RNA–Protein interactions for RNA: ENST00000444744.1

LINC00412-201, long intergenic non-protein coding RNA 412, humanhuman

TSL 2 BASIC

Gene LINC00412, Length 420 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00412-201ENST00000444744 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
LINC00412-201ENST00000444744 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
LINC00412-201ENST00000444744 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
LINC00412-201ENST00000444744 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
LINC00412-201ENST00000444744 FOXD1Q16676 465 aa20.72■□□□□ 0.91
LINC00412-201ENST00000444744 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
LINC00412-201ENST00000444744 MSH5O43196 834 aa19.61■□□□□ 0.73
LINC00412-201ENST00000444744 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
LINC00412-201ENST00000444744 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
LINC00412-201ENST00000444744 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
LINC00412-201ENST00000444744 ADRA2BP18089 450 aa19.17■□□□□ 0.66
LINC00412-201ENST00000444744 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
LINC00412-201ENST00000444744 KCNA4P22459 653 aa17.7■□□□□ 0.42
LINC00412-201ENST00000444744 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
LINC00412-201ENST00000444744 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
LINC00412-201ENST00000444744 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
LINC00412-201ENST00000444744 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
LINC00412-201ENST00000444744 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
LINC00412-201ENST00000444744 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
LINC00412-201ENST00000444744 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
LINC00412-201ENST00000444744 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
LINC00412-201ENST00000444744 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
LINC00412-201ENST00000444744 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
LINC00412-201ENST00000444744 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
LINC00412-201ENST00000444744 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
LINC00412-201ENST00000444744 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
LINC00412-201ENST00000444744 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
LINC00412-201ENST00000444744 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
LINC00412-201ENST00000444744 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
LINC00412-201ENST00000444744 ZBTB22O15209 634 aa16.28■□□□□ 0.2
LINC00412-201ENST00000444744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC00412-201ENST00000444744 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
LINC00412-201ENST00000444744 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
LINC00412-201ENST00000444744 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
LINC00412-201ENST00000444744 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
LINC00412-201ENST00000444744 CAPN15O75808 1086 aa15.63■□□□□ 0.09
LINC00412-201ENST00000444744 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
LINC00412-201ENST00000444744 APLP2Q06481 763 aa15.55■□□□□ 0.08
LINC00412-201ENST00000444744 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
LINC00412-201ENST00000444744 DSG3P32926 999 aa15.51■□□□□ 0.07
LINC00412-201ENST00000444744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
LINC00412-201ENST00000444744 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
LINC00412-201ENST00000444744 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
LINC00412-201ENST00000444744 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
LINC00412-201ENST00000444744 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
LINC00412-201ENST00000444744 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
LINC00412-201ENST00000444744 ABCB7O75027 752 aa15.17■□□□□ 0.02
LINC00412-201ENST00000444744 POTEHQ6S545 545 aa15.1■□□□□ 0.01
LINC00412-201ENST00000444744 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
LINC00412-201ENST00000444744 FKBP8Q14318 412 aa14.91□□□□□ -0.02
LINC00412-201ENST00000444744 POLA2Q14181 598 aa14.87□□□□□ -0.03
LINC00412-201ENST00000444744 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
LINC00412-201ENST00000444744 FBLN2P98095 1184 aa14.68□□□□□ -0.06
LINC00412-201ENST00000444744 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
LINC00412-201ENST00000444744 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
LINC00412-201ENST00000444744 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
LINC00412-201ENST00000444744 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
LINC00412-201ENST00000444744 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
LINC00412-201ENST00000444744 PROM2Q8N271 834 aa14.33□□□□□ -0.12
LINC00412-201ENST00000444744 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
LINC00412-201ENST00000444744 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
LINC00412-201ENST00000444744 AMER1Q5JTC6 1135 aaPredicted RBP14.25□□□□□ -0.13
LINC00412-201ENST00000444744 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
LINC00412-201ENST00000444744 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
LINC00412-201ENST00000444744 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
LINC00412-201ENST00000444744 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
LINC00412-201ENST00000444744 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
LINC00412-201ENST00000444744 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
LINC00412-201ENST00000444744 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
LINC00412-201ENST00000444744 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
LINC00412-201ENST00000444744 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
LINC00412-201ENST00000444744 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
LINC00412-201ENST00000444744 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00412-201ENST00000444744 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
LINC00412-201ENST00000444744 HAX1O00165 279 aa14.02□□□□□ -0.17
LINC00412-201ENST00000444744 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
LINC00412-201ENST00000444744 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
LINC00412-201ENST00000444744 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
LINC00412-201ENST00000444744 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
LINC00412-201ENST00000444744 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
LINC00412-201ENST00000444744 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
LINC00412-201ENST00000444744 MIER1Q8N108 512 aa13.77□□□□□ -0.21
LINC00412-201ENST00000444744 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
LINC00412-201ENST00000444744 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
LINC00412-201ENST00000444744 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
LINC00412-201ENST00000444744 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
LINC00412-201ENST00000444744 EVX2Q03828 476 aa13.65□□□□□ -0.22
LINC00412-201ENST00000444744 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
LINC00412-201ENST00000444744 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
LINC00412-201ENST00000444744 PKD2Q13563 968 aa13.57□□□□□ -0.24
LINC00412-201ENST00000444744 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
LINC00412-201ENST00000444744 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
LINC00412-201ENST00000444744 GABBR2O75899 941 aa13.45□□□□□ -0.26
LINC00412-201ENST00000444744 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
LINC00412-201ENST00000444744 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
LINC00412-201ENST00000444744 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
LINC00412-201ENST00000444744 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
LINC00412-201ENST00000444744 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
LINC00412-201ENST00000444744 CLCN6P51797 869 aa13.39□□□□□ -0.27
LINC00412-201ENST00000444744 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms