RNA–Protein interactions for RNA: ENST00000442032.2

HMGCR-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 268 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-203ENST00000442032 AEBP2Q6ZN18 517 aaPredicted RBP46.8■■■■■ 5.08
HMGCR-203ENST00000442032 CHIC1Q5VXU3 224 aa45.2■■■■■ 4.83
HMGCR-203ENST00000442032 SENP3Q9H4L4 574 aaPredicted RBP39.81■■■■□ 3.96
HMGCR-203ENST00000442032 PHF23Q9BUL5 403 aaPredicted RBP39.69■■■■□ 3.94
HMGCR-203ENST00000442032 FOXD1Q16676 465 aa37.01■■■■□ 3.52
HMGCR-203ENST00000442032 PLPPR3Q6T4P5 718 aa36.5■■■■□ 3.43
HMGCR-203ENST00000442032 PPP6R1Q9UPN7 881 aa35.21■■■■□ 3.23
HMGCR-203ENST00000442032 ADRA2BP18089 450 aa35.18■■■■□ 3.22
HMGCR-203ENST00000442032 PIAS4Q8N2W9 510 aaPredicted RBP34.81■■■■□ 3.16
HMGCR-203ENST00000442032 MSH5O43196 834 aa34.34■■■■□ 3.09
HMGCR-203ENST00000442032 SCAF1Q9H7N4 1312 aaKnown RBP32.2■■■□□ 2.74
HMGCR-203ENST00000442032 POTEDQ86YR6 584 aa32.18■■■□□ 2.74
HMGCR-203ENST00000442032 PPP4R3CPQ6ZMV5 832 aa32.11■■■□□ 2.73
HMGCR-203ENST00000442032 MAPK8IP2Q13387 824 aaPredicted RBP32.09■■■□□ 2.73
HMGCR-203ENST00000442032 DMRT2Q9Y5R5 561 aa31.67■■■□□ 2.66
HMGCR-203ENST00000442032 CNKSR2Q8WXI2 1034 aa31.31■■■□□ 2.6
HMGCR-203ENST00000442032 NCBP3Q53F19 620 aaKnown RBP31.13■■■□□ 2.57
HMGCR-203ENST00000442032 RNF216Q9NWF9 866 aaPredicted RBP30.82■■■□□ 2.52
HMGCR-203ENST00000442032 HOXD11P31277 338 aaPredicted RBP30.81■■■□□ 2.52
HMGCR-203ENST00000442032 KCNA4P22459 653 aa30.77■■■□□ 2.52
HMGCR-203ENST00000442032 NPM3O75607 178 aaKnown RBP30.64■■■□□ 2.5
HMGCR-203ENST00000442032 DCAF8L1A6NGE4 600 aa30.46■■■□□ 2.47
HMGCR-203ENST00000442032 DNAJC5BQ9UF47 199 aa29.72■■■□□ 2.35
HMGCR-203ENST00000442032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.45■■■□□ 2.31
HMGCR-203ENST00000442032 RNF39Q9H2S5 420 aa29.35■■■□□ 2.29
HMGCR-203ENST00000442032 SLC4A1APQ9BWU0 796 aaKnown RBP29.23■■■□□ 2.27
HMGCR-203ENST00000442032 SLC4A2P04920 1241 aa29.05■■■□□ 2.24
HMGCR-203ENST00000442032 CACNB1Q02641 598 aaPredicted RBP29.05■■■□□ 2.24
HMGCR-203ENST00000442032 C1QBPQ07021 282 aaKnown RBP28.98■■■□□ 2.23
HMGCR-203ENST00000442032 U3KPZ7 1027 aaPredicted RBP28.86■■■□□ 2.21
HMGCR-203ENST00000442032 FOXD4L1Q9NU39 408 aa28.46■■■□□ 2.15
HMGCR-203ENST00000442032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.33■■■□□ 2.13
HMGCR-203ENST00000442032 MYCNP04198 464 aaPredicted RBP28.33■■■□□ 2.13
HMGCR-203ENST00000442032 HNRNPUL2Q1KMD3 747 aaKnown RBP28.33■■■□□ 2.13
HMGCR-203ENST00000442032 ZBTB22O15209 634 aa28.28■■■□□ 2.12
HMGCR-203ENST00000442032 SPINK5Q9NQ38 1064 aaPredicted RBP28.23■■■□□ 2.11
HMGCR-203ENST00000442032 SAMD1Q6SPF0 538 aaPredicted RBP28.19■■■□□ 2.1
HMGCR-203ENST00000442032 CAPN15O75808 1086 aa28.18■■■□□ 2.1
HMGCR-203ENST00000442032 APLP2Q06481 763 aa28.17■■■□□ 2.1
HMGCR-203ENST00000442032 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
HMGCR-203ENST00000442032 ZNF219Q9P2Y4 722 aaPredicted RBP27.85■■■□□ 2.05
HMGCR-203ENST00000442032 EHMT2Q96KQ7 1210 aa27.84■■■□□ 2.05
HMGCR-203ENST00000442032 DSG3P32926 999 aa27.76■■■□□ 2.03
HMGCR-203ENST00000442032 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.02
HMGCR-203ENST00000442032 ATF5Q9Y2D1 282 aaPredicted RBP27.62■■■□□ 2.01
HMGCR-203ENST00000442032 ABCB7O75027 752 aa27.6■■■□□ 2.01
HMGCR-203ENST00000442032 ATXN8OSP0DMR3 200 aa27.49■■□□□ 1.99
HMGCR-203ENST00000442032 POLA2Q14181 598 aa27.33■■□□□ 1.97
HMGCR-203ENST00000442032 ZBTB12Q9Y330 459 aaPredicted RBP26.81■■□□□ 1.88
HMGCR-203ENST00000442032 FBLN2P98095 1184 aa26.53■■□□□ 1.84
HMGCR-203ENST00000442032 RBM42Q9BTD8 480 aaKnown RBP26.49■■□□□ 1.83
HMGCR-203ENST00000442032 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
HMGCR-203ENST00000442032 MKRN4PQ13434 485 aaPredicted RBP26.37■■□□□ 1.81
HMGCR-203ENST00000442032 AKT1S1Q96B36 256 aa26.05■■□□□ 1.76
HMGCR-203ENST00000442032 SPDYE2BA6NHP3 402 aa26.04■■□□□ 1.76
HMGCR-203ENST00000442032 SPDYE6P0CI01 402 aa26.04■■□□□ 1.76
HMGCR-203ENST00000442032 SPDYE2Q495Y8 402 aa26.04■■□□□ 1.76
HMGCR-203ENST00000442032 ZNF692Q9BU19 519 aaPredicted RBP25.91■■□□□ 1.74
HMGCR-203ENST00000442032 REM2Q8IYK8 340 aaPredicted RBP25.81■■□□□ 1.72
HMGCR-203ENST00000442032 SSUH2Q9Y2M2 353 aa25.75■■□□□ 1.71
HMGCR-203ENST00000442032 CHRDL2Q6WN34 429 aa25.6■■□□□ 1.69
HMGCR-203ENST00000442032 SPDYE4A6NLX3 237 aa25.57■■□□□ 1.68
HMGCR-203ENST00000442032 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
HMGCR-203ENST00000442032 PITPNM1O00562 1244 aa25.52■■□□□ 1.68
HMGCR-203ENST00000442032 SPDYE1Q8NFV5 336 aaPredicted RBP25.42■■□□□ 1.66
HMGCR-203ENST00000442032 CLEC11AQ9Y240 323 aa25.39■■□□□ 1.66
HMGCR-203ENST00000442032 POTEHQ6S545 545 aa25.38■■□□□ 1.65
HMGCR-203ENST00000442032 PIP4P2Q8N4L2 257 aa25.16■■□□□ 1.62
HMGCR-203ENST00000442032 FKBP8Q14318 412 aa25.13■■□□□ 1.61
HMGCR-203ENST00000442032 FXR2P51116 673 aaKnown RBP eCLIP25.12■■□□□ 1.61
HMGCR-203ENST00000442032 PRR29P0C7W0 189 aa25.06■■□□□ 1.6
HMGCR-203ENST00000442032 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
HMGCR-203ENST00000442032 PROM2Q8N271 834 aa24.98■■□□□ 1.59
HMGCR-203ENST00000442032 PRKAR2AP13861 404 aaKnown RBP24.89■■□□□ 1.58
HMGCR-203ENST00000442032 CHADLQ6NUI6 762 aa24.81■■□□□ 1.56
HMGCR-203ENST00000442032 CREBZFQ9NS37 354 aa24.58■■□□□ 1.53
HMGCR-203ENST00000442032 HAX1O00165 279 aa24.55■■□□□ 1.52
HMGCR-203ENST00000442032 FARP1Q9Y4F1 1045 aaPredicted RBP24.48■■□□□ 1.51
HMGCR-203ENST00000442032 FBXO3Q9UK99 471 aa24.36■■□□□ 1.49
HMGCR-203ENST00000442032 MIER1Q8N108 512 aa24.35■■□□□ 1.49
HMGCR-203ENST00000442032 C19orf67A6NJJ6 358 aa24.29■■□□□ 1.48
HMGCR-203ENST00000442032 PLEKHG5O94827 1062 aa24.26■■□□□ 1.47
HMGCR-203ENST00000442032 PLCD3Q8N3E9 789 aa24.26■■□□□ 1.47
HMGCR-203ENST00000442032 EVX2Q03828 476 aa24.25■■□□□ 1.47
HMGCR-203ENST00000442032 MNX1P50219 401 aaPredicted RBP24.22■■□□□ 1.47
HMGCR-203ENST00000442032 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
HMGCR-203ENST00000442032 SP7Q8TDD2 431 aaPredicted RBP24.16■■□□□ 1.46
HMGCR-203ENST00000442032 CD44P16070 742 aaKnown RBP24.15■■□□□ 1.46
HMGCR-203ENST00000442032 VASPP50552 380 aaPredicted RBP24.02■■□□□ 1.44
HMGCR-203ENST00000442032 ZBTB47Q9UFB7 747 aaPredicted RBP23.97■■□□□ 1.43
HMGCR-203ENST00000442032 ZRANB1Q9UGI0 708 aa23.95■■□□□ 1.42
HMGCR-203ENST00000442032 PAK3O75914 559 aaPredicted RBP23.94■■□□□ 1.42
HMGCR-203ENST00000442032 KLHL34Q8N239 644 aa23.82■■□□□ 1.4
HMGCR-203ENST00000442032 TSPYL2Q9H2G4 693 aaPredicted RBP23.81■■□□□ 1.4
HMGCR-203ENST00000442032 GABBR2O75899 941 aa23.77■■□□□ 1.4
HMGCR-203ENST00000442032 ZNF579Q8NAF0 562 aaKnown RBP23.77■■□□□ 1.4
HMGCR-203ENST00000442032 RASEFQ8IZ41 740 aa23.75■■□□□ 1.39
HMGCR-203ENST00000442032 NUBP1P53384 320 aa23.71■■□□□ 1.39
HMGCR-203ENST00000442032 PHF12Q96QT6 1004 aa23.67■■□□□ 1.38
HMGCR-203ENST00000442032 IFNLR1Q8IU57 520 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms