RNA–Protein interactions for RNA: ENST00000444617.1

USP9YP17-201, Transcript of USP9Y pseudogene 17, humanhuman

BASIC

Gene USP9YP17, Length 696 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP17-201ENST00000444617 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
USP9YP17-201ENST00000444617 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
USP9YP17-201ENST00000444617 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
USP9YP17-201ENST00000444617 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
USP9YP17-201ENST00000444617 PLPPR3Q6T4P5 718 aa20.38■□□□□ 0.85
USP9YP17-201ENST00000444617 FOXD1Q16676 465 aa20.21■□□□□ 0.83
USP9YP17-201ENST00000444617 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
USP9YP17-201ENST00000444617 ADRA2BP18089 450 aa19.47■□□□□ 0.71
USP9YP17-201ENST00000444617 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
USP9YP17-201ENST00000444617 MSH5O43196 834 aa18.56■□□□□ 0.56
USP9YP17-201ENST00000444617 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
USP9YP17-201ENST00000444617 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
USP9YP17-201ENST00000444617 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
USP9YP17-201ENST00000444617 MAPK8IP2Q13387 824 aaPredicted RBP17.67■□□□□ 0.42
USP9YP17-201ENST00000444617 KCNA4P22459 653 aa17.64■□□□□ 0.41
USP9YP17-201ENST00000444617 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
USP9YP17-201ENST00000444617 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
USP9YP17-201ENST00000444617 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
USP9YP17-201ENST00000444617 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
USP9YP17-201ENST00000444617 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
USP9YP17-201ENST00000444617 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
USP9YP17-201ENST00000444617 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
USP9YP17-201ENST00000444617 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
USP9YP17-201ENST00000444617 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
USP9YP17-201ENST00000444617 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
USP9YP17-201ENST00000444617 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
USP9YP17-201ENST00000444617 ZBTB22O15209 634 aa16.27■□□□□ 0.2
USP9YP17-201ENST00000444617 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
USP9YP17-201ENST00000444617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
USP9YP17-201ENST00000444617 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
USP9YP17-201ENST00000444617 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
USP9YP17-201ENST00000444617 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
USP9YP17-201ENST00000444617 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
USP9YP17-201ENST00000444617 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
USP9YP17-201ENST00000444617 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
USP9YP17-201ENST00000444617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
USP9YP17-201ENST00000444617 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
USP9YP17-201ENST00000444617 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
USP9YP17-201ENST00000444617 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
USP9YP17-201ENST00000444617 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
USP9YP17-201ENST00000444617 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
USP9YP17-201ENST00000444617 APLP2Q06481 763 aa15.53■□□□□ 0.08
USP9YP17-201ENST00000444617 CAPN15O75808 1086 aa15.41■□□□□ 0.06
USP9YP17-201ENST00000444617 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
USP9YP17-201ENST00000444617 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
USP9YP17-201ENST00000444617 DSG3P32926 999 aa15.2■□□□□ 0.02
USP9YP17-201ENST00000444617 ABCB7O75027 752 aa15.15■□□□□ 0.02
USP9YP17-201ENST00000444617 POLA2Q14181 598 aa15.14■□□□□ 0.01
USP9YP17-201ENST00000444617 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
USP9YP17-201ENST00000444617 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
USP9YP17-201ENST00000444617 FBLN2P98095 1184 aa14.81□□□□□ -0.04
USP9YP17-201ENST00000444617 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
USP9YP17-201ENST00000444617 FKBP8Q14318 412 aa14.58□□□□□ -0.08
USP9YP17-201ENST00000444617 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
USP9YP17-201ENST00000444617 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
USP9YP17-201ENST00000444617 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
USP9YP17-201ENST00000444617 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
USP9YP17-201ENST00000444617 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
USP9YP17-201ENST00000444617 RBM42Q9BTD8 480 aaKnown RBP14.42□□□□□ -0.1
USP9YP17-201ENST00000444617 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
USP9YP17-201ENST00000444617 PROM2Q8N271 834 aa14.36□□□□□ -0.11
USP9YP17-201ENST00000444617 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
USP9YP17-201ENST00000444617 POTEHQ6S545 545 aa14.25□□□□□ -0.13
USP9YP17-201ENST00000444617 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
USP9YP17-201ENST00000444617 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
USP9YP17-201ENST00000444617 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
USP9YP17-201ENST00000444617 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
USP9YP17-201ENST00000444617 PITPNM1O00562 1244 aa14□□□□□ -0.17
USP9YP17-201ENST00000444617 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
USP9YP17-201ENST00000444617 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
USP9YP17-201ENST00000444617 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
USP9YP17-201ENST00000444617 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
USP9YP17-201ENST00000444617 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
USP9YP17-201ENST00000444617 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP9YP17-201ENST00000444617 MIER1Q8N108 512 aa13.74□□□□□ -0.21
USP9YP17-201ENST00000444617 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
USP9YP17-201ENST00000444617 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
USP9YP17-201ENST00000444617 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
USP9YP17-201ENST00000444617 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
USP9YP17-201ENST00000444617 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
USP9YP17-201ENST00000444617 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
USP9YP17-201ENST00000444617 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
USP9YP17-201ENST00000444617 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
USP9YP17-201ENST00000444617 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
USP9YP17-201ENST00000444617 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
USP9YP17-201ENST00000444617 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
USP9YP17-201ENST00000444617 SPOCK2Q92563 424 aa13.5□□□□□ -0.25
USP9YP17-201ENST00000444617 NUBP1P53384 320 aa13.45□□□□□ -0.26
USP9YP17-201ENST00000444617 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP9YP17-201ENST00000444617 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
USP9YP17-201ENST00000444617 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
USP9YP17-201ENST00000444617 AMER1Q5JTC6 1135 aaPredicted RBP13.35□□□□□ -0.27
USP9YP17-201ENST00000444617 PKD2Q13563 968 aa13.28□□□□□ -0.28
USP9YP17-201ENST00000444617 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
USP9YP17-201ENST00000444617 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
USP9YP17-201ENST00000444617 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
USP9YP17-201ENST00000444617 GSE1Q14687 1217 aa13.25□□□□□ -0.29
USP9YP17-201ENST00000444617 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
USP9YP17-201ENST00000444617 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
USP9YP17-201ENST00000444617 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms