RNA–Protein interactions for RNA: ENST00000447966.6

ASIC1-202, Transcript of acid sensing ion channel subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ASIC1, Length 3,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-202ENST00000447966 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
ASIC1-202ENST00000447966 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
ASIC1-202ENST00000447966 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.99
ASIC1-202ENST00000447966 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
ASIC1-202ENST00000447966 PCGF6Q9BYE7 350 aa26.41■■□□□ 1.82
ASIC1-202ENST00000447966 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
ASIC1-202ENST00000447966 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
ASIC1-202ENST00000447966 HRCP23327 699 aa25.82■■□□□ 1.72
ASIC1-202ENST00000447966 LOC105371045A0A1W2PR82 267 aa25.76■■□□□ 1.71
ASIC1-202ENST00000447966 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
ASIC1-202ENST00000447966 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
ASIC1-202ENST00000447966 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
ASIC1-202ENST00000447966 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
ASIC1-202ENST00000447966 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
ASIC1-202ENST00000447966 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
ASIC1-202ENST00000447966 CCER1Q8TC90 406 aaPredicted RBP24.71■■□□□ 1.55
ASIC1-202ENST00000447966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.53
ASIC1-202ENST00000447966 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
ASIC1-202ENST00000447966 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
ASIC1-202ENST00000447966 YTHDC1Q96MU7 727 aaKnown RBP24.53■■□□□ 1.52
ASIC1-202ENST00000447966 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
ASIC1-202ENST00000447966 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
ASIC1-202ENST00000447966 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
ASIC1-202ENST00000447966 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
ASIC1-202ENST00000447966 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.46
ASIC1-202ENST00000447966 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
ASIC1-202ENST00000447966 GTF3C3Q9Y5Q9 886 aa24.1■■□□□ 1.45
ASIC1-202ENST00000447966 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
ASIC1-202ENST00000447966 HNRNPUL2Q1KMD3 747 aaKnown RBP24.05■■□□□ 1.44
ASIC1-202ENST00000447966 NEUROD1Q13562 356 aa24.02■■□□□ 1.44
ASIC1-202ENST00000447966 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
ASIC1-202ENST00000447966 APLP2Q06481 763 aa23.87■■□□□ 1.41
ASIC1-202ENST00000447966 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
ASIC1-202ENST00000447966 ABCC9O60706 1549 aa23.72■■□□□ 1.39
ASIC1-202ENST00000447966 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
ASIC1-202ENST00000447966 ITGAEP38570 1179 aa23.65■■□□□ 1.38
ASIC1-202ENST00000447966 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
ASIC1-202ENST00000447966 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
ASIC1-202ENST00000447966 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
ASIC1-202ENST00000447966 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
ASIC1-202ENST00000447966 MIER1Q8N108 512 aa23.44■■□□□ 1.34
ASIC1-202ENST00000447966 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
ASIC1-202ENST00000447966 CECR2Q9BXF3 1484 aa23.4■■□□□ 1.34
ASIC1-202ENST00000447966 BCANQ96GW7 911 aa23.34■■□□□ 1.33
ASIC1-202ENST00000447966 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
ASIC1-202ENST00000447966 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
ASIC1-202ENST00000447966 SOGA1O94964 1423 aa23.09■■□□□ 1.29
ASIC1-202ENST00000447966 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
ASIC1-202ENST00000447966 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
ASIC1-202ENST00000447966 CNGB1Q14028 1251 aaPredicted RBP22.99■■□□□ 1.27
ASIC1-202ENST00000447966 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
ASIC1-202ENST00000447966 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
ASIC1-202ENST00000447966 MYT1Q01538 1121 aa22.95■■□□□ 1.27
ASIC1-202ENST00000447966 WIZO95785 1651 aa22.88■■□□□ 1.25
ASIC1-202ENST00000447966 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
ASIC1-202ENST00000447966 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
ASIC1-202ENST00000447966 NEFLP07196 543 aa22.85■■□□□ 1.25
ASIC1-202ENST00000447966 P3H3Q8IVL6 736 aa22.85■■□□□ 1.25
ASIC1-202ENST00000447966 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
ASIC1-202ENST00000447966 CLIP1P30622 1438 aa22.76■■□□□ 1.23
ASIC1-202ENST00000447966 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
ASIC1-202ENST00000447966 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
ASIC1-202ENST00000447966 FKBP8Q14318 412 aa22.74■■□□□ 1.23
ASIC1-202ENST00000447966 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
ASIC1-202ENST00000447966 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
ASIC1-202ENST00000447966 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
ASIC1-202ENST00000447966 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
ASIC1-202ENST00000447966 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
ASIC1-202ENST00000447966 IRX6P78412 446 aaPredicted RBP22.6■■□□□ 1.21
ASIC1-202ENST00000447966 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
ASIC1-202ENST00000447966 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
ASIC1-202ENST00000447966 SIN3AQ96ST3 1273 aa22.54■■□□□ 1.2
ASIC1-202ENST00000447966 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
ASIC1-202ENST00000447966 SENP3-EIF4A1A0A087X0R7 540 aa22.48■■□□□ 1.19
ASIC1-202ENST00000447966 ANP32CO43423 234 aa22.43■■□□□ 1.18
ASIC1-202ENST00000447966 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
ASIC1-202ENST00000447966 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
ASIC1-202ENST00000447966 NACADO15069 1562 aa22.37■■□□□ 1.17
ASIC1-202ENST00000447966 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
ASIC1-202ENST00000447966 EEA1Q15075 1411 aa22.34■■□□□ 1.17
ASIC1-202ENST00000447966 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
ASIC1-202ENST00000447966 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
ASIC1-202ENST00000447966 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
ASIC1-202ENST00000447966 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
ASIC1-202ENST00000447966 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
ASIC1-202ENST00000447966 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
ASIC1-202ENST00000447966 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
ASIC1-202ENST00000447966 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
ASIC1-202ENST00000447966 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
ASIC1-202ENST00000447966 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
ASIC1-202ENST00000447966 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
ASIC1-202ENST00000447966 CCNB3Q8WWL7 1395 aa22.12■■□□□ 1.13
ASIC1-202ENST00000447966 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
ASIC1-202ENST00000447966 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
ASIC1-202ENST00000447966 RAB3GAP2Q9H2M9 1393 aa22.08■■□□□ 1.13
ASIC1-202ENST00000447966 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
ASIC1-202ENST00000447966 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
ASIC1-202ENST00000447966 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
ASIC1-202ENST00000447966 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
ASIC1-202ENST00000447966 NBR1Q14596 966 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms