RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 AEBP2Q6ZN18 517 aaPredicted RBP28.8■■■□□ 2.2
LINC01004-201ENST00000445184 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
LINC01004-201ENST00000445184 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
LINC01004-201ENST00000445184 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
LINC01004-201ENST00000445184 FOXD1Q16676 465 aa23.05■■□□□ 1.28
LINC01004-201ENST00000445184 POTEDQ86YR6 584 aa22.07■■□□□ 1.12
LINC01004-201ENST00000445184 MSH5O43196 834 aa21.8■■□□□ 1.08
LINC01004-201ENST00000445184 PIAS4Q8N2W9 510 aaPredicted RBP21.44■■□□□ 1.02
LINC01004-201ENST00000445184 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
LINC01004-201ENST00000445184 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
LINC01004-201ENST00000445184 ADRA2BP18089 450 aa21.08■□□□□ 0.97
LINC01004-201ENST00000445184 MAPK8IP2Q13387 824 aaPredicted RBP19.49■□□□□ 0.71
LINC01004-201ENST00000445184 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
LINC01004-201ENST00000445184 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
LINC01004-201ENST00000445184 CACNB1Q02641 598 aaPredicted RBP19.01■□□□□ 0.63
LINC01004-201ENST00000445184 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
LINC01004-201ENST00000445184 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
LINC01004-201ENST00000445184 HOXD11P31277 338 aaPredicted RBP18.59■□□□□ 0.57
LINC01004-201ENST00000445184 RNF39Q9H2S5 420 aa18.53■□□□□ 0.56
LINC01004-201ENST00000445184 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
LINC01004-201ENST00000445184 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
LINC01004-201ENST00000445184 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
LINC01004-201ENST00000445184 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
LINC01004-201ENST00000445184 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
LINC01004-201ENST00000445184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.74■□□□□ 0.43
LINC01004-201ENST00000445184 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
LINC01004-201ENST00000445184 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
LINC01004-201ENST00000445184 POTEHQ6S545 545 aa17.22■□□□□ 0.35
LINC01004-201ENST00000445184 CAPN15O75808 1086 aa17.2■□□□□ 0.34
LINC01004-201ENST00000445184 DSG3P32926 999 aa17.19■□□□□ 0.34
LINC01004-201ENST00000445184 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
LINC01004-201ENST00000445184 APLP2Q06481 763 aa16.82■□□□□ 0.28
LINC01004-201ENST00000445184 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
LINC01004-201ENST00000445184 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
LINC01004-201ENST00000445184 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
LINC01004-201ENST00000445184 ABCB7O75027 752 aa16.72■□□□□ 0.27
LINC01004-201ENST00000445184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
LINC01004-201ENST00000445184 KCNA4P22459 653 aa16.68■□□□□ 0.26
LINC01004-201ENST00000445184 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
LINC01004-201ENST00000445184 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
LINC01004-201ENST00000445184 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
LINC01004-201ENST00000445184 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
LINC01004-201ENST00000445184 POLA2Q14181 598 aa16.23■□□□□ 0.19
LINC01004-201ENST00000445184 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
LINC01004-201ENST00000445184 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
LINC01004-201ENST00000445184 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
LINC01004-201ENST00000445184 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
LINC01004-201ENST00000445184 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
LINC01004-201ENST00000445184 REM2Q8IYK8 340 aaPredicted RBP15.79■□□□□ 0.12
LINC01004-201ENST00000445184 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
LINC01004-201ENST00000445184 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
LINC01004-201ENST00000445184 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
LINC01004-201ENST00000445184 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
LINC01004-201ENST00000445184 HAX1O00165 279 aa15.64■□□□□ 0.09
LINC01004-201ENST00000445184 PITPNM1O00562 1244 aa15.61■□□□□ 0.09
LINC01004-201ENST00000445184 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01004-201ENST00000445184 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
LINC01004-201ENST00000445184 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
LINC01004-201ENST00000445184 EVX2Q03828 476 aa15.35■□□□□ 0.05
LINC01004-201ENST00000445184 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
LINC01004-201ENST00000445184 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
LINC01004-201ENST00000445184 FBLN2P98095 1184 aa15.3■□□□□ 0.04
LINC01004-201ENST00000445184 ZBTB22O15209 634 aa15.29■□□□□ 0.04
LINC01004-201ENST00000445184 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
LINC01004-201ENST00000445184 SPDYE1Q8NFV5 336 aaPredicted RBP15.21■□□□□ 0.03
LINC01004-201ENST00000445184 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
LINC01004-201ENST00000445184 C19orf67A6NJJ6 358 aa15.11■□□□□ 0.01
LINC01004-201ENST00000445184 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
LINC01004-201ENST00000445184 SSUH2Q9Y2M2 353 aa15.06■□□□□ 0
LINC01004-201ENST00000445184 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
LINC01004-201ENST00000445184 GABBR2O75899 941 aa15.01□□□□□ -0.01
LINC01004-201ENST00000445184 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
LINC01004-201ENST00000445184 LHX8Q68G74 356 aa14.93□□□□□ -0.02
LINC01004-201ENST00000445184 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
LINC01004-201ENST00000445184 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINC01004-201ENST00000445184 CD44P16070 742 aaKnown RBP14.72□□□□□ -0.05
LINC01004-201ENST00000445184 CLCN6P51797 869 aa14.68□□□□□ -0.06
LINC01004-201ENST00000445184 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
LINC01004-201ENST00000445184 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
LINC01004-201ENST00000445184 DCBLD2Q96PD2 775 aa14.54□□□□□ -0.08
LINC01004-201ENST00000445184 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
LINC01004-201ENST00000445184 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
LINC01004-201ENST00000445184 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
LINC01004-201ENST00000445184 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
LINC01004-201ENST00000445184 CREBZFQ9NS37 354 aa14.36□□□□□ -0.11
LINC01004-201ENST00000445184 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
LINC01004-201ENST00000445184 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
LINC01004-201ENST00000445184 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
LINC01004-201ENST00000445184 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
LINC01004-201ENST00000445184 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
LINC01004-201ENST00000445184 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
LINC01004-201ENST00000445184 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC01004-201ENST00000445184 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
LINC01004-201ENST00000445184 POTEMA6NI47 508 aa14.08□□□□□ -0.16
LINC01004-201ENST00000445184 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
LINC01004-201ENST00000445184 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
LINC01004-201ENST00000445184 POTEGQ6S5H5 508 aa14.02□□□□□ -0.17
LINC01004-201ENST00000445184 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
LINC01004-201ENST00000445184 METRNQ9UJH8 293 aa13.98□□□□□ -0.17
LINC01004-201ENST00000445184 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms