RNA–Protein interactions for RNA: ENST00000443534.1

CUBNP2-201, Transcript of cubilin pseudogene 2, humanhuman

BASIC

Gene CUBNP2, Length 1,139 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP2-201ENST00000443534 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
CUBNP2-201ENST00000443534 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
CUBNP2-201ENST00000443534 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
CUBNP2-201ENST00000443534 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
CUBNP2-201ENST00000443534 FOXD1Q16676 465 aa19.5■□□□□ 0.71
CUBNP2-201ENST00000443534 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CUBNP2-201ENST00000443534 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
CUBNP2-201ENST00000443534 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
CUBNP2-201ENST00000443534 ADRA2BP18089 450 aa18.64■□□□□ 0.57
CUBNP2-201ENST00000443534 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
CUBNP2-201ENST00000443534 MSH5O43196 834 aa18.19■□□□□ 0.5
CUBNP2-201ENST00000443534 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
CUBNP2-201ENST00000443534 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
CUBNP2-201ENST00000443534 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
CUBNP2-201ENST00000443534 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CUBNP2-201ENST00000443534 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
CUBNP2-201ENST00000443534 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
CUBNP2-201ENST00000443534 KCNA4P22459 653 aa16.63■□□□□ 0.25
CUBNP2-201ENST00000443534 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
CUBNP2-201ENST00000443534 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
CUBNP2-201ENST00000443534 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
CUBNP2-201ENST00000443534 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
CUBNP2-201ENST00000443534 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
CUBNP2-201ENST00000443534 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
CUBNP2-201ENST00000443534 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
CUBNP2-201ENST00000443534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.08
CUBNP2-201ENST00000443534 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
CUBNP2-201ENST00000443534 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
CUBNP2-201ENST00000443534 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
CUBNP2-201ENST00000443534 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
CUBNP2-201ENST00000443534 ZBTB22O15209 634 aa15.31■□□□□ 0.04
CUBNP2-201ENST00000443534 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
CUBNP2-201ENST00000443534 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
CUBNP2-201ENST00000443534 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
CUBNP2-201ENST00000443534 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
CUBNP2-201ENST00000443534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
CUBNP2-201ENST00000443534 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
CUBNP2-201ENST00000443534 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
CUBNP2-201ENST00000443534 APLP2Q06481 763 aa14.97□□□□□ -0.01
CUBNP2-201ENST00000443534 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
CUBNP2-201ENST00000443534 CAPN15O75808 1086 aa14.86□□□□□ -0.03
CUBNP2-201ENST00000443534 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
CUBNP2-201ENST00000443534 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
CUBNP2-201ENST00000443534 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
CUBNP2-201ENST00000443534 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
CUBNP2-201ENST00000443534 POTEHQ6S545 545 aa14.75□□□□□ -0.05
CUBNP2-201ENST00000443534 DSG3P32926 999 aa14.66□□□□□ -0.06
CUBNP2-201ENST00000443534 ABCB7O75027 752 aa14.56□□□□□ -0.08
CUBNP2-201ENST00000443534 POLA2Q14181 598 aa14.5□□□□□ -0.09
CUBNP2-201ENST00000443534 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
CUBNP2-201ENST00000443534 FBLN2P98095 1184 aa14.16□□□□□ -0.14
CUBNP2-201ENST00000443534 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
CUBNP2-201ENST00000443534 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
CUBNP2-201ENST00000443534 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
CUBNP2-201ENST00000443534 NISCHQ9Y2I1 1504 aa13.91□□□□□ -0.18
CUBNP2-201ENST00000443534 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
CUBNP2-201ENST00000443534 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
CUBNP2-201ENST00000443534 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
CUBNP2-201ENST00000443534 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
CUBNP2-201ENST00000443534 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
CUBNP2-201ENST00000443534 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
CUBNP2-201ENST00000443534 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
CUBNP2-201ENST00000443534 FKBP8Q14318 412 aa13.66□□□□□ -0.22
CUBNP2-201ENST00000443534 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
CUBNP2-201ENST00000443534 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
CUBNP2-201ENST00000443534 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
CUBNP2-201ENST00000443534 PROM2Q8N271 834 aa13.57□□□□□ -0.24
CUBNP2-201ENST00000443534 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
CUBNP2-201ENST00000443534 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
CUBNP2-201ENST00000443534 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
CUBNP2-201ENST00000443534 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
CUBNP2-201ENST00000443534 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
CUBNP2-201ENST00000443534 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
CUBNP2-201ENST00000443534 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
CUBNP2-201ENST00000443534 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
CUBNP2-201ENST00000443534 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
CUBNP2-201ENST00000443534 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
CUBNP2-201ENST00000443534 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
CUBNP2-201ENST00000443534 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
CUBNP2-201ENST00000443534 HAX1O00165 279 aa13.08□□□□□ -0.32
CUBNP2-201ENST00000443534 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
CUBNP2-201ENST00000443534 MIER1Q8N108 512 aa13.04□□□□□ -0.32
CUBNP2-201ENST00000443534 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
CUBNP2-201ENST00000443534 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
CUBNP2-201ENST00000443534 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
CUBNP2-201ENST00000443534 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
CUBNP2-201ENST00000443534 EVX2Q03828 476 aa12.91□□□□□ -0.34
CUBNP2-201ENST00000443534 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
CUBNP2-201ENST00000443534 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
CUBNP2-201ENST00000443534 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
CUBNP2-201ENST00000443534 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
CUBNP2-201ENST00000443534 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
CUBNP2-201ENST00000443534 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
CUBNP2-201ENST00000443534 NUBP1P53384 320 aa12.75□□□□□ -0.37
CUBNP2-201ENST00000443534 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
CUBNP2-201ENST00000443534 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
CUBNP2-201ENST00000443534 PAK3O75914 559 aaPredicted RBP12.69□□□□□ -0.38
CUBNP2-201ENST00000443534 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CUBNP2-201ENST00000443534 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
CUBNP2-201ENST00000443534 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms