RNA–Protein interactions for RNA: ENST00000442649.1

AC099654.1-201, humanhuman

TSL 3 BASIC

Gene AC099654.1, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099654.1-201ENST00000442649 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
AC099654.1-201ENST00000442649 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
AC099654.1-201ENST00000442649 SENP3Q9H4L4 574 aaPredicted RBP25.05■■□□□ 1.6
AC099654.1-201ENST00000442649 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
AC099654.1-201ENST00000442649 FOXD1Q16676 465 aa23.41■■□□□ 1.34
AC099654.1-201ENST00000442649 POTEDQ86YR6 584 aa22.2■■□□□ 1.14
AC099654.1-201ENST00000442649 MSH5O43196 834 aa22.05■■□□□ 1.12
AC099654.1-201ENST00000442649 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
AC099654.1-201ENST00000442649 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
AC099654.1-201ENST00000442649 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
AC099654.1-201ENST00000442649 ADRA2BP18089 450 aa21.53■■□□□ 1.04
AC099654.1-201ENST00000442649 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
AC099654.1-201ENST00000442649 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
AC099654.1-201ENST00000442649 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
AC099654.1-201ENST00000442649 CACNB1Q02641 598 aaPredicted RBP19.22■□□□□ 0.67
AC099654.1-201ENST00000442649 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
AC099654.1-201ENST00000442649 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
AC099654.1-201ENST00000442649 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
AC099654.1-201ENST00000442649 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
AC099654.1-201ENST00000442649 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
AC099654.1-201ENST00000442649 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
AC099654.1-201ENST00000442649 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
AC099654.1-201ENST00000442649 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
AC099654.1-201ENST00000442649 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
AC099654.1-201ENST00000442649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
AC099654.1-201ENST00000442649 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
AC099654.1-201ENST00000442649 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
AC099654.1-201ENST00000442649 CAPN15O75808 1086 aa17.54■□□□□ 0.4
AC099654.1-201ENST00000442649 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
AC099654.1-201ENST00000442649 DSG3P32926 999 aa17.45■□□□□ 0.38
AC099654.1-201ENST00000442649 POTEHQ6S545 545 aa17.34■□□□□ 0.37
AC099654.1-201ENST00000442649 KCNA4P22459 653 aa17.25■□□□□ 0.35
AC099654.1-201ENST00000442649 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
AC099654.1-201ENST00000442649 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
AC099654.1-201ENST00000442649 ABCB7O75027 752 aa17.11■□□□□ 0.33
AC099654.1-201ENST00000442649 APLP2Q06481 763 aa17.08■□□□□ 0.32
AC099654.1-201ENST00000442649 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
AC099654.1-201ENST00000442649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
AC099654.1-201ENST00000442649 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
AC099654.1-201ENST00000442649 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
AC099654.1-201ENST00000442649 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
AC099654.1-201ENST00000442649 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
AC099654.1-201ENST00000442649 POLA2Q14181 598 aa16.57■□□□□ 0.24
AC099654.1-201ENST00000442649 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
AC099654.1-201ENST00000442649 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
AC099654.1-201ENST00000442649 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
AC099654.1-201ENST00000442649 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
AC099654.1-201ENST00000442649 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
AC099654.1-201ENST00000442649 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
AC099654.1-201ENST00000442649 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
AC099654.1-201ENST00000442649 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
AC099654.1-201ENST00000442649 SP7Q8TDD2 431 aaPredicted RBP16.06■□□□□ 0.16
AC099654.1-201ENST00000442649 PIP4P2Q8N4L2 257 aa16.01■□□□□ 0.15
AC099654.1-201ENST00000442649 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
AC099654.1-201ENST00000442649 HAX1O00165 279 aa15.86■□□□□ 0.13
AC099654.1-201ENST00000442649 ZBTB22O15209 634 aa15.83■□□□□ 0.12
AC099654.1-201ENST00000442649 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
AC099654.1-201ENST00000442649 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
AC099654.1-201ENST00000442649 FBLN2P98095 1184 aa15.65■□□□□ 0.1
AC099654.1-201ENST00000442649 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
AC099654.1-201ENST00000442649 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
AC099654.1-201ENST00000442649 SPDYE2Q495Y8 402 aa15.64■□□□□ 0.09
AC099654.1-201ENST00000442649 EVX2Q03828 476 aa15.59■□□□□ 0.09
AC099654.1-201ENST00000442649 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
AC099654.1-201ENST00000442649 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
AC099654.1-201ENST00000442649 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
AC099654.1-201ENST00000442649 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
AC099654.1-201ENST00000442649 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
AC099654.1-201ENST00000442649 SSUH2Q9Y2M2 353 aa15.38■□□□□ 0.05
AC099654.1-201ENST00000442649 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
AC099654.1-201ENST00000442649 CHADLQ6NUI6 762 aa15.28■□□□□ 0.04
AC099654.1-201ENST00000442649 GABBR2O75899 941 aa15.22■□□□□ 0.03
AC099654.1-201ENST00000442649 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
AC099654.1-201ENST00000442649 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
AC099654.1-201ENST00000442649 LHX8Q68G74 356 aa15.07■□□□□ 0
AC099654.1-201ENST00000442649 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
AC099654.1-201ENST00000442649 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
AC099654.1-201ENST00000442649 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
AC099654.1-201ENST00000442649 CLCN6P51797 869 aa14.76□□□□□ -0.05
AC099654.1-201ENST00000442649 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
AC099654.1-201ENST00000442649 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
AC099654.1-201ENST00000442649 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
AC099654.1-201ENST00000442649 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
AC099654.1-201ENST00000442649 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
AC099654.1-201ENST00000442649 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
AC099654.1-201ENST00000442649 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
AC099654.1-201ENST00000442649 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
AC099654.1-201ENST00000442649 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
AC099654.1-201ENST00000442649 PLSCR2Q9NRY7 297 aa14.51□□□□□ -0.09
AC099654.1-201ENST00000442649 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
AC099654.1-201ENST00000442649 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
AC099654.1-201ENST00000442649 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
AC099654.1-201ENST00000442649 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
AC099654.1-201ENST00000442649 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
AC099654.1-201ENST00000442649 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
AC099654.1-201ENST00000442649 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
AC099654.1-201ENST00000442649 MS4A3Q96HJ5 214 aa14.28□□□□□ -0.12
AC099654.1-201ENST00000442649 METRNQ9UJH8 293 aa14.24□□□□□ -0.13
AC099654.1-201ENST00000442649 POTEMA6NI47 508 aa14.23□□□□□ -0.13
AC099654.1-201ENST00000442649 ASTLQ6HA08 431 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms