RNA–Protein interactions for RNA: ENST00000450294.3

LINC01828-202, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 955 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-202ENST00000450294 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
LINC01828-202ENST00000450294 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
LINC01828-202ENST00000450294 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
LINC01828-202ENST00000450294 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
LINC01828-202ENST00000450294 FOXD1Q16676 465 aa24.03■■□□□ 1.44
LINC01828-202ENST00000450294 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
LINC01828-202ENST00000450294 MSH5O43196 834 aa22.73■■□□□ 1.23
LINC01828-202ENST00000450294 PIAS4Q8N2W9 510 aaPredicted RBP22.59■■□□□ 1.21
LINC01828-202ENST00000450294 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
LINC01828-202ENST00000450294 ADRA2BP18089 450 aa22.37■■□□□ 1.17
LINC01828-202ENST00000450294 POTEDQ86YR6 584 aa21.86■■□□□ 1.09
LINC01828-202ENST00000450294 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
LINC01828-202ENST00000450294 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
LINC01828-202ENST00000450294 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
LINC01828-202ENST00000450294 PPP4R3CPQ6ZMV5 832 aa20.24■□□□□ 0.83
LINC01828-202ENST00000450294 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
LINC01828-202ENST00000450294 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
LINC01828-202ENST00000450294 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
LINC01828-202ENST00000450294 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
LINC01828-202ENST00000450294 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
LINC01828-202ENST00000450294 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
LINC01828-202ENST00000450294 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
LINC01828-202ENST00000450294 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
LINC01828-202ENST00000450294 NPM3O75607 178 aaKnown RBP19.15■□□□□ 0.66
LINC01828-202ENST00000450294 C1QBPQ07021 282 aaKnown RBP19.1■□□□□ 0.65
LINC01828-202ENST00000450294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.62
LINC01828-202ENST00000450294 KCNA4P22459 653 aa18.77■□□□□ 0.6
LINC01828-202ENST00000450294 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
LINC01828-202ENST00000450294 APLP2Q06481 763 aa18.33■□□□□ 0.52
LINC01828-202ENST00000450294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
LINC01828-202ENST00000450294 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
LINC01828-202ENST00000450294 CAPN15O75808 1086 aa18.21■□□□□ 0.51
LINC01828-202ENST00000450294 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
LINC01828-202ENST00000450294 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
LINC01828-202ENST00000450294 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
LINC01828-202ENST00000450294 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
LINC01828-202ENST00000450294 DSG3P32926 999 aa18.01■□□□□ 0.47
LINC01828-202ENST00000450294 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
LINC01828-202ENST00000450294 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
LINC01828-202ENST00000450294 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
LINC01828-202ENST00000450294 ABCB7O75027 752 aa17.68■□□□□ 0.42
LINC01828-202ENST00000450294 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
LINC01828-202ENST00000450294 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
LINC01828-202ENST00000450294 POLA2Q14181 598 aa17.41■□□□□ 0.38
LINC01828-202ENST00000450294 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
LINC01828-202ENST00000450294 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
LINC01828-202ENST00000450294 POTEHQ6S545 545 aa17.21■□□□□ 0.35
LINC01828-202ENST00000450294 ZBTB22O15209 634 aa17.15■□□□□ 0.34
LINC01828-202ENST00000450294 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
LINC01828-202ENST00000450294 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
LINC01828-202ENST00000450294 FBLN2P98095 1184 aa16.86■□□□□ 0.29
LINC01828-202ENST00000450294 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
LINC01828-202ENST00000450294 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
LINC01828-202ENST00000450294 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
LINC01828-202ENST00000450294 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
LINC01828-202ENST00000450294 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
LINC01828-202ENST00000450294 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
LINC01828-202ENST00000450294 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
LINC01828-202ENST00000450294 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
LINC01828-202ENST00000450294 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
LINC01828-202ENST00000450294 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
LINC01828-202ENST00000450294 PIP4P2Q8N4L2 257 aa16.4■□□□□ 0.22
LINC01828-202ENST00000450294 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
LINC01828-202ENST00000450294 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01828-202ENST00000450294 SSUH2Q9Y2M2 353 aa16.35■□□□□ 0.21
LINC01828-202ENST00000450294 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
LINC01828-202ENST00000450294 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
LINC01828-202ENST00000450294 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
LINC01828-202ENST00000450294 HAX1O00165 279 aa16.17■□□□□ 0.18
LINC01828-202ENST00000450294 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC01828-202ENST00000450294 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
LINC01828-202ENST00000450294 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
LINC01828-202ENST00000450294 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
LINC01828-202ENST00000450294 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
LINC01828-202ENST00000450294 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
LINC01828-202ENST00000450294 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
LINC01828-202ENST00000450294 EVX2Q03828 476 aa15.71■□□□□ 0.11
LINC01828-202ENST00000450294 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
LINC01828-202ENST00000450294 CLCN6P51797 869 aa15.66■□□□□ 0.1
LINC01828-202ENST00000450294 CD44P16070 742 aaKnown RBP15.62■□□□□ 0.09
LINC01828-202ENST00000450294 GABBR2O75899 941 aa15.55■□□□□ 0.08
LINC01828-202ENST00000450294 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
LINC01828-202ENST00000450294 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
LINC01828-202ENST00000450294 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01828-202ENST00000450294 PROM2Q8N271 834 aa15.42■□□□□ 0.06
LINC01828-202ENST00000450294 ZNF579Q8NAF0 562 aaKnown RBP15.39■□□□□ 0.05
LINC01828-202ENST00000450294 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
LINC01828-202ENST00000450294 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
LINC01828-202ENST00000450294 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
LINC01828-202ENST00000450294 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
LINC01828-202ENST00000450294 LHX8Q68G74 356 aa15.17■□□□□ 0.02
LINC01828-202ENST00000450294 MIER1Q8N108 512 aa15.13■□□□□ 0.01
LINC01828-202ENST00000450294 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
LINC01828-202ENST00000450294 POTEIP0CG38 1075 aa15.08■□□□□ 0
LINC01828-202ENST00000450294 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
LINC01828-202ENST00000450294 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
LINC01828-202ENST00000450294 PHF12Q96QT6 1004 aa15.07■□□□□ 0
LINC01828-202ENST00000450294 FKBP8Q14318 412 aa15.05■□□□□ -0
LINC01828-202ENST00000450294 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
LINC01828-202ENST00000450294 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms