RNA–Protein interactions for RNA: ENST00000442478.1

LINC00380-201, long intergenic non-protein coding RNA 380, humanhuman

TSL 2 BASIC

Gene LINC00380, Length 353 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00380-201ENST00000442478 AEBP2Q6ZN18 517 aaPredicted RBP36.23■■■■□ 3.39
LINC00380-201ENST00000442478 CHIC1Q5VXU3 224 aa33.87■■■■□ 3.01
LINC00380-201ENST00000442478 SENP3Q9H4L4 574 aaPredicted RBP31.01■■■□□ 2.55
LINC00380-201ENST00000442478 PHF23Q9BUL5 403 aaPredicted RBP30.55■■■□□ 2.48
LINC00380-201ENST00000442478 FOXD1Q16676 465 aa28.99■■■□□ 2.23
LINC00380-201ENST00000442478 POTEDQ86YR6 584 aa27.73■■■□□ 2.03
LINC00380-201ENST00000442478 MSH5O43196 834 aa27.34■■□□□ 1.97
LINC00380-201ENST00000442478 PIAS4Q8N2W9 510 aaPredicted RBP26.96■■□□□ 1.91
LINC00380-201ENST00000442478 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
LINC00380-201ENST00000442478 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
LINC00380-201ENST00000442478 ADRA2BP18089 450 aa26.55■■□□□ 1.84
LINC00380-201ENST00000442478 MAPK8IP2Q13387 824 aaPredicted RBP24.58■■□□□ 1.53
LINC00380-201ENST00000442478 DMRT2Q9Y5R5 561 aa24.48■■□□□ 1.51
LINC00380-201ENST00000442478 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
LINC00380-201ENST00000442478 CACNB1Q02641 598 aaPredicted RBP23.89■■□□□ 1.41
LINC00380-201ENST00000442478 DCAF8L1A6NGE4 600 aa23.62■■□□□ 1.37
LINC00380-201ENST00000442478 PPP4R3CPQ6ZMV5 832 aa23.4■■□□□ 1.34
LINC00380-201ENST00000442478 HOXD11P31277 338 aaPredicted RBP23.33■■□□□ 1.33
LINC00380-201ENST00000442478 RNF39Q9H2S5 420 aa23.27■■□□□ 1.32
LINC00380-201ENST00000442478 CNKSR2Q8WXI2 1034 aa23.08■■□□□ 1.29
LINC00380-201ENST00000442478 RNF216Q9NWF9 866 aaPredicted RBP23.01■■□□□ 1.27
LINC00380-201ENST00000442478 C1QBPQ07021 282 aaKnown RBP22.9■■□□□ 1.26
LINC00380-201ENST00000442478 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
LINC00380-201ENST00000442478 NCBP3Q53F19 620 aaKnown RBP22.32■■□□□ 1.16
LINC00380-201ENST00000442478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.31■■□□□ 1.16
LINC00380-201ENST00000442478 NPM3O75607 178 aaKnown RBP21.98■■□□□ 1.11
LINC00380-201ENST00000442478 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
LINC00380-201ENST00000442478 CAPN15O75808 1086 aa21.64■■□□□ 1.05
LINC00380-201ENST00000442478 POTEHQ6S545 545 aa21.62■■□□□ 1.05
LINC00380-201ENST00000442478 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
LINC00380-201ENST00000442478 DSG3P32926 999 aa21.6■■□□□ 1.05
LINC00380-201ENST00000442478 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
LINC00380-201ENST00000442478 SLC4A2P04920 1241 aa21.14■□□□□ 0.97
LINC00380-201ENST00000442478 ABCB7O75027 752 aa21.09■□□□□ 0.97
LINC00380-201ENST00000442478 APLP2Q06481 763 aa21.06■□□□□ 0.96
LINC00380-201ENST00000442478 KCNA4P22459 653 aa21.05■□□□□ 0.96
LINC00380-201ENST00000442478 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
LINC00380-201ENST00000442478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
LINC00380-201ENST00000442478 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
LINC00380-201ENST00000442478 SAMD1Q6SPF0 538 aaPredicted RBP20.76■□□□□ 0.91
LINC00380-201ENST00000442478 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
LINC00380-201ENST00000442478 POLA2Q14181 598 aa20.43■□□□□ 0.86
LINC00380-201ENST00000442478 CHRDL2Q6WN34 429 aa20.43■□□□□ 0.86
LINC00380-201ENST00000442478 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
LINC00380-201ENST00000442478 AKT1S1Q96B36 256 aa20.02■□□□□ 0.8
LINC00380-201ENST00000442478 SP7Q8TDD2 431 aaPredicted RBP19.98■□□□□ 0.79
LINC00380-201ENST00000442478 ATF5Q9Y2D1 282 aaPredicted RBP19.94■□□□□ 0.78
LINC00380-201ENST00000442478 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
LINC00380-201ENST00000442478 REM2Q8IYK8 340 aaPredicted RBP19.86■□□□□ 0.77
LINC00380-201ENST00000442478 PIP4P2Q8N4L2 257 aa19.82■□□□□ 0.76
LINC00380-201ENST00000442478 FOXD4L1Q9NU39 408 aa19.81■□□□□ 0.76
LINC00380-201ENST00000442478 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
LINC00380-201ENST00000442478 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
LINC00380-201ENST00000442478 HAX1O00165 279 aa19.68■□□□□ 0.74
LINC00380-201ENST00000442478 PITPNM1O00562 1244 aa19.65■□□□□ 0.74
LINC00380-201ENST00000442478 FXR2P51116 673 aaKnown RBP eCLIP19.58■□□□□ 0.72
LINC00380-201ENST00000442478 EVX2Q03828 476 aa19.35■□□□□ 0.69
LINC00380-201ENST00000442478 ZBTB22O15209 634 aa19.31■□□□□ 0.68
LINC00380-201ENST00000442478 SPDYE2BA6NHP3 402 aa19.26■□□□□ 0.67
LINC00380-201ENST00000442478 SPDYE6P0CI01 402 aa19.26■□□□□ 0.67
LINC00380-201ENST00000442478 SPDYE2Q495Y8 402 aa19.26■□□□□ 0.67
LINC00380-201ENST00000442478 ATXN8OSP0DMR3 200 aa19.22■□□□□ 0.67
LINC00380-201ENST00000442478 FBLN2P98095 1184 aa19.22■□□□□ 0.67
LINC00380-201ENST00000442478 PRKAR2AP13861 404 aaKnown RBP19.16■□□□□ 0.66
LINC00380-201ENST00000442478 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
LINC00380-201ENST00000442478 SPDYE1Q8NFV5 336 aaPredicted RBP19.1■□□□□ 0.65
LINC00380-201ENST00000442478 ZNF692Q9BU19 519 aaPredicted RBP18.99■□□□□ 0.63
LINC00380-201ENST00000442478 C19orf67A6NJJ6 358 aa18.97■□□□□ 0.63
LINC00380-201ENST00000442478 MKRN4PQ13434 485 aaPredicted RBP18.97■□□□□ 0.63
LINC00380-201ENST00000442478 SSUH2Q9Y2M2 353 aa18.92■□□□□ 0.62
LINC00380-201ENST00000442478 GABBR2O75899 941 aa18.88■□□□□ 0.61
LINC00380-201ENST00000442478 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
LINC00380-201ENST00000442478 LHX8Q68G74 356 aa18.75■□□□□ 0.59
LINC00380-201ENST00000442478 PRR29P0C7W0 189 aa18.73■□□□□ 0.59
LINC00380-201ENST00000442478 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
LINC00380-201ENST00000442478 CD44P16070 742 aaKnown RBP18.51■□□□□ 0.55
LINC00380-201ENST00000442478 FARP1Q9Y4F1 1045 aaPredicted RBP18.46■□□□□ 0.55
LINC00380-201ENST00000442478 POTEIP0CG38 1075 aa18.45■□□□□ 0.54
LINC00380-201ENST00000442478 CLCN6P51797 869 aa18.32■□□□□ 0.52
LINC00380-201ENST00000442478 DCBLD2Q96PD2 775 aa18.28■□□□□ 0.52
LINC00380-201ENST00000442478 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
LINC00380-201ENST00000442478 ZNF579Q8NAF0 562 aaKnown RBP18.15■□□□□ 0.5
LINC00380-201ENST00000442478 PLSCR2Q9NRY7 297 aa18.11■□□□□ 0.49
LINC00380-201ENST00000442478 CREBZFQ9NS37 354 aa18.08■□□□□ 0.48
LINC00380-201ENST00000442478 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
LINC00380-201ENST00000442478 GALR2O43603 387 aaPredicted RBP18.01■□□□□ 0.47
LINC00380-201ENST00000442478 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
LINC00380-201ENST00000442478 OTUD5Q96G74 571 aa17.9■□□□□ 0.46
LINC00380-201ENST00000442478 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
LINC00380-201ENST00000442478 PHF12Q96QT6 1004 aa17.86■□□□□ 0.45
LINC00380-201ENST00000442478 POTEB2H3BUK9 544 aa17.84■□□□□ 0.45
LINC00380-201ENST00000442478 SPDYE4A6NLX3 237 aa17.8■□□□□ 0.44
LINC00380-201ENST00000442478 NPM1P06748 294 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00380-201ENST00000442478 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
LINC00380-201ENST00000442478 POTEMA6NI47 508 aa17.69■□□□□ 0.42
LINC00380-201ENST00000442478 MNX1P50219 401 aaPredicted RBP17.66■□□□□ 0.42
LINC00380-201ENST00000442478 POTEGQ6S5H5 508 aa17.62■□□□□ 0.41
LINC00380-201ENST00000442478 MS4A3Q96HJ5 214 aa17.59■□□□□ 0.41
LINC00380-201ENST00000442478 METRNQ9UJH8 293 aa17.58■□□□□ 0.4
LINC00380-201ENST00000442478 ASTLQ6HA08 431 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms