RNA–Protein interactions for RNA: ENST00000450640.1

LINC01729-201, Transcript of long intergenic non-protein coding RNA 1729, humanhuman

TSL 3 BASIC

Gene LINC01729, Length 358 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01729-201ENST00000450640 AEBP2Q6ZN18 517 aaPredicted RBP19.49■□□□□ 0.71
LINC01729-201ENST00000450640 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
LINC01729-201ENST00000450640 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
LINC01729-201ENST00000450640 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
LINC01729-201ENST00000450640 FOXD1Q16676 465 aa15.51■□□□□ 0.07
LINC01729-201ENST00000450640 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
LINC01729-201ENST00000450640 MSH5O43196 834 aa14.54□□□□□ -0.08
LINC01729-201ENST00000450640 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
LINC01729-201ENST00000450640 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
LINC01729-201ENST00000450640 ADRA2BP18089 450 aa14.39□□□□□ -0.11
LINC01729-201ENST00000450640 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
LINC01729-201ENST00000450640 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
LINC01729-201ENST00000450640 ABCC9O60706 1549 aa13.34□□□□□ -0.27
LINC01729-201ENST00000450640 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
LINC01729-201ENST00000450640 MAPK8IP2Q13387 824 aaPredicted RBP13.23□□□□□ -0.29
LINC01729-201ENST00000450640 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
LINC01729-201ENST00000450640 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
LINC01729-201ENST00000450640 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
LINC01729-201ENST00000450640 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
LINC01729-201ENST00000450640 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
LINC01729-201ENST00000450640 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
LINC01729-201ENST00000450640 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
LINC01729-201ENST00000450640 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
LINC01729-201ENST00000450640 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
LINC01729-201ENST00000450640 KCNA4P22459 653 aa12.5□□□□□ -0.41
LINC01729-201ENST00000450640 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
LINC01729-201ENST00000450640 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
LINC01729-201ENST00000450640 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
LINC01729-201ENST00000450640 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC01729-201ENST00000450640 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
LINC01729-201ENST00000450640 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
LINC01729-201ENST00000450640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC01729-201ENST00000450640 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
LINC01729-201ENST00000450640 RB1CC1Q8TDY2 1594 aa11.98□□□□□ -0.49
LINC01729-201ENST00000450640 CC2D2AQ9P2K1 1620 aa11.91□□□□□ -0.5
LINC01729-201ENST00000450640 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
LINC01729-201ENST00000450640 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
LINC01729-201ENST00000450640 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
LINC01729-201ENST00000450640 UNC13AQ9UPW8 1703 aa11.84□□□□□ -0.51
LINC01729-201ENST00000450640 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
LINC01729-201ENST00000450640 CUX2O14529 1486 aa11.81□□□□□ -0.52
LINC01729-201ENST00000450640 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
LINC01729-201ENST00000450640 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
LINC01729-201ENST00000450640 SPINK5Q9NQ38 1064 aaPredicted RBP11.67□□□□□ -0.54
LINC01729-201ENST00000450640 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
LINC01729-201ENST00000450640 CAPN15O75808 1086 aa11.65□□□□□ -0.54
LINC01729-201ENST00000450640 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
LINC01729-201ENST00000450640 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
LINC01729-201ENST00000450640 DSG3P32926 999 aa11.59□□□□□ -0.55
LINC01729-201ENST00000450640 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
LINC01729-201ENST00000450640 ZBTB22O15209 634 aa11.54□□□□□ -0.56
LINC01729-201ENST00000450640 EIF4G1Q04637 1599 aaKnown RBP11.53□□□□□ -0.56
LINC01729-201ENST00000450640 NACADO15069 1562 aa11.52□□□□□ -0.57
LINC01729-201ENST00000450640 APLP2Q06481 763 aa11.46□□□□□ -0.57
LINC01729-201ENST00000450640 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
LINC01729-201ENST00000450640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
LINC01729-201ENST00000450640 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
LINC01729-201ENST00000450640 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
LINC01729-201ENST00000450640 ABCB7O75027 752 aa11.4□□□□□ -0.58
LINC01729-201ENST00000450640 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
LINC01729-201ENST00000450640 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
LINC01729-201ENST00000450640 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
LINC01729-201ENST00000450640 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
LINC01729-201ENST00000450640 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
LINC01729-201ENST00000450640 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
LINC01729-201ENST00000450640 POTEHQ6S545 545 aa11.2□□□□□ -0.62
LINC01729-201ENST00000450640 SHROOM4Q9ULL8 1493 aa11.17□□□□□ -0.62
LINC01729-201ENST00000450640 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
LINC01729-201ENST00000450640 BAZ1AQ9NRL2 1556 aaPredicted RBP11.15□□□□□ -0.62
LINC01729-201ENST00000450640 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
LINC01729-201ENST00000450640 POLA2Q14181 598 aa11.1□□□□□ -0.63
LINC01729-201ENST00000450640 NESP48681 1621 aa11.09□□□□□ -0.63
LINC01729-201ENST00000450640 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
LINC01729-201ENST00000450640 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
LINC01729-201ENST00000450640 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
LINC01729-201ENST00000450640 LMTK3Q96Q04 1460 aa11.05□□□□□ -0.64
LINC01729-201ENST00000450640 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
LINC01729-201ENST00000450640 SCRIBQ14160 1630 aa11□□□□□ -0.65
LINC01729-201ENST00000450640 ARHGEF11O15085 1522 aa10.99□□□□□ -0.65
LINC01729-201ENST00000450640 SOCS7O14512 581 aa10.98□□□□□ -0.65
LINC01729-201ENST00000450640 ILDR2Q71H61 639 aa10.93□□□□□ -0.66
LINC01729-201ENST00000450640 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
LINC01729-201ENST00000450640 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
LINC01729-201ENST00000450640 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
LINC01729-201ENST00000450640 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
LINC01729-201ENST00000450640 FBXO41Q8TF61 875 aa10.85□□□□□ -0.67
LINC01729-201ENST00000450640 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
LINC01729-201ENST00000450640 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
LINC01729-201ENST00000450640 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
LINC01729-201ENST00000450640 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
LINC01729-201ENST00000450640 KDM4FA0A1W2PPD8 638 aa10.74□□□□□ -0.69
LINC01729-201ENST00000450640 ERCC6L2Q5T890 1561 aa10.72□□□□□ -0.69
LINC01729-201ENST00000450640 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
LINC01729-201ENST00000450640 HECW2Q9P2P5 1572 aa10.67□□□□□ -0.7
LINC01729-201ENST00000450640 MRC2Q9UBG0 1479 aa10.66□□□□□ -0.7
LINC01729-201ENST00000450640 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.71
LINC01729-201ENST00000450640 WDR62O43379 1518 aa10.63□□□□□ -0.71
LINC01729-201ENST00000450640 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
LINC01729-201ENST00000450640 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
LINC01729-201ENST00000450640 PITPNM1O00562 1244 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms