 aaPredicted RBP16.06■□□□□ 0.16
UBE2E1-205ENST00000452012 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
UBE2E1-205ENST00000452012 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
UBE2E1-205ENST00000452012 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
UBE2E1-205ENST00000452012 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
UBE2E1-205ENST00000452012 FBXO3Q9UK99 471 aa15.94■□□□□ 0.14
UBE2E1-205ENST00000452012 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
UBE2E1-205ENST00000452012 RTN4Q9NQC3 1192 aaKnown RBP15.82■□□□□ 0.12
UBE2E1-205ENST00000452012 VASPP50552 380 aaPredicted RBP15.8■□□□□ 0.12
UBE2E1-205ENST00000452012 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
UBE2E1-205ENST00000452012 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
UBE2E1-205ENST00000452012 IFNLR1Q8IU57 520 aaPredicted RBP15.65■□□□□ 0.1
UBE2E1-205ENST00000452012 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
UBE2E1-205ENST00000452012 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
UBE2E1-205ENST00000452012 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
UBE2E1-205ENST00000452012 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
UBE2E1-205ENST00000452012 PLCD3Q8N3E9 789 aa15.48■□□□□ 0.07
UBE2E1-205ENST00000452012 MIER1Q8N108 512 aa15.47■□□□□ 0.07
UBE2E1-205ENST00000452012 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
UBE2E1-205ENST00000452012 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
UBE2E1-205ENST00000452012 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
UBE2E1-205ENST00000452012 SPOCK2Q92563 424 aa15.34■□□□□ 0.05
UBE2E1-205ENST00000452012 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
UBE2E1-205ENST00000452012 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
UBE2E1-205ENST00000452012 CREBZFQ9NS37 354 aa15.27■□□□□ 0.04
UBE2E1-205ENST00000452012 PKD2Q13563 968 aa15.25■□□□□ 0.03
UBE2E1-205ENST00000452012 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
UBE2E1-205ENST00000452012 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
UBE2E1-205ENST00000452012 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
UBE2E1-205ENST00000452012 NUBP1P53384 320 aa15.09■□□□□ 0.01
UBE2E1-205ENST00000452012 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
UBE2E1-205ENST00000452012 ECM2O94769 699 aaPredicted RBP15.04■□□□□ -0
UBE2E1-205ENST00000452012 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
UBE2E1-205ENST00000452012 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
UBE2E1-205ENST00000452012 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
UBE2E1-205ENST00000452012 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
UBE2E1-205ENST00000452012 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
UBE2E1-205ENST00000452012 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
UBE2E1-205ENST00000452012 RGL2O15211 777 aa14.94□□□□□ -0.02
UBE2E1-205ENST00000452012 GSE1Q14687 1217 aa14.93□□□□□ -0.02
UBE2E1-205ENST00000452012 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
UBE2E1-205ENST00000452012 PIP4P2Q8N4L2 257 aa14.93□□□□□ -0.02
UBE2E1-205ENST00000452012 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
UBE2E1-205ENST00000452012 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE2E1-205ENST00000452012 FAM212AQ96EL1 285 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms