RNA–Protein interactions for RNA: ENST00000443616.1

RPS3AP12-201, Transcript of ribosomal protein S3a pseudogene 12, humanhuman

BASIC

Gene RPS3AP12, Length 753 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP12-201ENST00000443616 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
RPS3AP12-201ENST00000443616 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
RPS3AP12-201ENST00000443616 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
RPS3AP12-201ENST00000443616 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
RPS3AP12-201ENST00000443616 FOXD1Q16676 465 aa14.09□□□□□ -0.15
RPS3AP12-201ENST00000443616 PLPPR3Q6T4P5 718 aa13.57□□□□□ -0.24
RPS3AP12-201ENST00000443616 MSH5O43196 834 aa13.21□□□□□ -0.29
RPS3AP12-201ENST00000443616 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
RPS3AP12-201ENST00000443616 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
RPS3AP12-201ENST00000443616 ADRA2BP18089 450 aa13.15□□□□□ -0.3
RPS3AP12-201ENST00000443616 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
RPS3AP12-201ENST00000443616 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
RPS3AP12-201ENST00000443616 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
RPS3AP12-201ENST00000443616 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
RPS3AP12-201ENST00000443616 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
RPS3AP12-201ENST00000443616 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
RPS3AP12-201ENST00000443616 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
RPS3AP12-201ENST00000443616 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
RPS3AP12-201ENST00000443616 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
RPS3AP12-201ENST00000443616 DCAF8L1A6NGE4 600 aa11.43□□□□□ -0.58
RPS3AP12-201ENST00000443616 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
RPS3AP12-201ENST00000443616 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
RPS3AP12-201ENST00000443616 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
RPS3AP12-201ENST00000443616 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
RPS3AP12-201ENST00000443616 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
RPS3AP12-201ENST00000443616 KCNA4P22459 653 aa11.07□□□□□ -0.64
RPS3AP12-201ENST00000443616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
RPS3AP12-201ENST00000443616 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
RPS3AP12-201ENST00000443616 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
RPS3AP12-201ENST00000443616 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
RPS3AP12-201ENST00000443616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
RPS3AP12-201ENST00000443616 CAPN15O75808 1086 aa10.58□□□□□ -0.72
RPS3AP12-201ENST00000443616 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
RPS3AP12-201ENST00000443616 APLP2Q06481 763 aa10.57□□□□□ -0.72
RPS3AP12-201ENST00000443616 DSG3P32926 999 aa10.55□□□□□ -0.72
RPS3AP12-201ENST00000443616 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
RPS3AP12-201ENST00000443616 SLC4A1APQ9BWU0 796 aaKnown RBP10.47□□□□□ -0.73
RPS3AP12-201ENST00000443616 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
RPS3AP12-201ENST00000443616 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
RPS3AP12-201ENST00000443616 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
RPS3AP12-201ENST00000443616 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
RPS3AP12-201ENST00000443616 ABCB7O75027 752 aa10.31□□□□□ -0.76
RPS3AP12-201ENST00000443616 ZBTB22O15209 634 aa10.18□□□□□ -0.78
RPS3AP12-201ENST00000443616 POLA2Q14181 598 aa10.18□□□□□ -0.78
RPS3AP12-201ENST00000443616 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
RPS3AP12-201ENST00000443616 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
RPS3AP12-201ENST00000443616 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
RPS3AP12-201ENST00000443616 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
RPS3AP12-201ENST00000443616 POTEHQ6S545 545 aa10□□□□□ -0.81
RPS3AP12-201ENST00000443616 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
RPS3AP12-201ENST00000443616 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
RPS3AP12-201ENST00000443616 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
RPS3AP12-201ENST00000443616 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
RPS3AP12-201ENST00000443616 FBLN2P98095 1184 aa9.78□□□□□ -0.84
RPS3AP12-201ENST00000443616 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
RPS3AP12-201ENST00000443616 SPDYE2BA6NHP3 402 aa9.72□□□□□ -0.85
RPS3AP12-201ENST00000443616 SPDYE6P0CI01 402 aa9.72□□□□□ -0.85
RPS3AP12-201ENST00000443616 SPDYE2Q495Y8 402 aa9.72□□□□□ -0.85
RPS3AP12-201ENST00000443616 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
RPS3AP12-201ENST00000443616 PITPNM1O00562 1244 aa9.63□□□□□ -0.87
RPS3AP12-201ENST00000443616 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
RPS3AP12-201ENST00000443616 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
RPS3AP12-201ENST00000443616 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
RPS3AP12-201ENST00000443616 FXR2P51116 673 aaKnown RBP eCLIP9.58□□□□□ -0.88
RPS3AP12-201ENST00000443616 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
RPS3AP12-201ENST00000443616 SPDYE1Q8NFV5 336 aaPredicted RBP9.52□□□□□ -0.89
RPS3AP12-201ENST00000443616 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
RPS3AP12-201ENST00000443616 PABPN1Q86U42 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
RPS3AP12-201ENST00000443616 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
RPS3AP12-201ENST00000443616 ABCC9O60706 1549 aa9.41□□□□□ -0.9
RPS3AP12-201ENST00000443616 HAX1O00165 279 aa9.38□□□□□ -0.91
RPS3AP12-201ENST00000443616 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
RPS3AP12-201ENST00000443616 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
RPS3AP12-201ENST00000443616 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
RPS3AP12-201ENST00000443616 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
RPS3AP12-201ENST00000443616 EVX2Q03828 476 aa9.27□□□□□ -0.93
RPS3AP12-201ENST00000443616 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
RPS3AP12-201ENST00000443616 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
RPS3AP12-201ENST00000443616 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
RPS3AP12-201ENST00000443616 STAG3Q9UJ98 1225 aa9.24□□□□□ -0.93
RPS3AP12-201ENST00000443616 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
RPS3AP12-201ENST00000443616 PROM2Q8N271 834 aa9.12□□□□□ -0.95
RPS3AP12-201ENST00000443616 CREBZFQ9NS37 354 aa9.12□□□□□ -0.95
RPS3AP12-201ENST00000443616 GABBR2O75899 941 aa9.09□□□□□ -0.95
RPS3AP12-201ENST00000443616 CD44P16070 742 aaKnown RBP9.08□□□□□ -0.96
RPS3AP12-201ENST00000443616 CLCN6P51797 869 aa9.07□□□□□ -0.96
RPS3AP12-201ENST00000443616 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
RPS3AP12-201ENST00000443616 ZNF579Q8NAF0 562 aaKnown RBP8.98□□□□□ -0.97
RPS3AP12-201ENST00000443616 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
RPS3AP12-201ENST00000443616 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
RPS3AP12-201ENST00000443616 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
RPS3AP12-201ENST00000443616 POTEIP0CG38 1075 aa8.89□□□□□ -0.99
RPS3AP12-201ENST00000443616 PLEKHG5O94827 1062 aa8.84□□□□□ -0.99
RPS3AP12-201ENST00000443616 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
RPS3AP12-201ENST00000443616 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
RPS3AP12-201ENST00000443616 FKBP8Q14318 412 aa8.83□□□□□ -1
RPS3AP12-201ENST00000443616 LHX8Q68G74 356 aa8.82□□□□□ -1
RPS3AP12-201ENST00000443616 MIER1Q8N108 512 aa8.82□□□□□ -1
RPS3AP12-201ENST00000443616 PHF12Q96QT6 1004 aa8.81□□□□□ -1
RPS3AP12-201ENST00000443616 CCDC61Q9Y6R9 512 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms