RNA–Protein interactions for RNA: ENST00000448411.1

LINC00448-202, long intergenic non-protein coding RNA 448, humanhuman

TSL 2 BASIC

Gene LINC00448, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00448-202ENST00000448411 AEBP2Q6ZN18 517 aaPredicted RBP28.74■■■□□ 2.19
LINC00448-202ENST00000448411 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
LINC00448-202ENST00000448411 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
LINC00448-202ENST00000448411 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
LINC00448-202ENST00000448411 FOXD1Q16676 465 aa22.69■■□□□ 1.22
LINC00448-202ENST00000448411 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
LINC00448-202ENST00000448411 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
LINC00448-202ENST00000448411 ADRA2BP18089 450 aa21.58■■□□□ 1.05
LINC00448-202ENST00000448411 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
LINC00448-202ENST00000448411 MSH5O43196 834 aa21.01■□□□□ 0.95
LINC00448-202ENST00000448411 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
LINC00448-202ENST00000448411 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
LINC00448-202ENST00000448411 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
LINC00448-202ENST00000448411 POTEDQ86YR6 584 aa19.58■□□□□ 0.72
LINC00448-202ENST00000448411 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
LINC00448-202ENST00000448411 CNKSR2Q8WXI2 1034 aa19.26■□□□□ 0.67
LINC00448-202ENST00000448411 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
LINC00448-202ENST00000448411 KCNA4P22459 653 aa19■□□□□ 0.63
LINC00448-202ENST00000448411 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
LINC00448-202ENST00000448411 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
LINC00448-202ENST00000448411 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
LINC00448-202ENST00000448411 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
LINC00448-202ENST00000448411 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
LINC00448-202ENST00000448411 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
LINC00448-202ENST00000448411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
LINC00448-202ENST00000448411 RNF39Q9H2S5 420 aa18■□□□□ 0.47
LINC00448-202ENST00000448411 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
LINC00448-202ENST00000448411 C1QBPQ07021 282 aaKnown RBP17.76■□□□□ 0.43
LINC00448-202ENST00000448411 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
LINC00448-202ENST00000448411 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
LINC00448-202ENST00000448411 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
LINC00448-202ENST00000448411 ZBTB22O15209 634 aa17.51■□□□□ 0.39
LINC00448-202ENST00000448411 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
LINC00448-202ENST00000448411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
LINC00448-202ENST00000448411 HNRNPUL2Q1KMD3 747 aaKnown RBP17.4■□□□□ 0.38
LINC00448-202ENST00000448411 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
LINC00448-202ENST00000448411 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
LINC00448-202ENST00000448411 APLP2Q06481 763 aa17.26■□□□□ 0.35
LINC00448-202ENST00000448411 CAPN15O75808 1086 aa17.19■□□□□ 0.34
LINC00448-202ENST00000448411 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
LINC00448-202ENST00000448411 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
LINC00448-202ENST00000448411 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
LINC00448-202ENST00000448411 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
LINC00448-202ENST00000448411 DSG3P32926 999 aa17.03■□□□□ 0.32
LINC00448-202ENST00000448411 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
LINC00448-202ENST00000448411 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
LINC00448-202ENST00000448411 ABCB7O75027 752 aa16.85■□□□□ 0.29
LINC00448-202ENST00000448411 POLA2Q14181 598 aa16.75■□□□□ 0.27
LINC00448-202ENST00000448411 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
LINC00448-202ENST00000448411 FBLN2P98095 1184 aa16.27■□□□□ 0.2
LINC00448-202ENST00000448411 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
LINC00448-202ENST00000448411 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
LINC00448-202ENST00000448411 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
LINC00448-202ENST00000448411 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
LINC00448-202ENST00000448411 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
LINC00448-202ENST00000448411 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
LINC00448-202ENST00000448411 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
LINC00448-202ENST00000448411 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
LINC00448-202ENST00000448411 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
LINC00448-202ENST00000448411 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
LINC00448-202ENST00000448411 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
LINC00448-202ENST00000448411 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00448-202ENST00000448411 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
LINC00448-202ENST00000448411 PITPNM1O00562 1244 aa15.63■□□□□ 0.09
LINC00448-202ENST00000448411 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
LINC00448-202ENST00000448411 PROM2Q8N271 834 aa15.53■□□□□ 0.08
LINC00448-202ENST00000448411 FKBP8Q14318 412 aa15.5■□□□□ 0.07
LINC00448-202ENST00000448411 CLEC11AQ9Y240 323 aa15.48■□□□□ 0.07
LINC00448-202ENST00000448411 POTEHQ6S545 545 aa15.44■□□□□ 0.06
LINC00448-202ENST00000448411 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC00448-202ENST00000448411 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
LINC00448-202ENST00000448411 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
LINC00448-202ENST00000448411 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
LINC00448-202ENST00000448411 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
LINC00448-202ENST00000448411 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
LINC00448-202ENST00000448411 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
LINC00448-202ENST00000448411 FBXO3Q9UK99 471 aa15.03■□□□□ -0
LINC00448-202ENST00000448411 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
LINC00448-202ENST00000448411 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
LINC00448-202ENST00000448411 HAX1O00165 279 aa14.93□□□□□ -0.02
LINC00448-202ENST00000448411 MIER1Q8N108 512 aa14.93□□□□□ -0.02
LINC00448-202ENST00000448411 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
LINC00448-202ENST00000448411 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
LINC00448-202ENST00000448411 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
LINC00448-202ENST00000448411 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
LINC00448-202ENST00000448411 EVX2Q03828 476 aa14.84□□□□□ -0.03
LINC00448-202ENST00000448411 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
LINC00448-202ENST00000448411 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
LINC00448-202ENST00000448411 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
LINC00448-202ENST00000448411 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
LINC00448-202ENST00000448411 NUBP1P53384 320 aa14.64□□□□□ -0.07
LINC00448-202ENST00000448411 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
LINC00448-202ENST00000448411 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
LINC00448-202ENST00000448411 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
LINC00448-202ENST00000448411 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
LINC00448-202ENST00000448411 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
LINC00448-202ENST00000448411 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
LINC00448-202ENST00000448411 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
LINC00448-202ENST00000448411 GABBR2O75899 941 aa14.53□□□□□ -0.08
LINC00448-202ENST00000448411 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms