RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
GTF3C3-207ENST00000451088 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
GTF3C3-207ENST00000451088 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
GTF3C3-207ENST00000451088 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
GTF3C3-207ENST00000451088 FOXD1Q16676 465 aa20.68■□□□□ 0.9
GTF3C3-207ENST00000451088 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
GTF3C3-207ENST00000451088 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
GTF3C3-207ENST00000451088 ADRA2BP18089 450 aa19.62■□□□□ 0.73
GTF3C3-207ENST00000451088 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
GTF3C3-207ENST00000451088 MSH5O43196 834 aa19.19■□□□□ 0.66
GTF3C3-207ENST00000451088 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
GTF3C3-207ENST00000451088 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
GTF3C3-207ENST00000451088 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
GTF3C3-207ENST00000451088 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
GTF3C3-207ENST00000451088 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
GTF3C3-207ENST00000451088 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
GTF3C3-207ENST00000451088 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
GTF3C3-207ENST00000451088 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
GTF3C3-207ENST00000451088 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
GTF3C3-207ENST00000451088 KCNA4P22459 653 aa17.19■□□□□ 0.34
GTF3C3-207ENST00000451088 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
GTF3C3-207ENST00000451088 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
GTF3C3-207ENST00000451088 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
GTF3C3-207ENST00000451088 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
GTF3C3-207ENST00000451088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.216e-8■■■■□ 21.3
GTF3C3-207ENST00000451088 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
GTF3C3-207ENST00000451088 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
GTF3C3-207ENST00000451088 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
GTF3C3-207ENST00000451088 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
GTF3C3-207ENST00000451088 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
GTF3C3-207ENST00000451088 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
GTF3C3-207ENST00000451088 ZBTB22O15209 634 aa15.83■□□□□ 0.12
GTF3C3-207ENST00000451088 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
GTF3C3-207ENST00000451088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
GTF3C3-207ENST00000451088 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
GTF3C3-207ENST00000451088 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
GTF3C3-207ENST00000451088 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
GTF3C3-207ENST00000451088 APLP2Q06481 763 aa15.71■□□□□ 0.11
GTF3C3-207ENST00000451088 CAPN15O75808 1086 aa15.66■□□□□ 0.1
GTF3C3-207ENST00000451088 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
GTF3C3-207ENST00000451088 DSG3P32926 999 aa15.52■□□□□ 0.08
GTF3C3-207ENST00000451088 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
GTF3C3-207ENST00000451088 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
GTF3C3-207ENST00000451088 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
GTF3C3-207ENST00000451088 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
GTF3C3-207ENST00000451088 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
GTF3C3-207ENST00000451088 ABCB7O75027 752 aa15.33■□□□□ 0.04
GTF3C3-207ENST00000451088 POLA2Q14181 598 aa15.23■□□□□ 0.03
GTF3C3-207ENST00000451088 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
GTF3C3-207ENST00000451088 FBLN2P98095 1184 aa14.78□□□□□ -0.04
GTF3C3-207ENST00000451088 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
GTF3C3-207ENST00000451088 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
GTF3C3-207ENST00000451088 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
GTF3C3-207ENST00000451088 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
GTF3C3-207ENST00000451088 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
GTF3C3-207ENST00000451088 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
GTF3C3-207ENST00000451088 AKT1S1Q96B36 256 aa14.55□□□□□ -0.08
GTF3C3-207ENST00000451088 SSUH2Q9Y2M2 353 aa14.43□□□□□ -0.1
GTF3C3-207ENST00000451088 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
GTF3C3-207ENST00000451088 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
GTF3C3-207ENST00000451088 CHRDL2Q6WN34 429 aa14.28□□□□□ -0.12
GTF3C3-207ENST00000451088 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
GTF3C3-207ENST00000451088 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
GTF3C3-207ENST00000451088 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
GTF3C3-207ENST00000451088 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
GTF3C3-207ENST00000451088 POTEHQ6S545 545 aa14.16□□□□□ -0.14
GTF3C3-207ENST00000451088 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
GTF3C3-207ENST00000451088 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
GTF3C3-207ENST00000451088 PROM2Q8N271 834 aa14.06□□□□□ -0.16
GTF3C3-207ENST00000451088 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
GTF3C3-207ENST00000451088 FKBP8Q14318 412 aa13.98□□□□□ -0.17
GTF3C3-207ENST00000451088 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
GTF3C3-207ENST00000451088 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
GTF3C3-207ENST00000451088 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
GTF3C3-207ENST00000451088 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
GTF3C3-207ENST00000451088 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
GTF3C3-207ENST00000451088 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
GTF3C3-207ENST00000451088 HAX1O00165 279 aa13.62□□□□□ -0.23
GTF3C3-207ENST00000451088 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
GTF3C3-207ENST00000451088 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
GTF3C3-207ENST00000451088 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
GTF3C3-207ENST00000451088 EVX2Q03828 476 aa13.53□□□□□ -0.24
GTF3C3-207ENST00000451088 MIER1Q8N108 512 aa13.53□□□□□ -0.24
GTF3C3-207ENST00000451088 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
GTF3C3-207ENST00000451088 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
GTF3C3-207ENST00000451088 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
GTF3C3-207ENST00000451088 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
GTF3C3-207ENST00000451088 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
GTF3C3-207ENST00000451088 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
GTF3C3-207ENST00000451088 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
GTF3C3-207ENST00000451088 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
GTF3C3-207ENST00000451088 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-207ENST00000451088 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
GTF3C3-207ENST00000451088 NUBP1P53384 320 aa13.27□□□□□ -0.29
GTF3C3-207ENST00000451088 GABBR2O75899 941 aa13.25□□□□□ -0.29
GTF3C3-207ENST00000451088 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
GTF3C3-207ENST00000451088 CLCN6P51797 869 aa13.24□□□□□ -0.29
GTF3C3-207ENST00000451088 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
GTF3C3-207ENST00000451088 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
GTF3C3-207ENST00000451088 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms