RNA–Protein interactions for RNA: ENST00000445245.5

BRWD1-208, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best)

Gene BRWD1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-208ENST00000445245 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
BRWD1-208ENST00000445245 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
BRWD1-208ENST00000445245 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
BRWD1-208ENST00000445245 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
BRWD1-208ENST00000445245 FOXD1Q16676 465 aa12.22□□□□□ -0.45
BRWD1-208ENST00000445245 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
BRWD1-208ENST00000445245 PPP6R1Q9UPN7 881 aa11.7□□□□□ -0.54
BRWD1-208ENST00000445245 ADRA2BP18089 450 aa11.62□□□□□ -0.55
BRWD1-208ENST00000445245 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
BRWD1-208ENST00000445245 MSH5O43196 834 aa11.22□□□□□ -0.61
BRWD1-208ENST00000445245 MAPK8IP2Q13387 824 aaPredicted RBP10.61□□□□□ -0.71
BRWD1-208ENST00000445245 POTEDQ86YR6 584 aa10.6□□□□□ -0.71
BRWD1-208ENST00000445245 PPP4R3CPQ6ZMV5 832 aa10.57□□□□□ -0.72
BRWD1-208ENST00000445245 NISCHQ9Y2I1 1504 aa10.56□□□□□ -0.72
BRWD1-208ENST00000445245 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
BRWD1-208ENST00000445245 DMRT2Q9Y5R5 561 aa10.44□□□□□ -0.74
BRWD1-208ENST00000445245 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
BRWD1-208ENST00000445245 KCNA4P22459 653 aa10.19□□□□□ -0.78
BRWD1-208ENST00000445245 HOXD11P31277 338 aaPredicted RBP10.18□□□□□ -0.78
BRWD1-208ENST00000445245 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
BRWD1-208ENST00000445245 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
BRWD1-208ENST00000445245 NCBP3Q53F19 620 aaKnown RBP10.13□□□□□ -0.79
BRWD1-208ENST00000445245 ABCC9O60706 1549 aa9.93□□□□□ -0.82
BRWD1-208ENST00000445245 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
BRWD1-208ENST00000445245 DCAF8L1A6NGE4 600 aa9.87□□□□□ -0.83
BRWD1-208ENST00000445245 RNF39Q9H2S5 420 aa9.69□□□□□ -0.86
BRWD1-208ENST00000445245 SLC4A2P04920 1241 aa9.66□□□□□ -0.86
BRWD1-208ENST00000445245 CCDC180Q9P1Z9 1646 aa9.62□□□□□ -0.87
BRWD1-208ENST00000445245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.881e-9■□□□□ 10
BRWD1-208ENST00000445245 SLC4A1APQ9BWU0 796 aaKnown RBP9.58□□□□□ -0.88
BRWD1-208ENST00000445245 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
BRWD1-208ENST00000445245 C1QBPQ07021 282 aaKnown RBP9.5□□□□□ -0.89
BRWD1-208ENST00000445245 ZBTB22O15209 634 aa9.45□□□□□ -0.9
BRWD1-208ENST00000445245 CACNB1Q02641 598 aaPredicted RBP9.45□□□□□ -0.9
BRWD1-208ENST00000445245 FOXD4L1Q9NU39 408 aa9.35□□□□□ -0.91
BRWD1-208ENST00000445245 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
BRWD1-208ENST00000445245 MYCNP04198 464 aaPredicted RBP9.29□□□□□ -0.92
BRWD1-208ENST00000445245 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.92
BRWD1-208ENST00000445245 CSRNP3Q8WYN3 585 aa9.2□□□□□ -0.94
BRWD1-208ENST00000445245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.2□□□□□ -0.94
BRWD1-208ENST00000445245 HNRNPUL2Q1KMD3 747 aaKnown RBP9.2□□□□□ -0.94
BRWD1-208ENST00000445245 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
BRWD1-208ENST00000445245 ATF5Q9Y2D1 282 aaPredicted RBP9.19□□□□□ -0.94
BRWD1-208ENST00000445245 UNC13AQ9UPW8 1703 aa9.18□□□□□ -0.94
BRWD1-208ENST00000445245 CAPN15O75808 1086 aa9.17□□□□□ -0.94
BRWD1-208ENST00000445245 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRWD1-208ENST00000445245 DSG3P32926 999 aa9.16□□□□□ -0.94
BRWD1-208ENST00000445245 EHMT2Q96KQ7 1210 aa9.13□□□□□ -0.95
BRWD1-208ENST00000445245 NACADO15069 1562 aa9.11□□□□□ -0.95
BRWD1-208ENST00000445245 TRHP20396 242 aaPredicted RBP9.1□□□□□ -0.95
BRWD1-208ENST00000445245 APLP2Q06481 763 aa9.08□□□□□ -0.96
BRWD1-208ENST00000445245 ZNF219Q9P2Y4 722 aaPredicted RBP9.08□□□□□ -0.96
BRWD1-208ENST00000445245 BICRAQ9NZM4 1560 aa9.06□□□□□ -0.96
BRWD1-208ENST00000445245 ABCB7O75027 752 aa9.04□□□□□ -0.96
BRWD1-208ENST00000445245 DCAF8L2P0C7V8 631 aa9.04□□□□□ -0.96
BRWD1-208ENST00000445245 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
BRWD1-208ENST00000445245 POLA2Q14181 598 aa8.97□□□□□ -0.97
BRWD1-208ENST00000445245 CC2D2AQ9P2K1 1620 aa8.95□□□□□ -0.98
BRWD1-208ENST00000445245 CECR2Q9BXF3 1484 aa8.94□□□□□ -0.98
BRWD1-208ENST00000445245 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
BRWD1-208ENST00000445245 MYO15BQ96JP2 1530 aa8.85□□□□□ -0.99
BRWD1-208ENST00000445245 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
BRWD1-208ENST00000445245 SCRIBQ14160 1630 aa8.82□□□□□ -1
BRWD1-208ENST00000445245 SHROOM4Q9ULL8 1493 aa8.8□□□□□ -1
BRWD1-208ENST00000445245 MKRN4PQ13434 485 aaPredicted RBP8.78□□□□□ -1
BRWD1-208ENST00000445245 ZCCHC6Q5VYS8 1495 aaKnown RBP8.71□□□□□ -1.01
BRWD1-208ENST00000445245 ZBTB12Q9Y330 459 aaPredicted RBP8.71□□□□□ -1.02
BRWD1-208ENST00000445245 OSCARQ8IYS5 282 aa8.68□□□□□ -1.02
BRWD1-208ENST00000445245 DCAF1Q9Y4B6 1507 aa8.66□□□□□ -1.02
BRWD1-208ENST00000445245 FBLN2P98095 1184 aa8.6□□□□□ -1.03
BRWD1-208ENST00000445245 RBM42Q9BTD8 480 aaKnown RBP8.6□□□□□ -1.03
BRWD1-208ENST00000445245 CUX2O14529 1486 aa8.59□□□□□ -1.03
BRWD1-208ENST00000445245 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
BRWD1-208ENST00000445245 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
BRWD1-208ENST00000445245 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
BRWD1-208ENST00000445245 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
BRWD1-208ENST00000445245 AKT1S1Q96B36 256 aa8.53□□□□□ -1.04
BRWD1-208ENST00000445245 SSUH2Q9Y2M2 353 aa8.51□□□□□ -1.05
BRWD1-208ENST00000445245 REM2Q8IYK8 340 aaPredicted RBP8.47□□□□□ -1.05
BRWD1-208ENST00000445245 NESP48681 1621 aa8.46□□□□□ -1.05
BRWD1-208ENST00000445245 TRIM41Q8WV44 630 aa8.46□□□□□ -1.06
BRWD1-208ENST00000445245 ZNF692Q9BU19 519 aaPredicted RBP8.45□□□□□ -1.06
BRWD1-208ENST00000445245 THOC2Q8NI27 1593 aaKnown RBP8.44□□□□□ -1.06
BRWD1-208ENST00000445245 PITPNM1O00562 1244 aa8.4□□□□□ -1.07
BRWD1-208ENST00000445245 NCAPD3P42695 1498 aa8.4□□□□□ -1.07
BRWD1-208ENST00000445245 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
BRWD1-208ENST00000445245 CHRDL2Q6WN34 429 aa8.39□□□□□ -1.07
BRWD1-208ENST00000445245 SPDYE4A6NLX3 237 aa8.38□□□□□ -1.07
BRWD1-208ENST00000445245 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
BRWD1-208ENST00000445245 ATAD2BQ9ULI0 1458 aa8.38□□□□□ -1.07
BRWD1-208ENST00000445245 HMGXB3Q12766 1538 aa8.36□□□□□ -1.07
BRWD1-208ENST00000445245 SMARCA4P51532 1647 aa8.34□□□□□ -1.07
BRWD1-208ENST00000445245 PROM2Q8N271 834 aa8.34□□□□□ -1.08
BRWD1-208ENST00000445245 POTEHQ6S545 545 aa8.31□□□□□ -1.08
BRWD1-208ENST00000445245 BAZ1BQ9UIG0 1483 aaKnown RBP8.3□□□□□ -1.08
BRWD1-208ENST00000445245 FXR2P51116 673 aaKnown RBP eCLIP8.29□□□□□ -1.08
BRWD1-208ENST00000445245 LAMC3Q9Y6N6 1575 aa8.29□□□□□ -1.08
BRWD1-208ENST00000445245 PIP4P2Q8N4L2 257 aa8.28□□□□□ -1.08
BRWD1-208ENST00000445245 SPDYE1Q8NFV5 336 aaPredicted RBP8.28□□□□□ -1.08
BRWD1-208ENST00000445245 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms