RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
AC007879.3-202ENST00000448786 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
AC007879.3-202ENST00000448786 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
AC007879.3-202ENST00000448786 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
AC007879.3-202ENST00000448786 FOXD1Q16676 465 aa18.32■□□□□ 0.52
AC007879.3-202ENST00000448786 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
AC007879.3-202ENST00000448786 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
AC007879.3-202ENST00000448786 MSH5O43196 834 aa17.28■□□□□ 0.36
AC007879.3-202ENST00000448786 ADRA2BP18089 450 aa17.04■□□□□ 0.32
AC007879.3-202ENST00000448786 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
AC007879.3-202ENST00000448786 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
AC007879.3-202ENST00000448786 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
AC007879.3-202ENST00000448786 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
AC007879.3-202ENST00000448786 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
AC007879.3-202ENST00000448786 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
AC007879.3-202ENST00000448786 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
AC007879.3-202ENST00000448786 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
AC007879.3-202ENST00000448786 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
AC007879.3-202ENST00000448786 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
AC007879.3-202ENST00000448786 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
AC007879.3-202ENST00000448786 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
AC007879.3-202ENST00000448786 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
AC007879.3-202ENST00000448786 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
AC007879.3-202ENST00000448786 KCNA4P22459 653 aa14.65□□□□□ -0.06
AC007879.3-202ENST00000448786 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
AC007879.3-202ENST00000448786 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
AC007879.3-202ENST00000448786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
AC007879.3-202ENST00000448786 POTEHQ6S545 545 aa14.09□□□□□ -0.15
AC007879.3-202ENST00000448786 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
AC007879.3-202ENST00000448786 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
AC007879.3-202ENST00000448786 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
AC007879.3-202ENST00000448786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
AC007879.3-202ENST00000448786 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
AC007879.3-202ENST00000448786 APLP2Q06481 763 aa13.77□□□□□ -0.21
AC007879.3-202ENST00000448786 CAPN15O75808 1086 aa13.75□□□□□ -0.21
AC007879.3-202ENST00000448786 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
AC007879.3-202ENST00000448786 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
AC007879.3-202ENST00000448786 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
AC007879.3-202ENST00000448786 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
AC007879.3-202ENST00000448786 DSG3P32926 999 aa13.59□□□□□ -0.23
AC007879.3-202ENST00000448786 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
AC007879.3-202ENST00000448786 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
AC007879.3-202ENST00000448786 ZBTB22O15209 634 aa13.41□□□□□ -0.26
AC007879.3-202ENST00000448786 ABCB7O75027 752 aa13.41□□□□□ -0.26
AC007879.3-202ENST00000448786 POLA2Q14181 598 aa13.25□□□□□ -0.29
AC007879.3-202ENST00000448786 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
AC007879.3-202ENST00000448786 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
AC007879.3-202ENST00000448786 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
AC007879.3-202ENST00000448786 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
AC007879.3-202ENST00000448786 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
AC007879.3-202ENST00000448786 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
AC007879.3-202ENST00000448786 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
AC007879.3-202ENST00000448786 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
AC007879.3-202ENST00000448786 FBLN2P98095 1184 aa12.85□□□□□ -0.35
AC007879.3-202ENST00000448786 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
AC007879.3-202ENST00000448786 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
AC007879.3-202ENST00000448786 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
AC007879.3-202ENST00000448786 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
AC007879.3-202ENST00000448786 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
AC007879.3-202ENST00000448786 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
AC007879.3-202ENST00000448786 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
AC007879.3-202ENST00000448786 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
AC007879.3-202ENST00000448786 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
AC007879.3-202ENST00000448786 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
AC007879.3-202ENST00000448786 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
AC007879.3-202ENST00000448786 HAX1O00165 279 aa12.41□□□□□ -0.42
AC007879.3-202ENST00000448786 EVX2Q03828 476 aa12.38□□□□□ -0.43
AC007879.3-202ENST00000448786 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
AC007879.3-202ENST00000448786 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
AC007879.3-202ENST00000448786 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
AC007879.3-202ENST00000448786 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
AC007879.3-202ENST00000448786 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
AC007879.3-202ENST00000448786 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
AC007879.3-202ENST00000448786 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
AC007879.3-202ENST00000448786 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
AC007879.3-202ENST00000448786 LHX8Q68G74 356 aa12.04□□□□□ -0.48
AC007879.3-202ENST00000448786 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
AC007879.3-202ENST00000448786 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
AC007879.3-202ENST00000448786 GABBR2O75899 941 aa11.96□□□□□ -0.49
AC007879.3-202ENST00000448786 PROM2Q8N271 834 aa11.92□□□□□ -0.5
AC007879.3-202ENST00000448786 FKBP8Q14318 412 aa11.9□□□□□ -0.5
AC007879.3-202ENST00000448786 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
AC007879.3-202ENST00000448786 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
AC007879.3-202ENST00000448786 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
AC007879.3-202ENST00000448786 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
AC007879.3-202ENST00000448786 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
AC007879.3-202ENST00000448786 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
AC007879.3-202ENST00000448786 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
AC007879.3-202ENST00000448786 MIER1Q8N108 512 aa11.71□□□□□ -0.53
AC007879.3-202ENST00000448786 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
AC007879.3-202ENST00000448786 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
AC007879.3-202ENST00000448786 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
AC007879.3-202ENST00000448786 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
AC007879.3-202ENST00000448786 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
AC007879.3-202ENST00000448786 CLCN6P51797 869 aa11.62□□□□□ -0.55
AC007879.3-202ENST00000448786 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
AC007879.3-202ENST00000448786 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
AC007879.3-202ENST00000448786 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
AC007879.3-202ENST00000448786 PHF12Q96QT6 1004 aa11.47□□□□□ -0.57
AC007879.3-202ENST00000448786 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms